RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 TFCP2Q12800 502 aa11.62□□□□□ -0.55
CHD8-203ENST00000553283 MTX1Q13505 466 aa11.62□□□□□ -0.55
CHD8-203ENST00000553283 FASTKD5Q7L8L6 764 aaKnown RBP11.62□□□□□ -0.55
CHD8-203ENST00000553283 DZIP1Q86YF9 867 aaKnown RBP11.62□□□□□ -0.55
CHD8-203ENST00000553283 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
CHD8-203ENST00000553283 XAGE2Q96GT9 111 aa11.62□□□□□ -0.55
CHD8-203ENST00000553283 PICK1Q9NRD5 415 aa11.62□□□□□ -0.55
CHD8-203ENST00000553283 AFG3L2Q9Y4W6 797 aa11.62□□□□□ -0.55
CHD8-203ENST00000553283 RBBP6Q7Z6E9 1792 aaKnown RBP11.62□□□□□ -0.55
CHD8-203ENST00000553283 CEP290O15078 2479 aa11.61□□□□□ -0.55
CHD8-203ENST00000553283 GPR75-ASB3A0A0A6YYF3 556 aa11.61□□□□□ -0.55
CHD8-203ENST00000553283 A0A0G2JLL6 359 aaPredicted RBP11.61□□□□□ -0.55
CHD8-203ENST00000553283 DDTLA6NHG4 134 aaPredicted RBP11.61□□□□□ -0.55
CHD8-203ENST00000553283 CTNND1O60716 968 aaKnown RBP11.61□□□□□ -0.55
CHD8-203ENST00000553283 BCRP11274 1271 aa11.61□□□□□ -0.55
CHD8-203ENST00000553283 GRK4P32298 578 aa11.61□□□□□ -0.55
CHD8-203ENST00000553283 BTDP43251 543 aa11.61□□□□□ -0.55
CHD8-203ENST00000553283 MVPQ14764 893 aaKnown RBP11.61□□□□□ -0.55
CHD8-203ENST00000553283 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
CHD8-203ENST00000553283 PRRT2Q7Z6L0 340 aaPredicted RBP11.61□□□□□ -0.55
CHD8-203ENST00000553283 RAET1EQ8TD07 263 aa11.61□□□□□ -0.55
CHD8-203ENST00000553283 DDX4Q9NQI0 724 aaKnown RBP11.61□□□□□ -0.55
CHD8-203ENST00000553283 CENPFP49454 3210 aa11.61□□□□□ -0.55
CHD8-203ENST00000553283 MKI67P46013 3256 aaKnown RBP11.61□□□□□ -0.55
CHD8-203ENST00000553283 RFX7Q2KHR2 1363 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
CHD8-203ENST00000553283 NPM3O75607 178 aaKnown RBP11.6□□□□□ -0.55
CHD8-203ENST00000553283 FCGRTP55899 365 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 MECOMQ03112 1051 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 PICALMQ13492 652 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 MTFR1Q15390 333 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 NKX2-3Q8TAU0 364 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 NEUROD6Q96NK8 337 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 SLC45A1Q9Y2W3 748 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 MROH7-TTC4A0A0A0MT08 1334 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
CHD8-203ENST00000553283 CCER2I3L3R5 266 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 TBC1D12O60347 775 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 MAP4K4O95819 1239 aaPredicted RBP11.59□□□□□ -0.55
CHD8-203ENST00000553283 LDHCP07864 332 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 SLURP2P0DP57 97 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 RHBDL3P58872 404 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 PRKCZQ05513 592 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 GADL1Q6ZQY3 521 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 ZNF384Q8TF68 577 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
CHD8-203ENST00000553283 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
CHD8-203ENST00000553283 AK9Q5TCS8 1911 aa11.58□□□□□ -0.55
CHD8-203ENST00000553283 H0YGN5 161 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 GNAI2P04899 355 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 GJB1P08034 283 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 CCL5P13501 91 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 GJA8P48165 433 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 UBXN2AP68543 259 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 GSTO1P78417 241 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 GORABQ5T7V8 394 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 NSUN4Q96CB9 384 aaKnown RBP11.58□□□□□ -0.56
CHD8-203ENST00000553283 SHISA4Q96DD7 197 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 RNF208Q9H0X6 261 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 BIN2Q9UBW5 565 aaPredicted RBP11.58□□□□□ -0.56
CHD8-203ENST00000553283 COLQQ9Y215 455 aaPredicted RBP11.58□□□□□ -0.56
CHD8-203ENST00000553283 MYH13Q9UKX3 1938 aa11.58□□□□□ -0.56
CHD8-203ENST00000553283 TRIM75PA6NK02 468 aa11.57□□□□□ -0.56
CHD8-203ENST00000553283 TRIM27P14373 513 aa11.57□□□□□ -0.56
CHD8-203ENST00000553283 ARID4AP29374 1257 aaPredicted RBP11.57□□□□□ -0.56
CHD8-203ENST00000553283 G3BP1Q13283 466 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD8-203ENST00000553283 PI16Q6UXB8 463 aa11.57□□□□□ -0.56
CHD8-203ENST00000553283 ATF7IPQ6VMQ6 1270 aa11.57□□□□□ -0.56
CHD8-203ENST00000553283 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
CHD8-203ENST00000553283 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD8-203ENST00000553283 RAI14Q9P0K7 980 aa11.57□□□□□ -0.56
CHD8-203ENST00000553283 GABRQQ9UN88 632 aa11.57□□□□□ -0.56
CHD8-203ENST00000553283 ZSWIM8A7E2V4 1837 aa11.57□□□□□ -0.56
CHD8-203ENST00000553283 PNMA6EA0A0J9YXQ4 647 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 ADCY3O60266 1144 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 BCAR3O75815 825 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 UQCRFS1P1P0C7P4 283 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 FLT3LGP49771 235 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 FXR1P51114 621 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHD8-203ENST00000553283 UBE2Q1Q7Z7E8 422 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 CCDC84Q86UT8 332 aaPredicted RBP11.56□□□□□ -0.56
CHD8-203ENST00000553283 SMCR8Q8TEV9 937 aaPredicted RBP11.56□□□□□ -0.56
CHD8-203ENST00000553283 DPF3Q92784 378 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 OSBPL5Q9H0X9 879 aaPredicted RBP11.56□□□□□ -0.56
CHD8-203ENST00000553283 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.56□□□□□ -0.56
CHD8-203ENST00000553283 AGTPBP1Q9UPW5 1226 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 TNNQ9UQP3 1299 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 MYH2Q9UKX2 1941 aa11.56□□□□□ -0.56
CHD8-203ENST00000553283 BRCA2P51587 3418 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 FAM196BA6NMK8 535 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 TNPO2O14787 897 aaKnown RBP11.55□□□□□ -0.56
CHD8-203ENST00000553283 MCAMP43121 646 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 SPP2Q13103 211 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 IRF5Q13568 498 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 TREML2Q5T2D2 321 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 PROCA1Q8NCQ7 364 aaPredicted RBP11.55□□□□□ -0.56
CHD8-203ENST00000553283 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 U2AF1L4Q8WU68 220 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms