RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 RELL1Q8IUW5 271 aa6.78□□□□□ -1.32
KTN1-222ENST00000555506 SMG8Q8ND04 991 aaKnown RBP6.78□□□□□ -1.32
KTN1-222ENST00000555506 SUGCTQ9HAC7 445 aa6.78□□□□□ -1.32
KTN1-222ENST00000555506 RAXQ9Y2V3 346 aa6.78□□□□□ -1.32
KTN1-222ENST00000555506 DHX15O43143 795 aaKnown RBP6.77□□□□□ -1.33
KTN1-222ENST00000555506 DRD2P14416 443 aa6.77□□□□□ -1.33
KTN1-222ENST00000555506 DNAJA1P31689 397 aaKnown RBP6.77□□□□□ -1.33
KTN1-222ENST00000555506 ARID5AQ03989 594 aa6.77□□□□□ -1.33
KTN1-222ENST00000555506 PAK2Q13177 524 aa6.77□□□□□ -1.33
KTN1-222ENST00000555506 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
KTN1-222ENST00000555506 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.77□□□□□ -1.33
KTN1-222ENST00000555506 VPS37DQ86XT2 251 aa6.77□□□□□ -1.33
KTN1-222ENST00000555506 C12orf50Q8NA57 414 aaPredicted RBP6.77□□□□□ -1.33
KTN1-222ENST00000555506 TMEM74Q96NL1 305 aa6.77□□□□□ -1.33
KTN1-222ENST00000555506 EIF4EBP3O60516 100 aaPredicted RBP6.76□□□□□ -1.33
KTN1-222ENST00000555506 BMP3P12645 472 aa6.76□□□□□ -1.33
KTN1-222ENST00000555506 ATP2B1P20020 1258 aa6.76□□□□□ -1.33
KTN1-222ENST00000555506 GPRASP2Q96D09 838 aa6.76□□□□□ -1.33
KTN1-222ENST00000555506 CORO1BQ9BR76 489 aa6.76□□□□□ -1.33
KTN1-222ENST00000555506 SPON2Q9BUD6 331 aa6.76□□□□□ -1.33
KTN1-222ENST00000555506 CYP4F12Q9HCS2 524 aa6.76□□□□□ -1.33
KTN1-222ENST00000555506 STOML1Q9UBI4 398 aa6.76□□□□□ -1.33
KTN1-222ENST00000555506 GPN3Q9UHW5 284 aaPredicted RBP6.76□□□□□ -1.33
KTN1-222ENST00000555506 F6X3S4 739 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 ENC1O14682 589 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 CELA3AP09093 270 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 FSTP19883 344 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 SSTR4P31391 388 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 GBP2P32456 591 aaPredicted RBP6.75□□□□□ -1.33
KTN1-222ENST00000555506 SGO2Q562F6 1265 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 KIAA0825Q8IV33 1275 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 FAM20CQ8IXL6 584 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 DDX54Q8TDD1 881 aaKnown RBP6.75□□□□□ -1.33
KTN1-222ENST00000555506 ARMC5Q96C12 935 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 NECAB3Q96P71 396 aaPredicted RBP6.75□□□□□ -1.33
KTN1-222ENST00000555506 ADAMTS1Q9UHI8 967 aa6.75□□□□□ -1.33
KTN1-222ENST00000555506 HMX2A2RU54 273 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 MINDY4BA8MYZ0 360 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 GAS2O43903 313 aaKnown RBP6.74□□□□□ -1.33
KTN1-222ENST00000555506 EIF4A3P38919 411 aaKnown RBP6.74□□□□□ -1.33
KTN1-222ENST00000555506 LIG3P49916 1009 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 SOX4Q06945 474 aaPredicted RBP6.74□□□□□ -1.33
KTN1-222ENST00000555506 AP3B2Q13367 1082 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 MAP3K11Q16584 847 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 TRIM42Q8IWZ5 723 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 PHC3Q8NDX5 983 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 RASGRP4Q8TDF6 673 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 RHOVQ96L33 236 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 C7orf69Q9H7B7 122 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 TMEM39AQ9NV64 488 aa6.74□□□□□ -1.33
KTN1-222ENST00000555506 ADH5P11766 374 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 ATF4P18848 351 aaPredicted RBP6.73□□□□□ -1.33
KTN1-222ENST00000555506 GP2P55259 537 aaKnown RBP6.73□□□□□ -1.33
KTN1-222ENST00000555506 C2CD4AQ8NCU7 369 aaPredicted RBP6.73□□□□□ -1.33
KTN1-222ENST00000555506 STK35Q8TDR2 534 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 SPATA32Q96LK8 384 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 ZC3H12CQ9C0D7 883 aaKnown RBP6.73□□□□□ -1.33
KTN1-222ENST00000555506 KCNF1Q9H3M0 494 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 KCNQ5Q9NR82 932 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 HIF3AQ9Y2N7 669 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 OAS3Q9Y6K5 1087 aaKnown RBP6.73□□□□□ -1.33
KTN1-222ENST00000555506 FGRP09769 529 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 GTF2F1P35269 517 aaKnown RBP eCLIP6.73□□□□□ -1.33
KTN1-222ENST00000555506 PDE3AQ14432 1141 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 TTBK2Q6IQ55 1244 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 BEND4Q6ZU67 534 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 MCF2L2Q86YR7 1114 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 CLEC10AQ8IUN9 316 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 ZNF296Q8WUU4 475 aaPredicted RBP6.73□□□□□ -1.33
KTN1-222ENST00000555506 DHX38Q92620 1227 aaKnown RBP6.73□□□□□ -1.33
KTN1-222ENST00000555506 WDR89Q96FK6 387 aaPredicted RBP6.73□□□□□ -1.33
KTN1-222ENST00000555506 FAM83CQ9BQN1 747 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 WDR18Q9BV38 432 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 CCDC86Q9H6F5 360 aaKnown RBP6.73□□□□□ -1.33
KTN1-222ENST00000555506 TLR6Q9Y2C9 796 aa6.73□□□□□ -1.33
KTN1-222ENST00000555506 AOC2O75106 756 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 PAGE1O75459 146 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 IGLV1-40P01703 118 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 GSTP1P09211 210 aaKnown RBP6.72□□□□□ -1.33
KTN1-222ENST00000555506 LIG1P18858 919 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 MAP4P27816 1152 aaKnown RBP6.72□□□□□ -1.33
KTN1-222ENST00000555506 RPS26P62854 115 aaKnown RBP6.72□□□□□ -1.33
KTN1-222ENST00000555506 PPP2R3AQ06190 1150 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 AKAP4Q5JQC9 854 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 CDPF1Q6NVV7 123 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 FBXL19Q6PCT2 694 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 AGMOQ6ZNB7 445 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 PDZD3Q86UT5 571 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.72□□□□□ -1.33
KTN1-222ENST00000555506 RAD18Q9NS91 495 aa6.72□□□□□ -1.33
KTN1-222ENST00000555506 ZNF862O60290 1169 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 PF4P02776 101 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 CD97P48960 835 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 LMNB2Q03252 620 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 NFIAQ12857 509 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 CAMK2GQ13555 558 aaPredicted RBP6.71□□□□□ -1.34
KTN1-222ENST00000555506 HP1BP3Q5SSJ5 553 aaPredicted RBP6.71□□□□□ -1.34
KTN1-222ENST00000555506 PCNX4Q63HM2 1172 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 SULF2Q8IWU5 870 aa6.71□□□□□ -1.34
KTN1-222ENST00000555506 FBLIM1Q8WUP2 373 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms