RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 PCNX4Q63HM2 1172 aa8.37□□□□□ -1.07
ATXN3-217ENST00000553287 ZAR1Q86SH2 424 aa8.37□□□□□ -1.07
ATXN3-217ENST00000553287 OSBPL1AQ9BXW6 950 aa8.37□□□□□ -1.07
ATXN3-217ENST00000553287 CACNA2D2Q9NY47 1150 aa8.37□□□□□ -1.07
ATXN3-217ENST00000553287 DYNC1LI2O43237 492 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-217ENST00000553287 TRIM37O94972 964 aa8.36□□□□□ -1.07
ATXN3-217ENST00000553287 GRIK1P39086 918 aa8.36□□□□□ -1.07
ATXN3-217ENST00000553287 TTLL4Q14679 1199 aa8.36□□□□□ -1.07
ATXN3-217ENST00000553287 XP32Q5T750 250 aa8.36□□□□□ -1.07
ATXN3-217ENST00000553287 TMC4Q7Z404 712 aa8.36□□□□□ -1.07
ATXN3-217ENST00000553287 SMYD4Q8IYR2 804 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-217ENST00000553287 PCMTD2Q9NV79 361 aa8.36□□□□□ -1.07
ATXN3-217ENST00000553287 LEMD3Q9Y2U8 911 aa8.36□□□□□ -1.07
ATXN3-217ENST00000553287 CSADQ9Y600 493 aa8.36□□□□□ -1.07
ATXN3-217ENST00000553287 HCLS1P14317 486 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-217ENST00000553287 INTS5Q6P9B9 1019 aaKnown RBP8.35□□□□□ -1.07
ATXN3-217ENST00000553287 SEZ6L2Q6UXD5 910 aa8.35□□□□□ -1.07
ATXN3-217ENST00000553287 SSU72Q9NP77 194 aaKnown RBP8.35□□□□□ -1.07
ATXN3-217ENST00000553287 C1GALT1Q9NS00 363 aa8.35□□□□□ -1.07
ATXN3-217ENST00000553287 PIM2Q9P1W9 311 aa8.35□□□□□ -1.07
ATXN3-217ENST00000553287 FAM170BA6NMN3 283 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 CD97P48960 835 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 ERVK-24P63145 666 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 TAF1CQ15572 869 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-217ENST00000553287 MEI1Q5TIA1 1274 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 DUSP27Q5VZP5 1158 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 SCARA3Q6AZY7 606 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 C12orf40Q86WS4 652 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 GATA6Q92908 595 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 PCOLCE2Q9UKZ9 415 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 PCDHA4Q9UN74 947 aa8.34□□□□□ -1.07
ATXN3-217ENST00000553287 DCDC2CA8MYV0 355 aa8.33□□□□□ -1.08
ATXN3-217ENST00000553287 SORBS3O60504 671 aa8.33□□□□□ -1.08
ATXN3-217ENST00000553287 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-217ENST00000553287 TMCO4Q5TGY1 634 aa8.33□□□□□ -1.08
ATXN3-217ENST00000553287 NBPF11Q86T75 865 aa8.33□□□□□ -1.08
ATXN3-217ENST00000553287 RNF214Q8ND24 703 aa8.33□□□□□ -1.08
ATXN3-217ENST00000553287 CTSHP09668 335 aa8.32□□□□□ -1.08
ATXN3-217ENST00000553287 HOXA10P31260 410 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-217ENST00000553287 MAP3K11Q16584 847 aa8.32□□□□□ -1.08
ATXN3-217ENST00000553287 PPM1JQ5JR12 505 aa8.32□□□□□ -1.08
ATXN3-217ENST00000553287 OGFOD3Q6PK18 319 aa8.32□□□□□ -1.08
ATXN3-217ENST00000553287 METTL22Q9BUU2 404 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-217ENST00000553287 BCL2L13Q9BXK5 485 aa8.32□□□□□ -1.08
ATXN3-217ENST00000553287 MRS2Q9HD23 443 aa8.32□□□□□ -1.08
ATXN3-217ENST00000553287 PICK1Q9NRD5 415 aa8.32□□□□□ -1.08
ATXN3-217ENST00000553287 NEFMP07197 916 aa8.31□□□□□ -1.08
ATXN3-217ENST00000553287 LMNB1P20700 586 aa8.31□□□□□ -1.08
ATXN3-217ENST00000553287 CYP27A1Q02318 531 aa8.31□□□□□ -1.08
ATXN3-217ENST00000553287 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.31□□□□□ -1.08
ATXN3-217ENST00000553287 ISL2Q96A47 359 aa8.31□□□□□ -1.08
ATXN3-217ENST00000553287 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
ATXN3-217ENST00000553287 CYP26A1O43174 497 aa8.3□□□□□ -1.08
ATXN3-217ENST00000553287 FOSL1P15407 271 aa8.3□□□□□ -1.08
ATXN3-217ENST00000553287 RPS26P62854 115 aaKnown RBP8.3□□□□□ -1.08
ATXN3-217ENST00000553287 RING1Q06587 406 aa8.3□□□□□ -1.08
ATXN3-217ENST00000553287 CDK5R2Q13319 367 aa8.3□□□□□ -1.08
ATXN3-217ENST00000553287 INPP5AQ14642 412 aa8.3□□□□□ -1.08
ATXN3-217ENST00000553287 CPSF6Q16630 551 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATXN3-217ENST00000553287 ZNF765Q7L2R6 523 aa8.3□□□□□ -1.08
ATXN3-217ENST00000553287 ELMO3Q96BJ8 720 aa8.3□□□□□ -1.08
ATXN3-217ENST00000553287 VTI1BQ9UEU0 232 aa8.3□□□□□ -1.08
ATXN3-217ENST00000553287 KIAA1324LA8MWY0 1029 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-217ENST00000553287 ST13P50502 369 aaKnown RBP8.29□□□□□ -1.08
ATXN3-217ENST00000553287 ZNF326Q5BKZ1 582 aaKnown RBP8.29□□□□□ -1.08
ATXN3-217ENST00000553287 AGMOQ6ZNB7 445 aa8.29□□□□□ -1.08
ATXN3-217ENST00000553287 PCDHB5Q9Y5E4 795 aa8.29□□□□□ -1.08
ATXN3-217ENST00000553287 FANCGO15287 622 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 RLBP1P12271 317 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 LIG3P49916 1009 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 CYP27C1Q4G0S4 372 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 LRFN4Q6PJG9 635 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 HDXQ7Z353 690 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 DTX1Q86Y01 620 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 GIPC2Q8TF65 315 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 NOC4LQ9BVI4 516 aaKnown RBP8.28□□□□□ -1.08
ATXN3-217ENST00000553287 LRRC4CQ9HCJ2 640 aa8.28□□□□□ -1.08
ATXN3-217ENST00000553287 FAM87AP0C7U9 286 aa8.27□□□□□ -1.09
ATXN3-217ENST00000553287 ITGAEP38570 1179 aa8.27□□□□□ -1.09
ATXN3-217ENST00000553287 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-217ENST00000553287 PLPPR2Q96GM1 343 aa8.27□□□□□ -1.09
ATXN3-217ENST00000553287 CCDC180Q9P1Z9 1646 aa8.27□□□□□ -1.09
ATXN3-217ENST00000553287 SPINK2P20155 84 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 NTF4P34130 210 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 CDK8P49336 464 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 SEPT6Q14141 434 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 ZBTB37Q5TC79 503 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 ZNF507Q8TCN5 953 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 JARID2Q92833 1246 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-217ENST00000553287 GAL3ST3Q96A11 431 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 CRELD1Q96HD1 420 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 PSMG3-AS1Q96PY0 264 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 TLR6Q9Y2C9 796 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 SNCAIPQ9Y6H5 919 aa8.26□□□□□ -1.09
ATXN3-217ENST00000553287 LEFTY1O75610 366 aa8.25□□□□□ -1.09
ATXN3-217ENST00000553287 TFE3P19532 575 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-217ENST00000553287 DUSP23Q9BVJ7 150 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms