RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 TMEM39BQ9GZU3 492 aa17.88■□□□□ 0.45
MTHFD1-204ENST00000553405 FLT1P17948 1338 aa17.88■□□□□ 0.45
MTHFD1-204ENST00000553405 NAV1Q8NEY1 1877 aa17.87■□□□□ 0.45
MTHFD1-204ENST00000553405 TGFBRAP1Q8WUH2 860 aa17.87■□□□□ 0.45
MTHFD1-204ENST00000553405 FAM151AQ8WW52 585 aa17.87■□□□□ 0.45
MTHFD1-204ENST00000553405 PPP2R3BQ9Y5P8 575 aa17.87■□□□□ 0.45
MTHFD1-204ENST00000553405 PAPPA2Q9BXP8 1791 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 GSG1L2A8MUP6 293 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 FSTL1Q12841 308 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 TNFAIP1Q13829 316 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 MCMDC2Q4G0Z9 681 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 PRAMEF18Q5VWM3 479 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 SULF1Q8IWU6 871 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 SDR42E1Q8WUS8 393 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 AIDAQ96BJ3 306 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 CDCA5Q96FF9 252 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 NOL10Q9BSC4 688 aaKnown RBP17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 OSBPL5Q9H0X9 879 aaPredicted RBP17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 EPB41L4AQ9HCS5 686 aaPredicted RBP17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 TMOD2Q9NZR1 351 aa17.86■□□□□ 0.45
MTHFD1-204ENST00000553405 DDTLA6NHG4 134 aaPredicted RBP17.85■□□□□ 0.45
MTHFD1-204ENST00000553405 HIP1O00291 1037 aa17.85■□□□□ 0.45
MTHFD1-204ENST00000553405 TCP10Q12799 353 aa17.85■□□□□ 0.45
MTHFD1-204ENST00000553405 VPS53Q5VIR6 699 aa17.85■□□□□ 0.45
MTHFD1-204ENST00000553405 MAPKAPK5Q8IW41 473 aa17.85■□□□□ 0.45
MTHFD1-204ENST00000553405 CRNKL1Q9BZJ0 848 aaKnown RBP17.85■□□□□ 0.45
MTHFD1-204ENST00000553405 DCP1AQ9NPI6 582 aaPredicted RBP17.85■□□□□ 0.45
MTHFD1-204ENST00000553405 MYH1P12882 1939 aa17.84■□□□□ 0.45
MTHFD1-204ENST00000553405 BAZ2AQ9UIF9 1905 aaKnown RBP17.84■□□□□ 0.45
MTHFD1-204ENST00000553405 TRPM7Q96QT4 1865 aa17.84■□□□□ 0.45
MTHFD1-204ENST00000553405 CCDC171Q6TFL3 1326 aa17.84■□□□□ 0.45
MTHFD1-204ENST00000553405 PICALMQ13492 652 aa17.84■□□□□ 0.45
MTHFD1-204ENST00000553405 NBPF12Q5TAG4 269 aaPredicted RBP17.84■□□□□ 0.45
MTHFD1-204ENST00000553405 CWC27Q6UX04 472 aaKnown RBP17.84■□□□□ 0.45
MTHFD1-204ENST00000553405 DIAPH3Q9NSV4 1193 aa17.84■□□□□ 0.45
MTHFD1-204ENST00000553405 RAD50Q92878 1312 aa17.83■□□□□ 0.44
MTHFD1-204ENST00000553405 SGSM2O43147 1006 aa17.83■□□□□ 0.44
MTHFD1-204ENST00000553405 MAP3K10Q02779 954 aa17.83■□□□□ 0.44
MTHFD1-204ENST00000553405 EVX2Q03828 476 aa17.83■□□□□ 0.44
MTHFD1-204ENST00000553405 CST9Q5W186 159 aa17.83■□□□□ 0.44
MTHFD1-204ENST00000553405 METTL16Q86W50 562 aaKnown RBP17.83■□□□□ 0.44
MTHFD1-204ENST00000553405 ATP8A2Q9NTI2 1148 aa17.83■□□□□ 0.44
MTHFD1-204ENST00000553405 SLC4A4Q9Y6R1 1079 aa17.83■□□□□ 0.44
MTHFD1-204ENST00000553405 SMIM22K7EJ46 135 aa17.82■□□□□ 0.44
MTHFD1-204ENST00000553405 SLURP2P0DP57 97 aa17.82■□□□□ 0.44
MTHFD1-204ENST00000553405 TNNI2P48788 182 aa17.82■□□□□ 0.44
MTHFD1-204ENST00000553405 GIMAP6Q6P9H5 292 aa17.82■□□□□ 0.44
MTHFD1-204ENST00000553405 PATL2C9JE40 543 aaKnown RBP17.81■□□□□ 0.44
MTHFD1-204ENST00000553405 CDC45O75419 566 aa17.81■□□□□ 0.44
MTHFD1-204ENST00000553405 GNAT2P19087 354 aa17.81■□□□□ 0.44
MTHFD1-204ENST00000553405 ESYT1Q9BSJ8 1104 aa17.81■□□□□ 0.44
MTHFD1-204ENST00000553405 DNAJC18Q9H819 358 aa17.81■□□□□ 0.44
MTHFD1-204ENST00000553405 PALD1Q9ULE6 856 aa17.81■□□□□ 0.44
MTHFD1-204ENST00000553405 HSPD1P10809 573 aaKnown RBP17.8■□□□□ 0.44
MTHFD1-204ENST00000553405 USP5P45974 858 aa17.8■□□□□ 0.44
MTHFD1-204ENST00000553405 ALX1Q15699 326 aa17.8■□□□□ 0.44
MTHFD1-204ENST00000553405 IFNL3Q8IZI9 196 aa17.8■□□□□ 0.44
MTHFD1-204ENST00000553405 SAP30BPQ9UHR5 308 aaKnown RBP17.8■□□□□ 0.44
MTHFD1-204ENST00000553405 LAMB1P07942 1786 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 ZMYM6O95789 1325 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 OTOFQ9HC10 1997 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 CYP2D6P10635 497 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 PLCD1P51178 756 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 GABPAQ06546 454 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 SBK1Q52WX2 424 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 CTR9Q6PD62 1173 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 CSRNP1Q96S65 589 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 DHX36Q9H2U1 1008 aaKnown RBP17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 FZD1Q9UP38 647 aa17.79■□□□□ 0.44
MTHFD1-204ENST00000553405 CYP2D7A0A087X1C5 515 aa17.78■□□□□ 0.44
MTHFD1-204ENST00000553405 MAP3K11Q16584 847 aa17.78■□□□□ 0.44
MTHFD1-204ENST00000553405 C12orf60Q5U649 245 aa17.78■□□□□ 0.44
MTHFD1-204ENST00000553405 EHD4Q9H223 541 aa17.78■□□□□ 0.44
MTHFD1-204ENST00000553405 MCM9Q9NXL9 1143 aa17.78■□□□□ 0.44
MTHFD1-204ENST00000553405 ROBO3Q96MS0 1386 aa17.78■□□□□ 0.44
MTHFD1-204ENST00000553405 USP17L12C9JPN9 530 aa17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 USP17L21D6R901 530 aa17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 TBC1D12O60347 775 aa17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 USP2O75604 605 aaPredicted RBP17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 CELF2O95319 508 aaKnown RBP17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 PTH1RQ03431 593 aa17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 SUPT20HL1Q3ZLR7 823 aa17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 RUFY2Q8WXA3 655 aa17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 LSG1Q9H089 658 aaKnown RBP17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 ZNF112Q9UJU3 913 aa17.77■□□□□ 0.44
MTHFD1-204ENST00000553405 LAMA4Q16363 1823 aa17.77■□□□□ 0.43
MTHFD1-204ENST00000553405 PHF20L1A8MW92 1017 aa17.76■□□□□ 0.43
MTHFD1-204ENST00000553405 FGAP02671 866 aa17.76■□□□□ 0.43
MTHFD1-204ENST00000553405 RRP1BQ14684 758 aaKnown RBP17.76■□□□□ 0.43
MTHFD1-204ENST00000553405 MOB2Q70IA6 237 aa17.76■□□□□ 0.43
MTHFD1-204ENST00000553405 NBPF3Q9H094 633 aa17.76■□□□□ 0.43
MTHFD1-204ENST00000553405 PI4KBQ9UBF8 816 aa17.76■□□□□ 0.43
MTHFD1-204ENST00000553405 TACC3Q9Y6A5 838 aa17.76■□□□□ 0.43
MTHFD1-204ENST00000553405 FAM196BA6NMK8 535 aa17.75■□□□□ 0.43
MTHFD1-204ENST00000553405 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
MTHFD1-204ENST00000553405 SLC4A8Q2Y0W8 1093 aa17.75■□□□□ 0.43
MTHFD1-204ENST00000553405 LDLRAD1Q5T700 205 aa17.75■□□□□ 0.43
MTHFD1-204ENST00000553405 MIGA2Q7L4E1 593 aa17.75■□□□□ 0.43
MTHFD1-204ENST00000553405 ZSCAN29Q8IWY8 852 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms