RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 COL5A3P25940 1745 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-221ENST00000553498 ZNF804BA4D1E1 1349 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 NT5C2P49902 561 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 RBM6P78332 1123 aaKnown RBP8.65□□□□□ -1.02
ATXN3-221ENST00000553498 CHRNDQ07001 517 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 ALX1Q15699 326 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 KLHL40Q2TBA0 621 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 SLC9C2Q5TAH2 1124 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 TBC1D9BQ66K14 1250 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 KRT27Q7Z3Y8 459 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 OSBP2Q969R2 916 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 LLPHQ9BRT6 129 aaKnown RBP8.65□□□□□ -1.02
ATXN3-221ENST00000553498 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 AGXT2Q9BYV1 514 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
ATXN3-221ENST00000553498 PPEF1O14829 653 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-221ENST00000553498 FMNL1O95466 1100 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-221ENST00000553498 MBD3O95983 291 aa8.64□□□□□ -1.03
ATXN3-221ENST00000553498 PHKA1P46020 1223 aa8.64□□□□□ -1.03
ATXN3-221ENST00000553498 EVCP57679 992 aa8.64□□□□□ -1.03
ATXN3-221ENST00000553498 RPS8P62241 208 aaKnown RBP8.64□□□□□ -1.03
ATXN3-221ENST00000553498 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
ATXN3-221ENST00000553498 SCARF1Q14162 830 aa8.64□□□□□ -1.03
ATXN3-221ENST00000553498 L1TD1Q5T7N2 865 aaKnown RBP8.64□□□□□ -1.03
ATXN3-221ENST00000553498 SEC62Q99442 399 aaKnown RBP8.64□□□□□ -1.03
ATXN3-221ENST00000553498 SEC31BQ9NQW1 1179 aa8.64□□□□□ -1.03
ATXN3-221ENST00000553498 DENND2AQ9ULE3 1009 aa8.64□□□□□ -1.03
ATXN3-221ENST00000553498 SCN7AQ01118 1682 aa8.64□□□□□ -1.03
ATXN3-221ENST00000553498 PNPLA7Q6ZV29 1317 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 FAM177BA6PVY3 158 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 E7EWF7 191 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 M0R2C6 588 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 ZNF213O14771 459 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 GPAA1O43292 621 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 STX6O43752 255 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 DHX16O60231 1041 aaKnown RBP8.63□□□□□ -1.03
ATXN3-221ENST00000553498 ZSCAN22P10073 491 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-221ENST00000553498 PDE6AP16499 860 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 GGCXP38435 758 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 HMGN5P82970 282 aaKnown RBP8.63□□□□□ -1.03
ATXN3-221ENST00000553498 EXOSC10Q01780 885 aaKnown RBP8.63□□□□□ -1.03
ATXN3-221ENST00000553498 TRDNQ13061 729 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 RASGRF1Q13972 1273 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 ME3Q16798 604 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 CCDC129Q6ZRS4 1044 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 TMC4Q7Z404 712 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 ANKLE1Q8NAG6 615 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 FLAD1Q8NFF5 587 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 AIDAQ96BJ3 306 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 ZNF274Q96GC6 653 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-221ENST00000553498 MTA3Q9BTC8 594 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 NACAP1Q9BZK3 213 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 TPCN1Q9ULQ1 816 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 MINPP1Q9UNW1 487 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 ZDHHC9Q9Y397 364 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 NDUFB9Q9Y6M9 179 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 BCORQ6W2J9 1755 aa8.63□□□□□ -1.03
ATXN3-221ENST00000553498 ZNF532Q9HCE3 1301 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 TCRBV5S4A2TA0A5A2 114 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 PATL2C9JE40 543 aaKnown RBP8.62□□□□□ -1.03
ATXN3-221ENST00000553498 PLSCR1O15162 318 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 IDH1O75874 414 aaKnown RBP8.62□□□□□ -1.03
ATXN3-221ENST00000553498 FGAP02671 866 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 NCLP19338 710 aaKnown RBP8.62□□□□□ -1.03
ATXN3-221ENST00000553498 MCM5P33992 734 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 ST5P78524 1137 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 FGD1P98174 961 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 TOB2Q14106 344 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-221ENST00000553498 MSS51Q4VC12 460 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 PTF1AQ7RTS3 328 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 RALYLQ86SE5 291 aaKnown RBP8.62□□□□□ -1.03
ATXN3-221ENST00000553498 CNBD1Q8NA66 436 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 TMEM87AQ8NBN3 555 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 NCOA7Q8NI08 942 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 GTF3C6Q969F1 213 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 PUS7LQ9H0K6 701 aaKnown RBP8.62□□□□□ -1.03
ATXN3-221ENST00000553498 PIH1D3Q9NQM4 214 aaKnown RBP8.62□□□□□ -1.03
ATXN3-221ENST00000553498 LEMD3Q9Y2U8 911 aa8.62□□□□□ -1.03
ATXN3-221ENST00000553498 LAMB2P55268 1798 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 NPHP1O15259 732 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 PFKFB2O60825 505 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 PCP11498 1178 aaKnown RBP8.61□□□□□ -1.03
ATXN3-221ENST00000553498 NDUFV2P19404 249 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 SYT1P21579 422 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 GJB2P29033 226 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 GRAPQ13588 217 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 Q3C1V9 767 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 MCTP1Q6DN14 999 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 GIMAP6Q6P9H5 292 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 BICDL1Q6ZP65 573 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 Q6ZUG5 572 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 C15orf52Q6ZUT6 534 aaKnown RBP8.61□□□□□ -1.03
ATXN3-221ENST00000553498 NOL8Q76FK4 1167 aaKnown RBP8.61□□□□□ -1.03
ATXN3-221ENST00000553498 FBXO33Q7Z6M2 555 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 VPS37DQ86XT2 251 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 CERS3Q8IU89 383 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 CCDC83Q8IWF9 413 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 HELBQ8NG08 1087 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms