RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 ADAMTS19Q8TE59 1207 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 KCTD15Q96SI1 283 aaPredicted RBP4.75□□□□□ -1.65
RDH11-204ENST00000553578 SUFUQ9UMX1 484 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 NUB1Q9Y5A7 615 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 COL4A3BPQ9Y5P4 624 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 PHLPP1O60346 1717 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 ACEP12821 1306 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 NBPF7P0C2Y1 421 aaPredicted RBP4.75□□□□□ -1.65
RDH11-204ENST00000553578 SMPD1P17405 629 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 NAP1L1P55209 391 aaKnown RBP4.75□□□□□ -1.65
RDH11-204ENST00000553578 WDR4P57081 412 aaKnown RBP4.75□□□□□ -1.65
RDH11-204ENST00000553578 CCDC173Q0VFZ6 552 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 WAPLQ7Z5K2 1190 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 TRMT44Q8IYL2 757 aaKnown RBP4.75□□□□□ -1.65
RDH11-204ENST00000553578 C1QTNF2Q9BXJ5 285 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 PGPEP1Q9NXJ5 209 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 FSD2A1L4K1 749 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 DHX16O60231 1041 aaKnown RBP4.74□□□□□ -1.65
RDH11-204ENST00000553578 TPM3P06753 285 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 DNM1Q05193 864 aaKnown RBP4.74□□□□□ -1.65
RDH11-204ENST00000553578 CTC1Q2NKJ3 1217 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 RNF20Q5VTR2 975 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 RPAINQ86UA6 219 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 ANKLE2Q86XL3 938 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 IL17RAQ96F46 866 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 CYLDQ9NQC7 956 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 PRR12Q9ULL5 1215 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 SUGT1Q9Y2Z0 365 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 MAP4K5Q9Y4K4 846 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 ABCC4O15439 1325 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 CCDC189A1A4V9 331 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 MINDY4BA8MYZ0 360 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 UPP2O95045 317 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 KRT18P05783 430 aaKnown RBP4.74□□□□□ -1.65
RDH11-204ENST00000553578 U2AF2P26368 475 aaKnown RBP eCLIP4.74□□□□□ -1.653e-9■■■■□ 23.3
RDH11-204ENST00000553578 WDR43Q15061 677 aaKnown RBP eCLIP4.74□□□□□ -1.65
RDH11-204ENST00000553578 ZKSCAN8Q15776 578 aaPredicted RBP4.74□□□□□ -1.65
RDH11-204ENST00000553578 NUTM2GQ5VZR2 741 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 SDE2Q6IQ49 451 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 TCP11L2Q8N4U5 519 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 OSBPL2Q9H1P3 480 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 ATG3Q9NT62 314 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 DONSONQ9NYP3 566 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 TOGARAM1Q9Y4F4 1720 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 ATP10DQ9P241 1426 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 FAM177BA6PVY3 158 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 GOLGA6L22H0YM25 854 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 CAPN5O15484 640 aaPredicted RBP4.74□□□□□ -1.65
RDH11-204ENST00000553578 HDAC1Q13547 482 aaPredicted RBP4.74□□□□□ -1.65
RDH11-204ENST00000553578 NFE2L2Q16236 605 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 CRTC2Q53ET0 693 aaPredicted RBP4.74□□□□□ -1.65
RDH11-204ENST00000553578 CCDC116Q8IYX3 515 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 ATL2Q8NHH9 583 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 DPF3Q92784 378 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 LRGUKQ96M69 825 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 CDK15Q96Q40 435 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 RPS6KC1Q96S38 1066 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 EMILIN1Q9Y6C2 1016 aa4.74□□□□□ -1.65
RDH11-204ENST00000553578 DIAPH1O60610 1272 aaKnown RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 GABPB1Q06547 395 aaPredicted RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 ANO1Q5XXA6 986 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 EXOC6Q8TAG9 804 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 GTF3C2Q8WUA4 911 aaPredicted RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 HPS1Q92902 700 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 SUDS3Q9H7L9 328 aaPredicted RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 JADE2Q9NQC1 790 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 HDAC9Q9UKV0 1011 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 RBM47A0AV96 593 aaKnown RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 CHL1O00533 1208 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 SCAMP3O14828 347 aaKnown RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 RBM5P52756 815 aaKnown RBP eCLIP4.73□□□□□ -1.65
RDH11-204ENST00000553578 SART3Q15020 963 aaKnown RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 C10orf67Q8IYJ2 551 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 MTMR8Q96EF0 704 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 NUCKS1Q9H1E3 243 aaKnown RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 IRAK4Q9NWZ3 460 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 PFDN2Q9UHV9 154 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 KIF1CO43896 1103 aaKnown RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 LIG1P18858 919 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 NASPP49321 788 aaPredicted RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 FOXD4Q12950 439 aaPredicted RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 CENPQQ7L2Z9 268 aaPredicted RBP4.73□□□□□ -1.65
RDH11-204ENST00000553578 CCDC91Q7Z6B0 441 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 BRMS1Q9HCU9 246 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 INTUQ9ULD6 942 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 FAM50BQ9Y247 325 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 SLC4A7Q9Y6M7 1214 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 LAMB2P55268 1798 aa4.73□□□□□ -1.65
RDH11-204ENST00000553578 TNS3Q68CZ2 1445 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 PES1O00541 588 aaKnown RBP4.72□□□□□ -1.65
RDH11-204ENST00000553578 HOXB7P09629 217 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 ZNF394Q53GI3 561 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 CCDC181Q5TID7 509 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 ACRBPQ8NEB7 543 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 CXorf56Q9H5V9 222 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 APAF1O14727 1248 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 NRDCO43847 1150 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 DNAJC6O75061 913 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 IFIT2P09913 472 aaKnown RBP4.72□□□□□ -1.65
RDH11-204ENST00000553578 SOX11P35716 441 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms