RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 M0R2C6 588 aa20.59■□□□□ 0.89
ITGA5-213ENST00000553071 CACNB3P54284 484 aa20.59■□□□□ 0.89
ITGA5-213ENST00000553071 NFIAQ12857 509 aa20.59■□□□□ 0.89
ITGA5-213ENST00000553071 PICALMQ13492 652 aa20.59■□□□□ 0.89
ITGA5-213ENST00000553071 KIAA1211Q6ZU35 1233 aa20.59■□□□□ 0.89
ITGA5-213ENST00000553071 TTC6Q86TZ1 520 aa20.59■□□□□ 0.89
ITGA5-213ENST00000553071 ZSCAN29Q8IWY8 852 aaPredicted RBP20.59■□□□□ 0.89
ITGA5-213ENST00000553071 SEC62Q99442 399 aaKnown RBP20.59■□□□□ 0.89
ITGA5-213ENST00000553071 OSBPL5Q9H0X9 879 aaPredicted RBP20.59■□□□□ 0.89
ITGA5-213ENST00000553071 FAM198AQ9UFP1 575 aa20.59■□□□□ 0.89
ITGA5-213ENST00000553071 MYH7P12883 1935 aa20.59■□□□□ 0.89
ITGA5-213ENST00000553071 HLA-DOAP06340 250 aa20.58■□□□□ 0.89
ITGA5-213ENST00000553071 TCP10Q12799 353 aa20.58■□□□□ 0.89
ITGA5-213ENST00000553071 MAPKAPK5Q8IW41 473 aa20.58■□□□□ 0.89
ITGA5-213ENST00000553071 FLT1P17948 1338 aa20.57■□□□□ 0.88
ITGA5-213ENST00000553071 SGSM2O43147 1006 aa20.57■□□□□ 0.88
ITGA5-213ENST00000553071 GLIS2Q9BZE0 524 aaPredicted RBP20.57■□□□□ 0.88
ITGA5-213ENST00000553071 DCP1AQ9NPI6 582 aaPredicted RBP20.57■□□□□ 0.88
ITGA5-213ENST00000553071 MCM9Q9NXL9 1143 aa20.57■□□□□ 0.88
ITGA5-213ENST00000553071 PI4KBQ9UBF8 816 aa20.57■□□□□ 0.88
ITGA5-213ENST00000553071 COL2A1P02458 1487 aaPredicted RBP20.56■□□□□ 0.88
ITGA5-213ENST00000553071 GSG1L2A8MUP6 293 aa20.56■□□□□ 0.88
ITGA5-213ENST00000553071 ITGBL1O95965 494 aaPredicted RBP20.56■□□□□ 0.88
ITGA5-213ENST00000553071 POLR3DP05423 398 aaPredicted RBP20.56■□□□□ 0.88
ITGA5-213ENST00000553071 ALX1Q15699 326 aa20.56■□□□□ 0.88
ITGA5-213ENST00000553071 DCAF15Q66K64 600 aa20.56■□□□□ 0.88
ITGA5-213ENST00000553071 FOXP4Q8IVH2 680 aaPredicted RBP20.56■□□□□ 0.88
ITGA5-213ENST00000553071 SDR42E1Q8WUS8 393 aa20.56■□□□□ 0.88
ITGA5-213ENST00000553071 ESYT1Q9BSJ8 1104 aa20.56■□□□□ 0.88
ITGA5-213ENST00000553071 DSCC1Q9BVC3 393 aa20.56■□□□□ 0.88
ITGA5-213ENST00000553071 TMEM39BQ9GZU3 492 aa20.56■□□□□ 0.88
ITGA5-213ENST00000553071 DDX4Q9NQI0 724 aaKnown RBP20.56■□□□□ 0.88
ITGA5-213ENST00000553071 ARPP21Q9UBL0 812 aaPredicted RBP20.56■□□□□ 0.88
ITGA5-213ENST00000553071 MKRN1Q9UHC7 482 aaKnown RBP20.56■□□□□ 0.88
ITGA5-213ENST00000553071 CTNNA3Q9UI47 895 aa20.56■□□□□ 0.88
ITGA5-213ENST00000553071 AK9Q5TCS8 1911 aa20.55■□□□□ 0.88
ITGA5-213ENST00000553071 PRKAB2O43741 272 aa20.55■□□□□ 0.88
ITGA5-213ENST00000553071 PPP1R12BO60237 982 aaPredicted RBP20.55■□□□□ 0.88
ITGA5-213ENST00000553071 HSPD1P10809 573 aaKnown RBP20.55■□□□□ 0.88
ITGA5-213ENST00000553071 TDO2P48775 406 aa20.55■□□□□ 0.88
ITGA5-213ENST00000553071 IFNL3Q8IZI9 196 aa20.55■□□□□ 0.88
ITGA5-213ENST00000553071 NAPBQ9H115 298 aa20.55■□□□□ 0.88
ITGA5-213ENST00000553071 CNTNAP1P78357 1384 aa20.55■□□□□ 0.88
ITGA5-213ENST00000553071 ATRNL1Q5VV63 1379 aa20.55■□□□□ 0.88
ITGA5-213ENST00000553071 ADAMTSL1Q8N6G6 1762 aa20.54■□□□□ 0.88
ITGA5-213ENST00000553071 ADM5C9JUS6 153 aa20.54■□□□□ 0.88
ITGA5-213ENST00000553071 SBK1Q52WX2 424 aa20.54■□□□□ 0.88
ITGA5-213ENST00000553071 CCDC129Q6ZRS4 1044 aa20.54■□□□□ 0.88
ITGA5-213ENST00000553071 ZNF589Q86UQ0 364 aaPredicted RBP20.54■□□□□ 0.88
ITGA5-213ENST00000553071 CDCA5Q96FF9 252 aa20.54■□□□□ 0.88
ITGA5-213ENST00000553071 CSRNP1Q96S65 589 aa20.54■□□□□ 0.88
ITGA5-213ENST00000553071 ECM29Q5VYK3 1845 aa20.53■□□□□ 0.88
ITGA5-213ENST00000553071 TBC1D12O60347 775 aa20.53■□□□□ 0.88
ITGA5-213ENST00000553071 REC8O95072 547 aa20.53■□□□□ 0.88
ITGA5-213ENST00000553071 SLC3A2P08195 630 aaKnown RBP20.53■□□□□ 0.88
ITGA5-213ENST00000553071 FKBP1BP68106 108 aa20.53■□□□□ 0.88
ITGA5-213ENST00000553071 TEPSINQ96N21 525 aa20.53■□□□□ 0.88
ITGA5-213ENST00000553071 TRIM34Q9BYJ4 488 aa20.53■□□□□ 0.88
ITGA5-213ENST00000553071 ZNF287Q9HBT7 754 aa20.53■□□□□ 0.88
ITGA5-213ENST00000553071 HERC5Q9UII4 1024 aaKnown RBP20.53■□□□□ 0.88
ITGA5-213ENST00000553071 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
ITGA5-213ENST00000553071 USP17L12C9JPN9 530 aa20.52■□□□□ 0.88
ITGA5-213ENST00000553071 USP17L21D6R901 530 aa20.52■□□□□ 0.88
ITGA5-213ENST00000553071 ZFPM1Q8IX07 1006 aa20.52■□□□□ 0.88
ITGA5-213ENST00000553071 EHD4Q9H223 541 aa20.52■□□□□ 0.88
ITGA5-213ENST00000553071 PALD1Q9ULE6 856 aa20.52■□□□□ 0.88
ITGA5-213ENST00000553071 DDTLA6NHG4 134 aaPredicted RBP20.51■□□□□ 0.87
ITGA5-213ENST00000553071 UNCXA6NJT0 531 aa20.51■□□□□ 0.87
ITGA5-213ENST00000553071 EPB41L2O43491 1005 aaKnown RBP20.51■□□□□ 0.87
ITGA5-213ENST00000553071 NBPF12Q5TAG4 269 aaPredicted RBP20.51■□□□□ 0.87
ITGA5-213ENST00000553071 C12orf60Q5U649 245 aa20.51■□□□□ 0.87
ITGA5-213ENST00000553071 ARMC9Q7Z3E5 817 aa20.51■□□□□ 0.87
ITGA5-213ENST00000553071 CRACR2BQ8N4Y2 399 aaPredicted RBP20.51■□□□□ 0.87
ITGA5-213ENST00000553071 C2orf69Q8N8R5 385 aa20.51■□□□□ 0.87
ITGA5-213ENST00000553071 SAP30BPQ9UHR5 308 aaKnown RBP20.51■□□□□ 0.87
ITGA5-213ENST00000553071 SERPINB13Q9UIV8 391 aa20.51■□□□□ 0.87
ITGA5-213ENST00000553071 SCAF8Q9UPN6 1271 aaKnown RBP20.51■□□□□ 0.87
ITGA5-213ENST00000553071 U3KPZ7 1027 aaPredicted RBP20.51■□□□□ 0.87
ITGA5-213ENST00000553071 FGAP02671 866 aa20.5■□□□□ 0.87
ITGA5-213ENST00000553071 MAP3K10Q02779 954 aa20.5■□□□□ 0.87
ITGA5-213ENST00000553071 CTR9Q6PD62 1173 aa20.5■□□□□ 0.87
ITGA5-213ENST00000553071 SWAP70Q9UH65 585 aa20.5■□□□□ 0.87
ITGA5-213ENST00000553071 PASKQ96RG2 1323 aa20.5■□□□□ 0.87
ITGA5-213ENST00000553071 TRAF5O00463 557 aa20.49■□□□□ 0.87
ITGA5-213ENST00000553071 CELF2O95319 508 aaKnown RBP20.49■□□□□ 0.87
ITGA5-213ENST00000553071 IREB2P48200 963 aaKnown RBP20.49■□□□□ 0.87
ITGA5-213ENST00000553071 VPS53Q5VIR6 699 aa20.49■□□□□ 0.87
ITGA5-213ENST00000553071 PRAMEF18Q5VWM3 479 aa20.49■□□□□ 0.87
ITGA5-213ENST00000553071 SH3BP5LQ7L8J4 393 aa20.49■□□□□ 0.87
ITGA5-213ENST00000553071 METTL16Q86W50 562 aaKnown RBP20.49■□□□□ 0.87
ITGA5-213ENST00000553071 ZNF341Q9BYN7 854 aa20.49■□□□□ 0.87
ITGA5-213ENST00000553071 ANO2Q9NQ90 1003 aa20.49■□□□□ 0.87
ITGA5-213ENST00000553071 MINDY4BA8MYZ0 360 aa20.48■□□□□ 0.87
ITGA5-213ENST00000553071 NT5C2P49902 561 aa20.48■□□□□ 0.87
ITGA5-213ENST00000553071 TTLL12Q14166 644 aaPredicted RBP20.48■□□□□ 0.87
ITGA5-213ENST00000553071 IMMTQ16891 758 aaKnown RBP20.48■□□□□ 0.87
ITGA5-213ENST00000553071 MAP4K1Q92918 833 aa20.48■□□□□ 0.87
ITGA5-213ENST00000553071 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.48■□□□□ 0.87
ITGA5-213ENST00000553071 EPB41L4AQ9HCS5 686 aaPredicted RBP20.48■□□□□ 0.87
ITGA5-213ENST00000553071 POLR2AP24928 1970 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms