RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 C5P01031 1676 aa6.66□□□□□ -1.34
ATXN3-229ENST00000554672 POLRMTO00411 1230 aaKnown RBP6.66□□□□□ -1.34
ATXN3-229ENST00000554672 FOXN1O15353 648 aa6.66□□□□□ -1.34
ATXN3-229ENST00000554672 ADH6P28332 368 aa6.66□□□□□ -1.34
ATXN3-229ENST00000554672 CRKLP46109 303 aaKnown RBP6.66□□□□□ -1.34
ATXN3-229ENST00000554672 PLEKHO1Q53GL0 409 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-229ENST00000554672 CDCA8Q53HL2 280 aa6.66□□□□□ -1.34
ATXN3-229ENST00000554672 ZNF468Q5VIY5 522 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-229ENST00000554672 MDFIQ99750 246 aa6.66□□□□□ -1.34
ATXN3-229ENST00000554672 AVENQ9NQS1 362 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-229ENST00000554672 MARK1Q9P0L2 795 aa6.66□□□□□ -1.34
ATXN3-229ENST00000554672 ZNF232Q9UNY5 417 aa6.66□□□□□ -1.34
ATXN3-229ENST00000554672 GJA3Q9Y6H8 435 aa6.66□□□□□ -1.34
ATXN3-229ENST00000554672 USP42Q9H9J4 1324 aaKnown RBP6.66□□□□□ -1.34
ATXN3-229ENST00000554672 KDRP35968 1356 aa6.66□□□□□ -1.34
ATXN3-229ENST00000554672 WDR90Q96KV7 1748 aa6.65□□□□□ -1.34
ATXN3-229ENST00000554672 SERTM1A2A2V5 107 aa6.65□□□□□ -1.34
ATXN3-229ENST00000554672 H0YIN7 160 aa6.65□□□□□ -1.34
ATXN3-229ENST00000554672 C21orf2O43822 256 aa6.65□□□□□ -1.34
ATXN3-229ENST00000554672 PTCD1O75127 700 aaKnown RBP6.65□□□□□ -1.34
ATXN3-229ENST00000554672 MTHFSP49914 203 aa6.65□□□□□ -1.34
ATXN3-229ENST00000554672 AMOTQ4VCS5 1084 aa6.65□□□□□ -1.34
ATXN3-229ENST00000554672 CHSY3Q70JA7 882 aa6.65□□□□□ -1.34
ATXN3-229ENST00000554672 LARGE2Q8N3Y3 721 aa6.65□□□□□ -1.34
ATXN3-229ENST00000554672 PALM3A6NDB9 673 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-229ENST00000554672 SFI1A8K8P3 1242 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 M0R2N6 131 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 SERPINB2P05120 415 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 ATP1A2P50993 1020 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 SFSWAPQ12872 951 aaKnown RBP6.64□□□□□ -1.35
ATXN3-229ENST00000554672 LAMC2Q13753 1193 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 USPL1Q5W0Q7 1092 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 INTS5Q6P9B9 1019 aaKnown RBP6.64□□□□□ -1.35
ATXN3-229ENST00000554672 C2CD5Q86YS7 1000 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 SIX5Q8N196 739 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 TSEN2Q8NCE0 465 aaKnown RBP6.64□□□□□ -1.35
ATXN3-229ENST00000554672 TFIP11Q9UBB9 837 aaKnown RBP6.64□□□□□ -1.35
ATXN3-229ENST00000554672 POLKQ9UBT6 870 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 PRR12Q9ULL5 1215 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 HCN4Q9Y3Q4 1203 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 KDM6AO15550 1401 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-229ENST00000554672 NCAPD2Q15021 1401 aa6.64□□□□□ -1.35
ATXN3-229ENST00000554672 NFKBIEO00221 500 aa6.63□□□□□ -1.35
ATXN3-229ENST00000554672 GNB5O14775 395 aa6.63□□□□□ -1.35
ATXN3-229ENST00000554672 LBX1P52954 281 aa6.63□□□□□ -1.35
ATXN3-229ENST00000554672 HIRAP54198 1017 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-229ENST00000554672 EIF4A2Q14240 407 aaKnown RBP6.63□□□□□ -1.35
ATXN3-229ENST00000554672 NFIXQ14938 502 aa6.63□□□□□ -1.35
ATXN3-229ENST00000554672 GLMNQ92990 594 aa6.63□□□□□ -1.35
ATXN3-229ENST00000554672 ABHD8Q96I13 439 aa6.63□□□□□ -1.35
ATXN3-229ENST00000554672 ZNF594Q96JF6 807 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-229ENST00000554672 SLC30A3Q99726 388 aa6.63□□□□□ -1.35
ATXN3-229ENST00000554672 NARFQ9UHQ1 456 aa6.63□□□□□ -1.35
ATXN3-229ENST00000554672 TOGARAM1Q9Y4F4 1720 aa6.63□□□□□ -1.35
ATXN3-229ENST00000554672 UBR3Q6ZT12 1888 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 CNTNAP1P78357 1384 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 IQCA1LA6NCM1 817 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 TMEM88BA6NKF7 163 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 ADAM23O75077 832 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 PSMA6P60900 246 aaKnown RBP6.62□□□□□ -1.35
ATXN3-229ENST00000554672 MLLT1Q03111 559 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-229ENST00000554672 TMEM132AQ24JP5 1023 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 C1orf53Q5VUE5 145 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 ZNF530Q6P9A1 599 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-229ENST00000554672 SYT9Q86SS6 491 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 ALYREFQ86V81 257 aaKnown RBP6.62□□□□□ -1.35
ATXN3-229ENST00000554672 LDHDQ86WU2 507 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 ZNF280CQ8ND82 737 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 TRIM11Q96F44 468 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 HSH2DQ96JZ2 352 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 PHACTR1Q9C0D0 580 aa6.62□□□□□ -1.35
ATXN3-229ENST00000554672 MAFBQ9Y5Q3 323 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-229ENST00000554672 GPC6Q9Y625 555 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-229ENST00000554672 SOS1Q07889 1333 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-229ENST00000554672 PASKQ96RG2 1323 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 DDNO94850 711 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-229ENST00000554672 PDE6BP35913 854 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 RGS19P49795 217 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 MAP2K1Q02750 393 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-229ENST00000554672 DEFB115Q30KQ5 88 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 C1orf141Q5JVX7 400 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 DNAJC10Q8IXB1 793 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 RHPN1Q8TCX5 695 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 ZNF622Q969S3 477 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATXN3-229ENST00000554672 BRIP1Q9BX63 1249 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 MAP2P11137 1827 aaKnown RBP6.61□□□□□ -1.35
ATXN3-229ENST00000554672 TAF1LQ8IZX4 1826 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 C4AP0C0L4 1744 aa6.61□□□□□ -1.35
ATXN3-229ENST00000554672 KIF13BQ9NQT8 1826 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 ELOA3CA0A087WX78 387 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-229ENST00000554672 A0A087WZG4 1122 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 RASSF10A6NK89 507 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 CCDC85CA6NKD9 419 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 ELOA3DA6NLF2 546 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-229ENST00000554672 C1QTNF9BB2RNN3 333 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 HSPA8P11142 646 aaKnown RBP6.6□□□□□ -1.35
ATXN3-229ENST00000554672 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-229ENST00000554672 RASA1P20936 1047 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 ELOA3BQ3SY89 546 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 SOGA3Q5TF21 947 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms