RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 PTPRAP18433 802 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 TCP10Q12799 353 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 TRIM32Q13049 653 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 SUCLG2Q96I99 432 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 DAGLAQ9Y4D2 1042 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 PLXNB2O15031 1838 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 AK9Q5TCS8 1911 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 FGFR2P21802 821 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 MAP3K10Q02779 954 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 CCDC27Q2M243 656 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 FAM109BQ6ICB4 259 aaPredicted RBP12.17□□□□□ -0.46
CHD8-205ENST00000553651 FASTKD5Q7L8L6 764 aaKnown RBP12.17□□□□□ -0.46
CHD8-205ENST00000553651 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 SCYL3Q8IZE3 742 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 GJD2Q9UKL4 321 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 OGDHLQ9ULD0 1010 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 ZHX2Q9Y6X8 837 aa12.17□□□□□ -0.46
CHD8-205ENST00000553651 DOCK2Q92608 1830 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 RPTORQ8N122 1335 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 PDE8BO95263 885 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 HMGCRP04035 888 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 SLURP2P0DP57 97 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 DIXDC1Q155Q3 683 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 GADL1Q6ZQY3 521 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 SH3BP5LQ7L8J4 393 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 VPS37DQ86XT2 251 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 UBE2OQ9C0C9 1292 aaKnown RBP12.16□□□□□ -0.46
CHD8-205ENST00000553651 RFX7Q2KHR2 1363 aa12.16□□□□□ -0.46
CHD8-205ENST00000553651 IL16Q14005 1332 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 FANCIQ9NVI1 1328 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 DOCK1Q14185 1865 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 COL6A1P12109 1028 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
CHD8-205ENST00000553651 FAM110CQ1W6H9 321 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 RABL6Q3YEC7 729 aaPredicted RBP12.15□□□□□ -0.46
CHD8-205ENST00000553651 MAP3K21Q5TCX8 1036 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 ANKRD13CQ8N6S4 541 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 COA7Q96BR5 231 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 C11orf49Q9H6J7 331 aa12.15□□□□□ -0.46
CHD8-205ENST00000553651 PRKRIP1Q9H875 184 aaPredicted RBP12.15□□□□□ -0.46
CHD8-205ENST00000553651 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.15□□□□□ -0.46
CHD8-205ENST00000553651 UTYO14607 1347 aa12.14□□□□□ -0.47
CHD8-205ENST00000553651 FRAT2O75474 233 aaPredicted RBP12.14□□□□□ -0.47
CHD8-205ENST00000553651 ALDH1L1O75891 902 aa12.14□□□□□ -0.47
CHD8-205ENST00000553651 NBPF7P0C2Y1 421 aaPredicted RBP12.14□□□□□ -0.47
CHD8-205ENST00000553651 PRDX5P30044 214 aa12.14□□□□□ -0.47
CHD8-205ENST00000553651 TREML2Q5T2D2 321 aa12.14□□□□□ -0.47
CHD8-205ENST00000553651 CCDC84Q86UT8 332 aaPredicted RBP12.14□□□□□ -0.47
CHD8-205ENST00000553651 ANKRD44Q8N8A2 993 aa12.14□□□□□ -0.47
CHD8-205ENST00000553651 PRDM6Q9NQX0 595 aa12.14□□□□□ -0.47
CHD8-205ENST00000553651 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
CHD8-205ENST00000553651 AGTPBP1Q9UPW5 1226 aa12.14□□□□□ -0.47
CHD8-205ENST00000553651 MUC3AQ02505 3323 aa12.14□□□□□ -0.47
CHD8-205ENST00000553651 MYH13Q9UKX3 1938 aa12.13□□□□□ -0.47
CHD8-205ENST00000553651 LOC285556D6RIA3 1793 aa12.13□□□□□ -0.47
CHD8-205ENST00000553651 METTL24Q5JXM2 366 aa12.13□□□□□ -0.47
CHD8-205ENST00000553651 WDR66Q8TBY9 1149 aa12.13□□□□□ -0.47
CHD8-205ENST00000553651 SMCR8Q8TEV9 937 aaPredicted RBP12.13□□□□□ -0.47
CHD8-205ENST00000553651 TRIB2Q92519 343 aa12.13□□□□□ -0.47
CHD8-205ENST00000553651 IDI2Q9BXS1 227 aa12.13□□□□□ -0.47
CHD8-205ENST00000553651 BICC1Q9H694 974 aaKnown RBP12.13□□□□□ -0.47
CHD8-205ENST00000553651 HMX1Q9NP08 348 aaPredicted RBP12.13□□□□□ -0.47
CHD8-205ENST00000553651 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
CHD8-205ENST00000553651 DDTLA6NHG4 134 aaPredicted RBP12.12□□□□□ -0.47
CHD8-205ENST00000553651 TRIM75PA6NK02 468 aa12.12□□□□□ -0.47
CHD8-205ENST00000553651 RGS3P49796 1198 aa12.12□□□□□ -0.47
CHD8-205ENST00000553651 LRRC26Q2I0M4 334 aa12.12□□□□□ -0.47
CHD8-205ENST00000553651 PICK1Q9NRD5 415 aa12.12□□□□□ -0.47
CHD8-205ENST00000553651 USP40Q9NVE5 1235 aa12.12□□□□□ -0.47
CHD8-205ENST00000553651 CTNND1O60716 968 aaKnown RBP12.11□□□□□ -0.47
CHD8-205ENST00000553651 ENTPD3O75355 529 aa12.11□□□□□ -0.47
CHD8-205ENST00000553651 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
CHD8-205ENST00000553651 EXOSC9Q06265 439 aaKnown RBP12.11□□□□□ -0.47
CHD8-205ENST00000553651 KLHDC4Q8TBB5 520 aa12.11□□□□□ -0.47
CHD8-205ENST00000553651 DDX4Q9NQI0 724 aaKnown RBP12.11□□□□□ -0.47
CHD8-205ENST00000553651 CDH23Q9H251 3354 aa12.1□□□□□ -0.47
CHD8-205ENST00000553651 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
CHD8-205ENST00000553651 LHX8Q68G74 356 aa12.1□□□□□ -0.47
CHD8-205ENST00000553651 PROCA1Q8NCQ7 364 aaPredicted RBP12.1□□□□□ -0.47
CHD8-205ENST00000553651 FAM161BQ96MY7 647 aa12.1□□□□□ -0.47
CHD8-205ENST00000553651 SRCIN1Q9C0H9 1055 aa12.1□□□□□ -0.47
CHD8-205ENST00000553651 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
CHD8-205ENST00000553651 MORF4L1Q9UBU8 362 aa12.1□□□□□ -0.47
CHD8-205ENST00000553651 MAST2Q6P0Q8 1798 aa12.1□□□□□ -0.47
CHD8-205ENST00000553651 GAKO14976 1311 aa12.1□□□□□ -0.47
CHD8-205ENST00000553651 SALL1Q9NSC2 1324 aa12.1□□□□□ -0.47
CHD8-205ENST00000553651 MYH2Q9UKX2 1941 aa12.09□□□□□ -0.47
CHD8-205ENST00000553651 IFIT1P09914 478 aaKnown RBP12.09□□□□□ -0.47
CHD8-205ENST00000553651 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
CHD8-205ENST00000553651 RFX5P48382 616 aaPredicted RBP12.09□□□□□ -0.47
CHD8-205ENST00000553651 GCLCP48506 637 aaPredicted RBP12.09□□□□□ -0.47
CHD8-205ENST00000553651 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
CHD8-205ENST00000553651 LDHBP07195 334 aaKnown RBP12.08□□□□□ -0.48
CHD8-205ENST00000553651 CACNB2Q08289 660 aaPredicted RBP12.08□□□□□ -0.48
CHD8-205ENST00000553651 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
CHD8-205ENST00000553651 CCDC184Q52MB2 194 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms