RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 USP5P45974 858 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 HIRAP54198 1017 aaPredicted RBP9.66□□□□□ -0.86
LINC01397-201ENST00000554808 RHBDL3P58872 404 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 ANGEL2Q5VTE6 544 aaKnown RBP9.66□□□□□ -0.86
LINC01397-201ENST00000554808 ADGRA1Q86SQ6 560 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 FAM151AQ8WW52 585 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 NACAP1Q9BZK3 213 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 VEZTQ9HBM0 779 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 CLEC11AQ9Y240 323 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 MBD4O95243 580 aa9.65□□□□□ -0.86
LINC01397-201ENST00000554808 CHMLP26374 656 aa9.65□□□□□ -0.86
LINC01397-201ENST00000554808 NMIQ13287 307 aaPredicted RBP9.65□□□□□ -0.86
LINC01397-201ENST00000554808 CWC27Q6UX04 472 aaKnown RBP9.65□□□□□ -0.86
LINC01397-201ENST00000554808 KRT26Q7Z3Y9 468 aa9.65□□□□□ -0.86
LINC01397-201ENST00000554808 MIGA1Q8NAN2 632 aa9.65□□□□□ -0.86
LINC01397-201ENST00000554808 SH3RF3Q8TEJ3 882 aaPredicted RBP9.65□□□□□ -0.86
LINC01397-201ENST00000554808 OSBP2Q969R2 916 aa9.65□□□□□ -0.86
LINC01397-201ENST00000554808 PUS7LQ9H0K6 701 aaKnown RBP9.65□□□□□ -0.86
LINC01397-201ENST00000554808 ARPP21Q9UBL0 812 aaPredicted RBP9.65□□□□□ -0.86
LINC01397-201ENST00000554808 FLT1P17948 1338 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 A0A0D9SFI3 127 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 CLRN2A0PK11 232 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 PATL2C9JE40 543 aaKnown RBP9.64□□□□□ -0.87
LINC01397-201ENST00000554808 EPB41L2O43491 1005 aaKnown RBP9.64□□□□□ -0.87
LINC01397-201ENST00000554808 WDHD1O75717 1129 aaPredicted RBP9.64□□□□□ -0.87
LINC01397-201ENST00000554808 HLA-DOAP06340 250 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 SUPT20HL1Q3ZLR7 823 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 TTC6Q86TZ1 520 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 LCORLQ8N3X6 602 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 TGFBRAP1Q8WUH2 860 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 STRBPQ96SI9 672 aaKnown RBP9.64□□□□□ -0.87
LINC01397-201ENST00000554808 OSBPL5Q9H0X9 879 aaPredicted RBP9.64□□□□□ -0.87
LINC01397-201ENST00000554808 DEFB129Q9H1M3 183 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 SLC4A4Q9Y6R1 1079 aa9.64□□□□□ -0.87
LINC01397-201ENST00000554808 MYH6P13533 1939 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 UNCXA6NJT0 531 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 TCP10L2B9ZVM9 353 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 M0R2C6 588 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 SGSM2O43147 1006 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 REC8O95072 547 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 POTEIP0CG38 1075 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 POTEJP0CG39 1038 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 NT5C2P49902 561 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 DYNLL1P63167 89 aaKnown RBP9.63□□□□□ -0.87
LINC01397-201ENST00000554808 FKBP1BP68106 108 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 RASA3Q14644 834 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 ALX1Q15699 326 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 DCAF15Q66K64 600 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 KIAA1211Q6ZU35 1233 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 FAM227BQ96M60 508 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 DSCC1Q9BVC3 393 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 NAPBQ9H115 298 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 EHD4Q9H223 541 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 ARMT1Q9H993 441 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 DCP1AQ9NPI6 582 aaPredicted RBP9.63□□□□□ -0.87
LINC01397-201ENST00000554808 HERC5Q9UII4 1024 aaKnown RBP9.63□□□□□ -0.87
LINC01397-201ENST00000554808 PCDHAC2Q9Y5I4 1007 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 CNTNAP1P78357 1384 aa9.63□□□□□ -0.87
LINC01397-201ENST00000554808 PPP1R12BO60237 982 aaPredicted RBP9.62□□□□□ -0.87
LINC01397-201ENST00000554808 TBC1D12O60347 775 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 SLC3A2P08195 630 aaKnown RBP9.62□□□□□ -0.87
LINC01397-201ENST00000554808 PCP11498 1178 aaKnown RBP9.62□□□□□ -0.87
LINC01397-201ENST00000554808 TDO2P48775 406 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 PICALMQ13492 652 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 SBK1Q52WX2 424 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 ZSCAN29Q8IWY8 852 aaPredicted RBP9.62□□□□□ -0.87
LINC01397-201ENST00000554808 CSRNP1Q96S65 589 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 SEC62Q99442 399 aaKnown RBP9.62□□□□□ -0.87
LINC01397-201ENST00000554808 ESYT1Q9BSJ8 1104 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 ZNF287Q9HBT7 754 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 PI4KBQ9UBF8 816 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 FAM198AQ9UFP1 575 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 MKRN1Q9UHC7 482 aaKnown RBP9.62□□□□□ -0.87
LINC01397-201ENST00000554808 CTNNA3Q9UI47 895 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 ROBO3Q96MS0 1386 aa9.62□□□□□ -0.87
LINC01397-201ENST00000554808 GSG1L2A8MUP6 293 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 APPP05067 770 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 POLR3DP05423 398 aaPredicted RBP9.61□□□□□ -0.87
LINC01397-201ENST00000554808 HSPD1P10809 573 aaKnown RBP9.61□□□□□ -0.87
LINC01397-201ENST00000554808 TCP10Q12799 353 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 NFIAQ12857 509 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 MAP1SQ66K74 1059 aaPredicted RBP9.61□□□□□ -0.87
LINC01397-201ENST00000554808 ZNF589Q86UQ0 364 aaPredicted RBP9.61□□□□□ -0.87
LINC01397-201ENST00000554808 SKAP1Q86WV1 359 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 FOXP4Q8IVH2 680 aaPredicted RBP9.61□□□□□ -0.87
LINC01397-201ENST00000554808 MAPKAPK5Q8IW41 473 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 IFNL3Q8IZI9 196 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 SDR42E1Q8WUS8 393 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 TRIM34Q9BYJ4 488 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 DDX4Q9NQI0 724 aaKnown RBP9.61□□□□□ -0.87
LINC01397-201ENST00000554808 MCM9Q9NXL9 1143 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 SWAP70Q9UH65 585 aa9.61□□□□□ -0.87
LINC01397-201ENST00000554808 ASTN2O75129 1339 aaPredicted RBP9.6□□□□□ -0.87
LINC01397-201ENST00000554808 PASKQ96RG2 1323 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
LINC01397-201ENST00000554808 IREB2P48200 963 aaKnown RBP9.6□□□□□ -0.87
LINC01397-201ENST00000554808 CACNB3P54284 484 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 ARMC9Q7Z3E5 817 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 USP48Q86UV5 1035 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 METTL16Q86W50 562 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms