RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CCL15Q16663 113 aa22.39■■□□□ 1.17
SHMT2-206ENST00000553529 AACSQ86V21 672 aa22.39■■□□□ 1.17
SHMT2-206ENST00000553529 SH3RF3Q8TEJ3 882 aaPredicted RBP22.39■■□□□ 1.17
SHMT2-206ENST00000553529 FAM163AQ96GL9 167 aaPredicted RBP22.39■■□□□ 1.17
SHMT2-206ENST00000553529 IDI2Q9BXS1 227 aa22.39■■□□□ 1.17
SHMT2-206ENST00000553529 ZNF341Q9BYN7 854 aa22.39■■□□□ 1.17
SHMT2-206ENST00000553529 TESPA1A2RU30 521 aaPredicted RBP22.38■■□□□ 1.17
SHMT2-206ENST00000553529 UQCRFS1P1P0C7P4 283 aa22.38■■□□□ 1.17
SHMT2-206ENST00000553529 SPTY2D1Q68D10 685 aaPredicted RBP22.38■■□□□ 1.17
SHMT2-206ENST00000553529 CTU1Q7Z7A3 348 aaKnown RBP22.38■■□□□ 1.17
SHMT2-206ENST00000553529 YTHDC1Q96MU7 727 aaKnown RBP22.38■■□□□ 1.17
SHMT2-206ENST00000553529 LRP2BPQ9P2M1 347 aa22.38■■□□□ 1.17
SHMT2-206ENST00000553529 UNCXA6NJT0 531 aa22.37■■□□□ 1.17
SHMT2-206ENST00000553529 ECM2O94769 699 aaPredicted RBP22.37■■□□□ 1.17
SHMT2-206ENST00000553529 CCDC158Q5M9N0 1113 aa22.37■■□□□ 1.17
SHMT2-206ENST00000553529 ZSCAN29Q8IWY8 852 aaPredicted RBP22.37■■□□□ 1.17
SHMT2-206ENST00000553529 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.37■■□□□ 1.17
SHMT2-206ENST00000553529 AATFQ9NY61 560 aaKnown RBP eCLIP22.37■■□□□ 1.17
SHMT2-206ENST00000553529 ZNF112Q9UJU3 913 aa22.37■■□□□ 1.17
SHMT2-206ENST00000553529 PHF20L1A8MW92 1017 aa22.36■■□□□ 1.17
SHMT2-206ENST00000553529 DYNLL1P63167 89 aaKnown RBP22.36■■□□□ 1.17
SHMT2-206ENST00000553529 DCAF15Q66K64 600 aa22.36■■□□□ 1.17
SHMT2-206ENST00000553529 RHPN1Q8TCX5 695 aa22.36■■□□□ 1.17
SHMT2-206ENST00000553529 CFHR5Q9BXR6 569 aa22.36■■□□□ 1.17
SHMT2-206ENST00000553529 DDX19BQ9UMR2 479 aa22.36■■□□□ 1.17
SHMT2-206ENST00000553529 FKTNO75072 461 aa22.35■■□□□ 1.17
SHMT2-206ENST00000553529 ENTPD3O75355 529 aa22.35■■□□□ 1.17
SHMT2-206ENST00000553529 RRP1BQ14684 758 aaKnown RBP22.35■■□□□ 1.17
SHMT2-206ENST00000553529 SLC4A8Q2Y0W8 1093 aa22.35■■□□□ 1.17
SHMT2-206ENST00000553529 ERO1BQ86YB8 467 aa22.35■■□□□ 1.17
SHMT2-206ENST00000553529 CD99L2Q8TCZ2 262 aa22.35■■□□□ 1.17
SHMT2-206ENST00000553529 BTBD19C9JJ37 291 aa22.34■■□□□ 1.17
SHMT2-206ENST00000553529 SOX10P56693 466 aa22.34■■□□□ 1.17
SHMT2-206ENST00000553529 SHROOM1Q2M3G4 852 aaPredicted RBP22.34■■□□□ 1.17
SHMT2-206ENST00000553529 EDC3Q96F86 508 aaKnown RBP22.34■■□□□ 1.17
SHMT2-206ENST00000553529 PHIPQ8WWQ0 1821 aa22.34■■□□□ 1.17
SHMT2-206ENST00000553529 DOCK1Q14185 1865 aa22.33■■□□□ 1.17
SHMT2-206ENST00000553529 INHBEP58166 350 aa22.33■■□□□ 1.17
SHMT2-206ENST00000553529 MOGSQ13724 837 aa22.33■■□□□ 1.17
SHMT2-206ENST00000553529 NAA16Q6N069 864 aaPredicted RBP22.33■■□□□ 1.17
SHMT2-206ENST00000553529 HPS5Q9UPZ3 1129 aa22.33■■□□□ 1.17
SHMT2-206ENST00000553529 FOCADQ5VW36 1801 aa22.32■■□□□ 1.16
SHMT2-206ENST00000553529 SMARCA5O60264 1052 aaPredicted RBP22.32■■□□□ 1.16
SHMT2-206ENST00000553529 GTF2A2P52657 109 aa22.32■■□□□ 1.16
SHMT2-206ENST00000553529 PPIL2Q13356 520 aa22.32■■□□□ 1.16
SHMT2-206ENST00000553529 SLFNL1Q499Z3 407 aa22.32■■□□□ 1.16
SHMT2-206ENST00000553529 TEX11Q8IYF3 940 aa22.32■■□□□ 1.16
SHMT2-206ENST00000553529 MIGA1Q8NAN2 632 aa22.32■■□□□ 1.16
SHMT2-206ENST00000553529 OSBPL5Q9H0X9 879 aaPredicted RBP22.32■■□□□ 1.16
SHMT2-206ENST00000553529 IDH1O75874 414 aaKnown RBP22.31■■□□□ 1.16
SHMT2-206ENST00000553529 ALDH1A1P00352 501 aa22.31■■□□□ 1.16
SHMT2-206ENST00000553529 CHGBP05060 677 aa22.31■■□□□ 1.16
SHMT2-206ENST00000553529 TAF1CQ15572 869 aaPredicted RBP22.31■■□□□ 1.16
SHMT2-206ENST00000553529 MAPKAPK5Q8IW41 473 aa22.31■■□□□ 1.16
SHMT2-206ENST00000553529 SLF2Q8IX21 1173 aa22.31■■□□□ 1.16
SHMT2-206ENST00000553529 ZNF512BQ96KM6 892 aaPredicted RBP22.31■■□□□ 1.16
SHMT2-206ENST00000553529 MS4A1P11836 297 aa22.3■■□□□ 1.16
SHMT2-206ENST00000553529 GSTO1P78417 241 aa22.3■■□□□ 1.16
SHMT2-206ENST00000553529 JAG1P78504 1218 aa22.3■■□□□ 1.16
SHMT2-206ENST00000553529 NOL9Q5SY16 702 aaKnown RBP22.3■■□□□ 1.16
SHMT2-206ENST00000553529 RPAP2Q8IXW5 612 aaPredicted RBP22.3■■□□□ 1.16
SHMT2-206ENST00000553529 TGFBRAP1Q8WUH2 860 aa22.3■■□□□ 1.16
SHMT2-206ENST00000553529 ARHGAP39Q9C0H5 1083 aa22.3■■□□□ 1.16
SHMT2-206ENST00000553529 ATAD5Q96QE3 1844 aa22.29■■□□□ 1.16
SHMT2-206ENST00000553529 PPATQ06203 517 aa22.29■■□□□ 1.16
SHMT2-206ENST00000553529 OTOP1Q7RTM1 612 aa22.29■■□□□ 1.16
SHMT2-206ENST00000553529 MAGEB6Q8N7X4 407 aa22.29■■□□□ 1.16
SHMT2-206ENST00000553529 HOOK2Q96ED9 719 aa22.29■■□□□ 1.16
SHMT2-206ENST00000553529 SAP30BPQ9UHR5 308 aaKnown RBP22.29■■□□□ 1.16
SHMT2-206ENST00000553529 TRIM17Q9Y577 477 aa22.29■■□□□ 1.16
SHMT2-206ENST00000553529 LDHCP07864 332 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 PTPRAP18433 802 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 CYP7A1P22680 504 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 MAP3K10Q02779 954 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 EVX2Q03828 476 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 SNAPC2Q13487 334 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 NOM1Q5C9Z4 860 aaKnown RBP22.28■■□□□ 1.16
SHMT2-206ENST00000553529 ERC1Q8IUD2 1116 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 SCYL3Q8IZE3 742 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 DNAJC18Q9H819 358 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 FLT1P17948 1338 aa22.28■■□□□ 1.16
SHMT2-206ENST00000553529 PTPRFP10586 1907 aa22.27■■□□□ 1.16
SHMT2-206ENST00000553529 CETPP11597 493 aa22.27■■□□□ 1.16
SHMT2-206ENST00000553529 KCNH4Q9UQ05 1017 aa22.27■■□□□ 1.16
SHMT2-206ENST00000553529 ZHX2Q9Y6X8 837 aa22.27■■□□□ 1.16
SHMT2-206ENST00000553529 HTTP42858 3142 aa22.27■■□□□ 1.16
SHMT2-206ENST00000553529 CTGFP29279 349 aa22.26■■□□□ 1.15
SHMT2-206ENST00000553529 PDE3AQ14432 1141 aa22.26■■□□□ 1.15
SHMT2-206ENST00000553529 GPAT2Q6NUI2 795 aa22.26■■□□□ 1.15
SHMT2-206ENST00000553529 KIF1BPQ96EK5 621 aa22.26■■□□□ 1.15
SHMT2-206ENST00000553529 DNAJC2Q99543 621 aaKnown RBP22.26■■□□□ 1.15
SHMT2-206ENST00000553529 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.26■■□□□ 1.15
SHMT2-206ENST00000553529 CPA4Q9UI42 421 aa22.26■■□□□ 1.15
SHMT2-206ENST00000553529 PALD1Q9ULE6 856 aa22.26■■□□□ 1.15
SHMT2-206ENST00000553529 OTUD7BQ6GQQ9 843 aa22.25■■□□□ 1.15
SHMT2-206ENST00000553529 TRIM75PA6NK02 468 aa22.24■■□□□ 1.15
SHMT2-206ENST00000553529 PDHXO00330 501 aa22.24■■□□□ 1.15
SHMT2-206ENST00000553529 GOLIM4O00461 696 aa22.24■■□□□ 1.15
SHMT2-206ENST00000553529 CYP2C8P10632 490 aa22.24■■□□□ 1.15
SHMT2-206ENST00000553529 PPP4CP60510 307 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms