RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 PICK1Q9NRD5 415 aa14.72□□□□□ -0.05
SRP54-203ENST00000553544 STAP2Q9UGK3 403 aa14.72□□□□□ -0.05
SRP54-203ENST00000553544 NFIAQ12857 509 aa14.71□□□□□ -0.05
SRP54-203ENST00000553544 DEFB118Q96PH6 123 aa14.71□□□□□ -0.05
SRP54-203ENST00000553544 SLC45A1Q9Y2W3 748 aa14.71□□□□□ -0.05
SRP54-203ENST00000553544 COL6A3P12111 3177 aa14.71□□□□□ -0.06
SRP54-203ENST00000553544 A0A0G2JLL6 359 aaPredicted RBP14.7□□□□□ -0.06
SRP54-203ENST00000553544 TNPO2O14787 897 aaKnown RBP14.7□□□□□ -0.06
SRP54-203ENST00000553544 INHAP05111 366 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 SLC5A1P13866 664 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 ELNP15502 786 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 FGFR2P21802 821 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 RFX5P48382 616 aaPredicted RBP14.7□□□□□ -0.06
SRP54-203ENST00000553544 HNRNPUQ00839 825 aaKnown RBP eCLIP14.7□□□□□ -0.06
SRP54-203ENST00000553544 IRF5Q13568 498 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 GADL1Q6ZQY3 521 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 PRRT2Q7Z6L0 340 aaPredicted RBP14.7□□□□□ -0.06
SRP54-203ENST00000553544 SCYL3Q8IZE3 742 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 KLHDC4Q8TBB5 520 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 LPIN2Q92539 896 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 FAM198AQ9UFP1 575 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 DAGLAQ9Y4D2 1042 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 AFG3L2Q9Y4W6 797 aa14.7□□□□□ -0.06
SRP54-203ENST00000553544 ZSWIM8A7E2V4 1837 aa14.69□□□□□ -0.06
SRP54-203ENST00000553544 PHF20L1A8MW92 1017 aa14.69□□□□□ -0.06
SRP54-203ENST00000553544 LDHBP07195 334 aaKnown RBP14.69□□□□□ -0.06
SRP54-203ENST00000553544 PTPRAP18433 802 aa14.69□□□□□ -0.06
SRP54-203ENST00000553544 DIXDC1Q155Q3 683 aa14.69□□□□□ -0.06
SRP54-203ENST00000553544 NECAB2Q7Z6G3 386 aa14.69□□□□□ -0.06
SRP54-203ENST00000553544 SMCR8Q8TEV9 937 aaPredicted RBP14.69□□□□□ -0.06
SRP54-203ENST00000553544 COA7Q96BR5 231 aa14.69□□□□□ -0.06
SRP54-203ENST00000553544 PAWRQ96IZ0 340 aaKnown RBP14.69□□□□□ -0.06
SRP54-203ENST00000553544 GNL3LQ9NVN8 582 aaKnown RBP14.69□□□□□ -0.06
SRP54-203ENST00000553544 LRRFIP2Q9Y608 721 aaKnown RBP14.69□□□□□ -0.06
SRP54-203ENST00000553544 SOX1O00570 391 aaPredicted RBP14.68□□□□□ -0.06
SRP54-203ENST00000553544 BMP8BP34820 402 aa14.68□□□□□ -0.06
SRP54-203ENST00000553544 GPR153Q6NV75 609 aa14.68□□□□□ -0.06
SRP54-203ENST00000553544 ZFPM1Q8IX07 1006 aa14.68□□□□□ -0.06
SRP54-203ENST00000553544 LRCH3Q96II8 777 aa14.68□□□□□ -0.06
SRP54-203ENST00000553544 CRISPLD2Q9H0B8 497 aa14.68□□□□□ -0.06
SRP54-203ENST00000553544 PAK6Q9NQU5 681 aaPredicted RBP14.68□□□□□ -0.06
SRP54-203ENST00000553544 TAOK2Q9UL54 1235 aa14.68□□□□□ -0.06
SRP54-203ENST00000553544 EYA2O00167 538 aa14.67□□□□□ -0.06
SRP54-203ENST00000553544 ENTPD3O75355 529 aa14.67□□□□□ -0.06
SRP54-203ENST00000553544 BCAR3O75815 825 aa14.67□□□□□ -0.06
SRP54-203ENST00000553544 UBTFL1P0CB47 393 aaPredicted RBP14.67□□□□□ -0.06
SRP54-203ENST00000553544 MNX1P50219 401 aaPredicted RBP14.67□□□□□ -0.06
SRP54-203ENST00000553544 ZSCAN29Q8IWY8 852 aaPredicted RBP14.67□□□□□ -0.06
SRP54-203ENST00000553544 CUL9Q8IWT3 2517 aa14.67□□□□□ -0.06
SRP54-203ENST00000553544 CTNND1O60716 968 aaKnown RBP14.66□□□□□ -0.06
SRP54-203ENST00000553544 TRIM27P14373 513 aa14.66□□□□□ -0.06
SRP54-203ENST00000553544 PRDX5P30044 214 aa14.66□□□□□ -0.06
SRP54-203ENST00000553544 MAP3K10Q02779 954 aa14.66□□□□□ -0.06
SRP54-203ENST00000553544 MEIS3Q99687 375 aa14.66□□□□□ -0.06
SRP54-203ENST00000553544 IDI2Q9BXS1 227 aa14.66□□□□□ -0.06
SRP54-203ENST00000553544 LAMA3Q16787 3333 aa14.66□□□□□ -0.06
SRP54-203ENST00000553544 IPO8O15397 1037 aaKnown RBP14.65□□□□□ -0.06
SRP54-203ENST00000553544 RGS3P49796 1198 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 ATF7IPQ6VMQ6 1270 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 ATG9AQ7Z3C6 839 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 ANKRD13CQ8N6S4 541 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 ANKLE1Q8NAG6 615 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 GDF15Q99988 308 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 FBXO3Q9UK99 471 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 DENND2AQ9ULE3 1009 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 HDAC5Q9UQL6 1122 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 ZBED9Q6R2W3 1325 aa14.65□□□□□ -0.06
SRP54-203ENST00000553544 TRIM75PA6NK02 468 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 SEMA3EO15041 775 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 SLF2Q8IX21 1173 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 DEFB123Q8N688 67 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 NBPF3Q9H094 633 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.64□□□□□ -0.07
SRP54-203ENST00000553544 CEP126Q9P2H0 1117 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 PNMA3Q9UL41 463 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 AGTPBP1Q9UPW5 1226 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 TNNQ9UQP3 1299 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 SALL1Q9NSC2 1324 aa14.64□□□□□ -0.07
SRP54-203ENST00000553544 AK9Q5TCS8 1911 aa14.63□□□□□ -0.07
SRP54-203ENST00000553544 ATP2B3Q16720 1220 aa14.63□□□□□ -0.07
SRP54-203ENST00000553544 C7orf61Q8IZ16 206 aa14.63□□□□□ -0.07
SRP54-203ENST00000553544 ZGPATQ8N5A5 531 aaKnown RBP14.63□□□□□ -0.07
SRP54-203ENST00000553544 HMX1Q9NP08 348 aaPredicted RBP14.63□□□□□ -0.07
SRP54-203ENST00000553544 CIAO1O76071 339 aa14.62□□□□□ -0.07
SRP54-203ENST00000553544 GNAI3P08754 354 aa14.62□□□□□ -0.07
SRP54-203ENST00000553544 GCLCP48506 637 aaPredicted RBP14.62□□□□□ -0.07
SRP54-203ENST00000553544 FAM110CQ1W6H9 321 aa14.62□□□□□ -0.07
SRP54-203ENST00000553544 LRIT3Q3SXY7 679 aa14.62□□□□□ -0.07
SRP54-203ENST00000553544 SH3BP5LQ7L8J4 393 aa14.62□□□□□ -0.07
SRP54-203ENST00000553544 DIS3LQ8TF46 1054 aaKnown RBP14.62□□□□□ -0.07
SRP54-203ENST00000553544 FRAT1Q92837 279 aaPredicted RBP14.62□□□□□ -0.07
SRP54-203ENST00000553544 FAM163AQ96GL9 167 aaPredicted RBP14.62□□□□□ -0.07
SRP54-203ENST00000553544 COPRSQ9NQ92 184 aa14.62□□□□□ -0.07
SRP54-203ENST00000553544 ZMYND8Q9ULU4 1186 aaPredicted RBP14.62□□□□□ -0.07
SRP54-203ENST00000553544 RPTORQ8N122 1335 aa14.62□□□□□ -0.07
SRP54-203ENST00000553544 ATRNL1Q5VV63 1379 aa14.61□□□□□ -0.07
SRP54-203ENST00000553544 DDTLA6NHG4 134 aaPredicted RBP14.61□□□□□ -0.07
SRP54-203ENST00000553544 TBC1D12O60347 775 aa14.61□□□□□ -0.07
SRP54-203ENST00000553544 HMGCRP04035 888 aa14.61□□□□□ -0.07
SRP54-203ENST00000553544 PABPC4Q13310 644 aaKnown RBP eCLIP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms