RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MTMR7Q9Y216 660 aa5.19□□□□□ -1.58
SRP54-204ENST00000553923 SNX11Q9Y5W9 270 aa5.19□□□□□ -1.58
SRP54-204ENST00000553923 ICMTO60725 284 aa5.18□□□□□ -1.58
SRP54-204ENST00000553923 ABL1P00519 1130 aa5.18□□□□□ -1.58
SRP54-204ENST00000553923 ZNF157P51786 506 aaPredicted RBP5.18□□□□□ -1.58
SRP54-204ENST00000553923 PKN1Q16512 942 aa5.18□□□□□ -1.58
SRP54-204ENST00000553923 ANGEL2Q5VTE6 544 aaKnown RBP5.18□□□□□ -1.58
SRP54-204ENST00000553923 EGFL7Q9UHF1 273 aa5.18□□□□□ -1.58
SRP54-204ENST00000553923 CPNE3O75131 537 aaKnown RBP5.17□□□□□ -1.58
SRP54-204ENST00000553923 NEFLP07196 543 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 HCLS1P14317 486 aaPredicted RBP5.17□□□□□ -1.58
SRP54-204ENST00000553923 CFPP27918 469 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 ARHGAP4P98171 946 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 ZSWIM9Q86XI8 627 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 STK35Q8TDR2 534 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 ISL2Q96A47 359 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 CCDC74AQ96AQ1 378 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 SLC38A3Q99624 504 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 PRDM7Q9NQW5 492 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 CTNND2Q9UQB3 1225 aa5.17□□□□□ -1.58
SRP54-204ENST00000553923 LRRC10BA6NIK2 292 aa5.16□□□□□ -1.58
SRP54-204ENST00000553923 GRM2Q14416 872 aa5.16□□□□□ -1.58
SRP54-204ENST00000553923 ZC3H12AQ5D1E8 599 aaKnown RBP5.16□□□□□ -1.58
SRP54-204ENST00000553923 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
SRP54-204ENST00000553923 TOP6BLQ8N6T0 577 aa5.16□□□□□ -1.58
SRP54-204ENST00000553923 CCER1Q8TC90 406 aaPredicted RBP5.16□□□□□ -1.58
SRP54-204ENST00000553923 CACNA2D2Q9NY47 1150 aa5.16□□□□□ -1.58
SRP54-204ENST00000553923 FAM53CQ9NYF3 392 aa5.16□□□□□ -1.58
SRP54-204ENST00000553923 BRPF3Q9ULD4 1205 aa5.16□□□□□ -1.58
SRP54-204ENST00000553923 IGF2BP3O00425 579 aaKnown RBP eCLIP5.15□□□□□ -1.59
SRP54-204ENST00000553923 RNGTTO60942 597 aaKnown RBP5.15□□□□□ -1.59
SRP54-204ENST00000553923 PPP1R15AO75807 674 aaPredicted RBP5.15□□□□□ -1.59
SRP54-204ENST00000553923 KRT1P04264 644 aa5.15□□□□□ -1.59
SRP54-204ENST00000553923 ZNF865P0CJ78 1059 aaPredicted RBP5.15□□□□□ -1.59
SRP54-204ENST00000553923 ERVK-24P63145 666 aa5.15□□□□□ -1.59
SRP54-204ENST00000553923 NKPD1Q17RQ9 610 aa5.15□□□□□ -1.59
SRP54-204ENST00000553923 FYB2Q5VWT5 728 aa5.15□□□□□ -1.59
SRP54-204ENST00000553923 LCNL1Q6ZST4 164 aa5.15□□□□□ -1.59
SRP54-204ENST00000553923 SPACA3Q8IXA5 215 aa5.15□□□□□ -1.59
SRP54-204ENST00000553923 RNF214Q8ND24 703 aa5.15□□□□□ -1.59
SRP54-204ENST00000553923 DNAJC25Q9H1X3 360 aa5.15□□□□□ -1.59
SRP54-204ENST00000553923 ARID3CA6NKF2 412 aa5.14□□□□□ -1.59
SRP54-204ENST00000553923 EIF1AYO14602 144 aaKnown RBP5.14□□□□□ -1.59
SRP54-204ENST00000553923 GPR182O15218 404 aa5.14□□□□□ -1.59
SRP54-204ENST00000553923 TSPAN15O95858 294 aa5.14□□□□□ -1.59
SRP54-204ENST00000553923 NTF4P34130 210 aa5.14□□□□□ -1.59
SRP54-204ENST00000553923 MLANAQ16655 118 aa5.14□□□□□ -1.59
SRP54-204ENST00000553923 LIN37Q96GY3 246 aaPredicted RBP5.14□□□□□ -1.59
SRP54-204ENST00000553923 ITIH2P19823 946 aa5.13□□□□□ -1.59
SRP54-204ENST00000553923 ZP2Q05996 745 aa5.13□□□□□ -1.59
SRP54-204ENST00000553923 RING1Q06587 406 aa5.13□□□□□ -1.59
SRP54-204ENST00000553923 PDE3BQ13370 1112 aa5.13□□□□□ -1.59
SRP54-204ENST00000553923 KCNMB1Q16558 191 aa5.13□□□□□ -1.59
SRP54-204ENST00000553923 EPS8L3Q8TE67 593 aaKnown RBP5.13□□□□□ -1.59
SRP54-204ENST00000553923 ASB11Q8WXH4 323 aa5.13□□□□□ -1.59
SRP54-204ENST00000553923 CITED4Q96RK1 184 aa5.13□□□□□ -1.59
SRP54-204ENST00000553923 TMEM39AQ9NV64 488 aa5.13□□□□□ -1.59
SRP54-204ENST00000553923 TRAK1Q9UPV9 953 aa5.13□□□□□ -1.59
SRP54-204ENST00000553923 EOMESO95936 686 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 RAP1GAPP47736 663 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 SERPINB4P48594 390 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 ZNF252P-AS1Q0IIN9 211 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 ARHGAP27Q6ZUM4 889 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 UBE3DQ7Z6J8 389 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 SIAH1Q8IUQ4 282 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.12□□□□□ -1.59
SRP54-204ENST00000553923 KCNB2Q92953 911 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 TOX2Q96NM4 488 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 NIF3L1Q9GZT8 377 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 C19orf73Q9NVV2 129 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 PITPNM2Q9BZ72 1349 aa5.12□□□□□ -1.59
SRP54-204ENST00000553923 H3BRB1 525 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 GADD45BO75293 160 aaPredicted RBP5.11□□□□□ -1.59
SRP54-204ENST00000553923 ARNTP27540 789 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 IKZF1Q13422 519 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 MPRIPQ6WCQ1 1025 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 PRR23BQ6ZRT6 265 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 SULF2Q8IWU5 870 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 GPBAR1Q8TDU6 330 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 CSRNP1Q96S65 589 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 TUT1Q9H6E5 874 aaKnown RBP5.11□□□□□ -1.59
SRP54-204ENST00000553923 PRDM10Q9NQV6 1147 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 LMCD1Q9NZU5 365 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 GTF2IRD1Q9UHL9 959 aa5.11□□□□□ -1.59
SRP54-204ENST00000553923 NDUFB5O43674 189 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 GLI1P08151 1106 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 AFMP43652 599 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 FCGRTP55899 365 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 PPP2R3AQ06190 1150 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 DTHD1Q6ZMT9 781 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 GLYCTKQ8IVS8 523 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 CCDC82Q8N4S0 544 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 SSU72Q9NP77 194 aaKnown RBP5.1□□□□□ -1.59
SRP54-204ENST00000553923 SEMA3GQ9NS98 782 aa5.1□□□□□ -1.59
SRP54-204ENST00000553923 GPN3Q9UHW5 284 aaPredicted RBP5.1□□□□□ -1.59
SRP54-204ENST00000553923 CNTNAP4Q9C0A0 1308 aa5.09□□□□□ -1.59
SRP54-204ENST00000553923 C1QTNF9P0C862 333 aa5.09□□□□□ -1.59
SRP54-204ENST00000553923 NME2P22392 152 aa5.09□□□□□ -1.59
SRP54-204ENST00000553923 CLCN7P51798 805 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms