RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 HGSNATQ68CP4 663 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 TXNDC2Q86VQ3 553 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 HELQQ8TDG4 1101 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 SLC7A3Q8WY07 619 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 PBXIP1Q96AQ6 731 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 FMNL2Q96PY5 1086 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 RUSC1Q9BVN2 902 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 CHRDQ9H2X0 955 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 KCNF1Q9H3M0 494 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 SOX13Q9UN79 622 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 LRRC9Q6ZRR7 1453 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 ABCC5O15440 1437 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 TMEM94Q12767 1356 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 BTBD11A6QL63 1104 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 PDGFAP04085 211 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 C8orf34Q49A92 452 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 FDX2Q6P4F2 183 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 SLC26A8Q96RN1 970 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 HIF3AQ9Y2N7 669 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 EIF2AK4Q9P2K8 1649 aaKnown RBP5.07□□□□□ -1.6
SLIRP-202ENST00000553981 PRDM15P57071 1507 aaPredicted RBP5.07□□□□□ -1.6
SLIRP-202ENST00000553981 MYO5BQ9ULV0 1848 aa5.07□□□□□ -1.6
SLIRP-202ENST00000553981 ARHGAP31Q2M1Z3 1444 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 TMEM2Q9UHN6 1383 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 MEGF11A6BM72 1044 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 WDR64B1ANS9 1081 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 SOX1O00570 391 aaPredicted RBP5.06□□□□□ -1.6
SLIRP-202ENST00000553981 WNT11O96014 354 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 PCSK2P16519 638 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 TXKP42681 527 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 ARL4DP49703 201 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 C19orf57Q0VDD7 668 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 NOM1Q5C9Z4 860 aaKnown RBP5.06□□□□□ -1.6
SLIRP-202ENST00000553981 TMEM102Q8N9M5 508 aaPredicted RBP5.06□□□□□ -1.6
SLIRP-202ENST00000553981 PMEPA1Q969W9 287 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 NXPE3Q969Y0 559 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 NWD1Q149M9 1564 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 NOS1P29475 1434 aa5.06□□□□□ -1.6
SLIRP-202ENST00000553981 COL16A1Q07092 1604 aaPredicted RBP5.05□□□□□ -1.6
SLIRP-202ENST00000553981 GAS2O43903 313 aaKnown RBP5.05□□□□□ -1.6
SLIRP-202ENST00000553981 MPSTP25325 297 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 MAP4P27816 1152 aaKnown RBP5.05□□□□□ -1.6
SLIRP-202ENST00000553981 MZF1P28698 734 aaPredicted RBP5.05□□□□□ -1.6
SLIRP-202ENST00000553981 HOXA10P31260 410 aaPredicted RBP5.05□□□□□ -1.6
SLIRP-202ENST00000553981 EIF1AXP47813 144 aaKnown RBP5.05□□□□□ -1.6
SLIRP-202ENST00000553981 SGO2Q562F6 1265 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 VN1R5Q7Z5H4 357 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 BSNDQ8WZ55 320 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 MFSD14AQ96MC6 490 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 OSMRQ99650 979 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 RRP7BPQ9NSQ0 103 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 CROCC2H7BZ55 1655 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 ZFYVE9O95405 1425 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 PTPRUQ92729 1446 aa5.05□□□□□ -1.6
SLIRP-202ENST00000553981 DUOX2Q9NRD8 1548 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 EREGO14944 169 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 TSPY4P0CV99 314 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 TSPY10P0CW01 314 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 KCNA6P17658 529 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 TTC16Q8NEE8 873 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 ZKSCAN3Q9BRR0 538 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 TMPRSS13Q9BYE2 586 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 MYOM3Q5VTT5 1437 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 CHD2O14647 1828 aaKnown RBP5.04□□□□□ -1.6
SLIRP-202ENST00000553981 DIP2AQ14689 1571 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 KIF15Q9NS87 1388 aa5.04□□□□□ -1.6
SLIRP-202ENST00000553981 LMTK2Q8IWU2 1503 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 LOC100289279A0A1B0GTE1 492 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 TIAF1O95411 115 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 DLGAP3O95886 979 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 F13BP05160 661 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 RXRBP28702 533 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 IKBKEQ14164 716 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 NUTM2GQ5VZR2 741 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 C12orf50Q8NA57 414 aaPredicted RBP5.03□□□□□ -1.6
SLIRP-202ENST00000553981 SMG8Q8ND04 991 aaKnown RBP5.03□□□□□ -1.6
SLIRP-202ENST00000553981 GTF3C2Q8WUA4 911 aaPredicted RBP5.03□□□□□ -1.6
SLIRP-202ENST00000553981 CCDC97Q96F63 343 aaPredicted RBP5.03□□□□□ -1.6
SLIRP-202ENST00000553981 USP26Q9BXU7 913 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 PIM2Q9P1W9 311 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 POLIQ9UNA4 740 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 RNF114Q9Y508 228 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 DAPK1P53355 1430 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 ADAMTS13Q76LX8 1427 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 VPS8Q8N3P4 1428 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 PHLPP1O60346 1717 aa5.03□□□□□ -1.6
SLIRP-202ENST00000553981 EFCAB6Q5THR3 1501 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 PTPN23Q9H3S7 1636 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 PHACTR2O75167 634 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 TNFRSF21O75509 655 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 EDN3P14138 238 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 MTMR3Q13615 1198 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 FBXL6Q8N531 539 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 DDX17Q92841 729 aaKnown RBP5.02□□□□□ -1.61
SLIRP-202ENST00000553981 SOX17Q9H6I2 414 aaPredicted RBP5.02□□□□□ -1.61
SLIRP-202ENST00000553981 SUGCTQ9HAC7 445 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 CYP4F12Q9HCS2 524 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 ATG3Q9NT62 314 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 ADGRE2Q9UHX3 823 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 FOXD3Q9UJU5 478 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms