RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 YY1AP1Q9H869 796 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 FANCLQ9NW38 375 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 PLEKHG2Q9H7P9 1386 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 ZNF213O14771 459 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 ARHGAP6O43182 974 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 VPS37DQ86XT2 251 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 TBC1D10CQ8IV04 446 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 TMEM139Q8IV31 216 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 RGS22Q8NE09 1264 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 DCAF5Q96JK2 942 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 PDE11AQ9HCR9 933 aa19.4■□□□□ 0.7
PPP4R3A-202ENST00000554390 CCDC151A5D8V7 595 aa19.39■□□□□ 0.7
PPP4R3A-202ENST00000554390 TXLNAP40222 546 aa19.39■□□□□ 0.7
PPP4R3A-202ENST00000554390 SYKP43405 635 aa19.39■□□□□ 0.7
PPP4R3A-202ENST00000554390 PDE4BQ07343 736 aa19.39■□□□□ 0.7
PPP4R3A-202ENST00000554390 FOXP4Q8IVH2 680 aaPredicted RBP19.39■□□□□ 0.7
PPP4R3A-202ENST00000554390 VSTM4Q8IW00 320 aa19.39■□□□□ 0.7
PPP4R3A-202ENST00000554390 DHX58Q96C10 678 aa19.39■□□□□ 0.7
PPP4R3A-202ENST00000554390 ABCC6O95255 1503 aa19.39■□□□□ 0.69
PPP4R3A-202ENST00000554390 AFDNP55196 1824 aaKnown RBP19.39■□□□□ 0.69
PPP4R3A-202ENST00000554390 CBFA2T2O43439 604 aa19.39■□□□□ 0.69
PPP4R3A-202ENST00000554390 MCM6Q14566 821 aa19.39■□□□□ 0.69
PPP4R3A-202ENST00000554390 FOXR1Q6PIV2 292 aa19.39■□□□□ 0.69
PPP4R3A-202ENST00000554390 SHC4Q6S5L8 630 aa19.39■□□□□ 0.69
PPP4R3A-202ENST00000554390 NBPF3Q9H094 633 aa19.39■□□□□ 0.69
PPP4R3A-202ENST00000554390 TOMM22Q9NS69 142 aa19.39■□□□□ 0.69
PPP4R3A-202ENST00000554390 IVLP07476 585 aa19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 RRP12Q5JTH9 1297 aaKnown RBP19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 JAKMIP3Q5VZ66 844 aa19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 MB21D2Q8IYB1 491 aaPredicted RBP19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 LONRF3Q496Y0 759 aa19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 KIFC2Q96AC6 838 aa19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 DESI2Q9BSY9 194 aa19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 ADKP55263 362 aaKnown RBP19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 NOM1Q5C9Z4 860 aaKnown RBP19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 SLC9C2Q5TAH2 1124 aa19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 CHMP4CQ96CF2 233 aa19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 KCNJ14Q9UNX9 436 aa19.38■□□□□ 0.69
PPP4R3A-202ENST00000554390 CASP1P29466 404 aa19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 BRD3Q15059 726 aa19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 KRT40Q6A162 431 aa19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 NFXL1Q6ZNB6 911 aa19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 KCNG4Q8TDN1 519 aa19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 IRX2Q9BZI1 471 aaPredicted RBP19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 hCG_1642624A0A1W2PR95 340 aa19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 PACS2Q86VP3 889 aa19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 BAG1Q99933 345 aaPredicted RBP19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 SLIT3O75094 1523 aa19.37■□□□□ 0.69
PPP4R3A-202ENST00000554390 A0A0U1RQJ8 604 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 GUCY1A2P33402 732 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 MCAMP43121 646 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 CTDSPL2Q05D32 466 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 TOGARAM2Q6ZUX3 1019 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 NCOA7Q8NI08 942 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 ATRIPQ8WXE1 791 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 GOLGA6L9A6NEM1 432 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 SMIM22K7EJ46 135 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 METAP2P50579 478 aaKnown RBP eCLIP19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 MYL5Q02045 173 aa19.36■□□□□ 0.69
PPP4R3A-202ENST00000554390 MAGEA9P43362 315 aa19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 TTC31Q49AM3 519 aaPredicted RBP19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 N4BP1O75113 896 aaKnown RBP19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 TFRCP02786 760 aaKnown RBP19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 BMP6P22004 513 aa19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 CCDC12Q8WUD4 166 aaPredicted RBP19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 STRN4Q9NRL3 753 aa19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 POLR3EQ9NVU0 708 aa19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 PCDHA5Q9Y5H7 936 aa19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 GOLGB1Q14789 3259 aaKnown RBP19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 KARSQ15046 597 aaKnown RBP19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 METTL24Q5JXM2 366 aa19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 BEND6Q5SZJ8 279 aaPredicted RBP19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 SLC26A6Q9BXS9 759 aa19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 GEMIN8Q9NWZ8 242 aaKnown RBP19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 JRKLQ9Y4A0 524 aa19.35■□□□□ 0.69
PPP4R3A-202ENST00000554390 A0A0G2JS52 829 aa19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 YEATS4O95619 227 aa19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 PRR29P0C7W0 189 aa19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 USP49Q70CQ1 688 aa19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 METTL16Q86W50 562 aaKnown RBP19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 CPLX3Q8WVH0 158 aa19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 EIF3CLB5ME19 914 aaKnown RBP19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 TOM1L2Q6ZVM7 507 aa19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 EIF3CQ99613 913 aaKnown RBP19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 FAN1Q9Y2M0 1017 aa19.34■□□□□ 0.69
PPP4R3A-202ENST00000554390 RANBP6O60518 1105 aaKnown RBP19.33■□□□□ 0.69
PPP4R3A-202ENST00000554390 CHMP4BP1P59074 171 aa19.33■□□□□ 0.69
PPP4R3A-202ENST00000554390 MTF1Q14872 753 aa19.33■□□□□ 0.69
PPP4R3A-202ENST00000554390 HDXQ7Z353 690 aa19.33■□□□□ 0.69
PPP4R3A-202ENST00000554390 PIH1D3Q9NQM4 214 aaKnown RBP19.33■□□□□ 0.69
PPP4R3A-202ENST00000554390 INTS13Q9NVM9 706 aa19.33■□□□□ 0.69
PPP4R3A-202ENST00000554390 WWC3Q9ULE0 1092 aa19.33■□□□□ 0.69
PPP4R3A-202ENST00000554390 RFX7Q2KHR2 1363 aa19.33■□□□□ 0.68
PPP4R3A-202ENST00000554390 BTBD18B2RXH4 712 aa19.33■□□□□ 0.68
PPP4R3A-202ENST00000554390 ANKZF1Q9H8Y5 726 aa19.33■□□□□ 0.68
PPP4R3A-202ENST00000554390 IQSEC3Q9UPP2 1182 aaPredicted RBP19.33■□□□□ 0.68
PPP4R3A-202ENST00000554390 LDHAL6AQ6ZMR3 332 aa19.32■□□□□ 0.68
PPP4R3A-202ENST00000554390 CNNM3Q8NE01 707 aa19.32■□□□□ 0.68
PPP4R3A-202ENST00000554390 GREM2Q9H772 168 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms