RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 WBP1LQ9NX94 342 aa16.67■□□□□ 0.26
NUMB-209ENST00000554315 MAGEB6P1A0A0J9YX57 407 aa16.66■□□□□ 0.26
NUMB-209ENST00000554315 INHBEP58166 350 aa16.66■□□□□ 0.26
NUMB-209ENST00000554315 KIF23Q02241 960 aaPredicted RBP16.66■□□□□ 0.26
NUMB-209ENST00000554315 MIGA2Q7L4E1 593 aa16.66■□□□□ 0.26
NUMB-209ENST00000554315 RASAL3Q86YV0 1011 aa16.66■□□□□ 0.26
NUMB-209ENST00000554315 ZFPM1Q8IX07 1006 aa16.66■□□□□ 0.26
NUMB-209ENST00000554315 CA12O43570 354 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 UBE3CQ15386 1083 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 ADGRA1Q86SQ6 560 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 CHD1LQ86WJ1 897 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 CDAN1Q8IWY9 1227 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 TGFBRAP1Q8WUH2 860 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 DDX4Q9NQI0 724 aaKnown RBP16.65■□□□□ 0.26
NUMB-209ENST00000554315 STAP2Q9UGK3 403 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 FZD1Q9UP38 647 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 ZNF532Q9HCE3 1301 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 TBC1D12O60347 775 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
NUMB-209ENST00000554315 HSPA1AP0DMV8 641 aaKnown RBP16.65■□□□□ 0.26
NUMB-209ENST00000554315 HSPA1BP0DMV9 641 aaKnown RBP16.65■□□□□ 0.26
NUMB-209ENST00000554315 ZBTB48P10074 688 aaPredicted RBP16.65■□□□□ 0.26
NUMB-209ENST00000554315 ADD2P35612 726 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 USP5P45974 858 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 MAP3K10Q02779 954 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 NUCB1Q02818 461 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 KBTBD3Q8NAB2 608 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.65■□□□□ 0.26
NUMB-209ENST00000554315 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
NUMB-209ENST00000554315 WRNIP1Q96S55 665 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
NUMB-209ENST00000554315 PI4KBQ9UBF8 816 aa16.65■□□□□ 0.26
NUMB-209ENST00000554315 DYNLL1P63167 89 aaKnown RBP16.64■□□□□ 0.25
NUMB-209ENST00000554315 SPRYD7Q5W111 196 aa16.64■□□□□ 0.25
NUMB-209ENST00000554315 FOXP4Q8IVH2 680 aaPredicted RBP16.64■□□□□ 0.25
NUMB-209ENST00000554315 CRNKL1Q9BZJ0 848 aaKnown RBP16.64■□□□□ 0.25
NUMB-209ENST00000554315 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
NUMB-209ENST00000554315 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
NUMB-209ENST00000554315 ZNF112Q9UJU3 913 aa16.64■□□□□ 0.25
NUMB-209ENST00000554315 DDTLA6NHG4 134 aaPredicted RBP16.63■□□□□ 0.25
NUMB-209ENST00000554315 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
NUMB-209ENST00000554315 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.63■□□□□ 0.25
NUMB-209ENST00000554315 TCRBV5S4A2TA0A5A2 114 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 MANSC4A6NHS7 340 aaPredicted RBP16.62■□□□□ 0.25
NUMB-209ENST00000554315 PDE1AP54750 535 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 SH3BP5LQ7L8J4 393 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 PI4K2BQ8TCG2 481 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 CLMNQ96JQ2 1002 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 HERC5Q9UII4 1024 aaKnown RBP16.62■□□□□ 0.25
NUMB-209ENST00000554315 SSC5DA1L4H1 1573 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 RFX7Q2KHR2 1363 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 ATRNL1Q5VV63 1379 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 HLA-DOAP06340 250 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
NUMB-209ENST00000554315 TM4SF4P48230 202 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
NUMB-209ENST00000554315 VGLL4Q14135 290 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 TICAM2Q86XR7 235 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 OTUD7AQ8TE49 926 aaPredicted RBP16.62■□□□□ 0.25
NUMB-209ENST00000554315 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 RIOK1Q9BRS2 568 aaKnown RBP16.62■□□□□ 0.25
NUMB-209ENST00000554315 TRIM34Q9BYJ4 488 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
NUMB-209ENST00000554315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.62■□□□□ 0.251e-10■■■■□ 19.6
NUMB-209ENST00000554315 TTC6Q86TZ1 520 aa16.61■□□□□ 0.25
NUMB-209ENST00000554315 ZKSCAN4Q969J2 545 aaPredicted RBP16.61■□□□□ 0.25
NUMB-209ENST00000554315 OPTNQ96CV9 577 aa16.61■□□□□ 0.25
NUMB-209ENST00000554315 DDRGK1Q96HY6 314 aa16.61■□□□□ 0.25
NUMB-209ENST00000554315 COL2A1P02458 1487 aaPredicted RBP16.61■□□□□ 0.25
NUMB-209ENST00000554315 RNF113AO15541 343 aaKnown RBP16.6■□□□□ 0.25
NUMB-209ENST00000554315 CTNND1O60716 968 aaKnown RBP16.6■□□□□ 0.25
NUMB-209ENST00000554315 OTUD7BQ6GQQ9 843 aa16.6■□□□□ 0.25
NUMB-209ENST00000554315 EVI5LQ96CN4 794 aa16.6■□□□□ 0.25
NUMB-209ENST00000554315 ZIC5Q96T25 663 aa16.6■□□□□ 0.25
NUMB-209ENST00000554315 PICK1Q9NRD5 415 aa16.6■□□□□ 0.25
NUMB-209ENST00000554315 FLT1P17948 1338 aa16.6■□□□□ 0.25
NUMB-209ENST00000554315 SALL3Q9BXA9 1300 aa16.6■□□□□ 0.25
NUMB-209ENST00000554315 PPATQ06203 517 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 MKRN3Q13064 507 aaKnown RBP16.59■□□□□ 0.25
NUMB-209ENST00000554315 CRACR2BQ8N4Y2 399 aaPredicted RBP16.59■□□□□ 0.25
NUMB-209ENST00000554315 ATP8A2Q9NTI2 1148 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 SPDYE5A6NIY4 337 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 PHF20L1A8MW92 1017 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 ALDH1A1P00352 501 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 NEFLP07196 543 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 GTF2A2P52657 109 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
NUMB-209ENST00000554315 AK9Q5TCS8 1911 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 APPBP2Q92624 585 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 FSD1Q9BTV5 496 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 OSBPL3Q9H4L5 887 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 SAGE1Q9NXZ1 904 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 PALD1Q9ULE6 856 aa16.59■□□□□ 0.25
NUMB-209ENST00000554315 PCNTO95613 3336 aa16.58■□□□□ 0.25
NUMB-209ENST00000554315 POLR3DP05423 398 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms