RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 EPHX2P34913 555 aa17.98■□□□□ 0.47
ABCD4-218ENST00000553486 CCT2P78371 535 aaKnown RBP17.98■□□□□ 0.47
ABCD4-218ENST00000553486 EAPPQ56P03 285 aaPredicted RBP17.98■□□□□ 0.47
ABCD4-218ENST00000553486 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
ABCD4-218ENST00000553486 VPS37DQ86XT2 251 aa17.98■□□□□ 0.47
ABCD4-218ENST00000553486 COL4A5P29400 1685 aa17.98■□□□□ 0.47
ABCD4-218ENST00000553486 FERMT3Q86UX7 667 aa17.98■□□□□ 0.47
ABCD4-218ENST00000553486 PNMA8AQ86V59 439 aaPredicted RBP17.98■□□□□ 0.47
ABCD4-218ENST00000553486 IFNL3Q8IZI9 196 aa17.98■□□□□ 0.47
ABCD4-218ENST00000553486 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
ABCD4-218ENST00000553486 ZSCAN16Q9H4T2 348 aaPredicted RBP17.98■□□□□ 0.47
ABCD4-218ENST00000553486 DENND2AQ9ULE3 1009 aa17.98■□□□□ 0.47
ABCD4-218ENST00000553486 PTPDC1A2A3K4 754 aa17.97■□□□□ 0.47
ABCD4-218ENST00000553486 DHX16O60231 1041 aaKnown RBP17.97■□□□□ 0.47
ABCD4-218ENST00000553486 HSPA1AP0DMV8 641 aaKnown RBP17.97■□□□□ 0.47
ABCD4-218ENST00000553486 HSPA1BP0DMV9 641 aaKnown RBP17.97■□□□□ 0.47
ABCD4-218ENST00000553486 GYG1P46976 350 aa17.97■□□□□ 0.47
ABCD4-218ENST00000553486 NACAP1Q9BZK3 213 aa17.97■□□□□ 0.47
ABCD4-218ENST00000553486 NAPBQ9H115 298 aa17.97■□□□□ 0.47
ABCD4-218ENST00000553486 SYCE3A1L190 88 aa17.96■□□□□ 0.47
ABCD4-218ENST00000553486 SEMA3EO15041 775 aa17.96■□□□□ 0.47
ABCD4-218ENST00000553486 CTDNEP1O95476 244 aa17.96■□□□□ 0.47
ABCD4-218ENST00000553486 ITGBL1O95965 494 aaPredicted RBP17.96■□□□□ 0.47
ABCD4-218ENST00000553486 ANTXR2P58335 489 aa17.96■□□□□ 0.47
ABCD4-218ENST00000553486 NAA16Q6N069 864 aaPredicted RBP17.96■□□□□ 0.47
ABCD4-218ENST00000553486 SCAND2PQ9GZW5 306 aaPredicted RBP17.96■□□□□ 0.47
ABCD4-218ENST00000553486 NBPF3Q9H094 633 aa17.96■□□□□ 0.47
ABCD4-218ENST00000553486 ARMT1Q9H993 441 aa17.96■□□□□ 0.47
ABCD4-218ENST00000553486 MKRN1Q9UHC7 482 aaKnown RBP17.96■□□□□ 0.47
ABCD4-218ENST00000553486 MYH13Q9UKX3 1938 aa17.96■□□□□ 0.47
ABCD4-218ENST00000553486 ELP1O95163 1332 aa17.96■□□□□ 0.47
ABCD4-218ENST00000553486 LETM1O95202 739 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-218ENST00000553486 NASPP49321 788 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-218ENST00000553486 EIF6P56537 245 aaKnown RBP17.95■□□□□ 0.46
ABCD4-218ENST00000553486 TBC1D10CQ8IV04 446 aa17.95■□□□□ 0.46
ABCD4-218ENST00000553486 LARGE2Q8N3Y3 721 aa17.95■□□□□ 0.46
ABCD4-218ENST00000553486 ANP32BQ92688 251 aaKnown RBP17.95■□□□□ 0.46
ABCD4-218ENST00000553486 ATP6V0A2Q9Y487 856 aa17.95■□□□□ 0.46
ABCD4-218ENST00000553486 KLF18A0A0U1RQI7 1052 aa17.95■□□□□ 0.46
ABCD4-218ENST00000553486 CCDC183Q5T5S1 534 aa17.95■□□□□ 0.46
ABCD4-218ENST00000553486 FBXO33Q7Z6M2 555 aa17.95■□□□□ 0.46
ABCD4-218ENST00000553486 FAM84BQ96KN1 310 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-218ENST00000553486 NCOA5Q9HCD5 579 aaKnown RBP17.95■□□□□ 0.46
ABCD4-218ENST00000553486 IQSEC3Q9UPP2 1182 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-218ENST00000553486 CLEC11AQ9Y240 323 aa17.95■□□□□ 0.46
ABCD4-218ENST00000553486 SALL1Q9NSC2 1324 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 GSG1L2A8MUP6 293 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 CYP7A1P22680 504 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 RESTQ13127 1097 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 TMEM87BQ96K49 555 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 TMX4Q9H1E5 349 aaPredicted RBP17.94■□□□□ 0.46
ABCD4-218ENST00000553486 GPHNQ9NQX3 736 aaPredicted RBP17.94■□□□□ 0.46
ABCD4-218ENST00000553486 RAI14Q9P0K7 980 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 ABCF2Q9UG63 623 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 GJA3Q9Y6H8 435 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 SLC4A4Q9Y6R1 1079 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 ADAMTSL1Q8N6G6 1762 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 CNTNAP1P78357 1384 aa17.94■□□□□ 0.46
ABCD4-218ENST00000553486 LCORLQ8N3X6 602 aa17.93■□□□□ 0.46
ABCD4-218ENST00000553486 CNNM2Q9H8M5 875 aa17.93■□□□□ 0.46
ABCD4-218ENST00000553486 EPB41L4AQ9HCS5 686 aaPredicted RBP17.93■□□□□ 0.46
ABCD4-218ENST00000553486 ANGEL1Q9UNK9 670 aaKnown RBP17.93■□□□□ 0.46
ABCD4-218ENST00000553486 MYH15Q9Y2K3 1946 aa17.93■□□□□ 0.46
ABCD4-218ENST00000553486 TMEM88BA6NKF7 163 aa17.93■□□□□ 0.46
ABCD4-218ENST00000553486 GOLGA8BA8MQT2 603 aa17.93■□□□□ 0.46
ABCD4-218ENST00000553486 TDO2P48775 406 aa17.93■□□□□ 0.46
ABCD4-218ENST00000553486 PDS5AQ29RF7 1337 aaKnown RBP17.92■□□□□ 0.46
ABCD4-218ENST00000553486 PPIP5K2O43314 1243 aa17.92■□□□□ 0.46
ABCD4-218ENST00000553486 SCNN1DP51172 638 aa17.92■□□□□ 0.46
ABCD4-218ENST00000553486 MAP1SQ66K74 1059 aaPredicted RBP17.92■□□□□ 0.46
ABCD4-218ENST00000553486 CYB5R4Q7L1T6 521 aa17.92■□□□□ 0.46
ABCD4-218ENST00000553486 TTC6Q86TZ1 520 aa17.92■□□□□ 0.46
ABCD4-218ENST00000553486 NIM1KQ8IY84 436 aa17.92■□□□□ 0.46
ABCD4-218ENST00000553486 SPATA32Q96LK8 384 aa17.92■□□□□ 0.46
ABCD4-218ENST00000553486 KRT23Q9C075 422 aa17.92■□□□□ 0.46
ABCD4-218ENST00000553486 RBSNQ9H1K0 784 aa17.92■□□□□ 0.46
ABCD4-218ENST00000553486 MAGEB6P1A0A0J9YX57 407 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 B4E1Z4 1266 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 SH2B2O14492 632 aaPredicted RBP17.91■□□□□ 0.46
ABCD4-218ENST00000553486 CPLX1O14810 134 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 BBOX1O75936 387 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 LMOD1P29536 600 aaPredicted RBP17.91■□□□□ 0.46
ABCD4-218ENST00000553486 HIBADHP31937 336 aaKnown RBP17.91■□□□□ 0.46
ABCD4-218ENST00000553486 AOC3Q16853 763 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 AKNAD1Q5T1N1 836 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 FAM173BQ6P4H8 233 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 VPS33BQ9H267 617 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 TSPY26PQ9H489 355 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 CFAP45Q9UL16 551 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 WTIPA6NIX2 430 aaPredicted RBP17.91■□□□□ 0.46
ABCD4-218ENST00000553486 ZBTB22O15209 634 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 PRKAB2O43741 272 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 MIGA1Q8NAN2 632 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 RTFDC1Q9BY42 306 aaPredicted RBP17.91■□□□□ 0.46
ABCD4-218ENST00000553486 HPS5Q9UPZ3 1129 aa17.91■□□□□ 0.46
ABCD4-218ENST00000553486 COL1A1P02452 1464 aaPredicted RBP17.9■□□□□ 0.46
ABCD4-218ENST00000553486 GRAPQ13588 217 aa17.9■□□□□ 0.46
ABCD4-218ENST00000553486 ATL3Q6DD88 541 aa17.9■□□□□ 0.46
ABCD4-218ENST00000553486 TNS4Q8IZW8 715 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms