RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 ZHX2Q9Y6X8 837 aa11.22□□□□□ -0.61
PRKCH-203ENST00000552875 NCOR1O75376 2440 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 MSCO60682 206 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 CYP2B6P20813 491 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 CACNB3P54284 484 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 NUDT12Q9BQG2 462 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 KCNH6Q9H252 994 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 GJD2Q9UKL4 321 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 AGTPBP1Q9UPW5 1226 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 MUC6Q6W4X9 2439 aa11.21□□□□□ -0.61
PRKCH-203ENST00000552875 ARAP2Q8WZ64 1704 aa11.21□□□□□ -0.62
PRKCH-203ENST00000552875 PRR33A8MZF0 331 aa11.2□□□□□ -0.62
PRKCH-203ENST00000552875 DNM1LO00429 736 aa11.2□□□□□ -0.62
PRKCH-203ENST00000552875 DDX58O95786 925 aaKnown RBP11.2□□□□□ -0.62
PRKCH-203ENST00000552875 ITGA6P23229 1130 aa11.2□□□□□ -0.62
PRKCH-203ENST00000552875 PABPC4Q13310 644 aaKnown RBP eCLIP11.2□□□□□ -0.62
PRKCH-203ENST00000552875 NHLH1Q02575 133 aa11.19□□□□□ -0.62
PRKCH-203ENST00000552875 CACNB2Q08289 660 aaPredicted RBP11.19□□□□□ -0.62
PRKCH-203ENST00000552875 PRDM12Q9H4Q4 367 aa11.19□□□□□ -0.62
PRKCH-203ENST00000552875 MYBBP1AQ9BQG0 1328 aaKnown RBP11.18□□□□□ -0.62
PRKCH-203ENST00000552875 TAF5LO75529 589 aa11.18□□□□□ -0.62
PRKCH-203ENST00000552875 CCDC129Q6ZRS4 1044 aa11.18□□□□□ -0.62
PRKCH-203ENST00000552875 CCAR1Q8IX12 1150 aaKnown RBP11.18□□□□□ -0.62
PRKCH-203ENST00000552875 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
PRKCH-203ENST00000552875 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
PRKCH-203ENST00000552875 LPAR1Q92633 364 aa11.18□□□□□ -0.62
PRKCH-203ENST00000552875 ZDHHC15Q96MV8 337 aa11.18□□□□□ -0.62
PRKCH-203ENST00000552875 METTL22Q9BUU2 404 aaPredicted RBP11.18□□□□□ -0.62
PRKCH-203ENST00000552875 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
PRKCH-203ENST00000552875 MAST3O60307 1309 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 ST18O60284 1047 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 CCND3P30281 292 aaPredicted RBP11.17□□□□□ -0.62
PRKCH-203ENST00000552875 NEXNQ0ZGT2 675 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 SKIV2LQ15477 1246 aaKnown RBP11.17□□□□□ -0.62
PRKCH-203ENST00000552875 CSPP1Q1MSJ5 1256 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 CCDC174Q6PII3 467 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 ARRDC4Q8NCT1 418 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 TBC1D22AQ8WUA7 517 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 PLEKHF1Q96S99 279 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 MRIQ9BWK5 157 aa11.17□□□□□ -0.62
PRKCH-203ENST00000552875 ANKRD18BA2A2Z9 1011 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 TRIM75PA6NK02 468 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 KBTBD13C9JR72 458 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 PTPRAP18433 802 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 RGS2P41220 211 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 RIPK4P57078 832 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 FPGSQ05932 587 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 KRT24Q2M2I5 525 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 MFSD14CQ5VZR4 134 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 SLC39A5Q6ZMH5 540 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 TDRD7Q8NHU6 1098 aaKnown RBP11.16□□□□□ -0.62
PRKCH-203ENST00000552875 HERVK_113Q902F9 699 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 UIMC1Q96RL1 719 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 C11orf16Q9NQ32 467 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
PRKCH-203ENST00000552875 PDLIM7Q9NR12 457 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 TACC3Q9Y6A5 838 aa11.16□□□□□ -0.62
PRKCH-203ENST00000552875 PI4K2BG5E9Z4 385 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 SNAP23O00161 211 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 ERC2O15083 957 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 RAG1P15918 1043 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 MAPK4P31152 587 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 HIBADHP31937 336 aaKnown RBP11.15□□□□□ -0.62
PRKCH-203ENST00000552875 KCNQ1P51787 676 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 TFF2Q03403 129 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 PROCA1Q8NCQ7 364 aaPredicted RBP11.15□□□□□ -0.62
PRKCH-203ENST00000552875 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 DDX20Q9UHI6 824 aaKnown RBP11.15□□□□□ -0.62
PRKCH-203ENST00000552875 MSRAQ9UJ68 235 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 MAST2Q6P0Q8 1798 aa11.15□□□□□ -0.62
PRKCH-203ENST00000552875 FRAT2O75474 233 aaPredicted RBP11.14□□□□□ -0.63
PRKCH-203ENST00000552875 CNGA1P29973 690 aa11.14□□□□□ -0.63
PRKCH-203ENST00000552875 PPP2R1AP30153 589 aa11.14□□□□□ -0.63
PRKCH-203ENST00000552875 RAB30Q15771 203 aa11.14□□□□□ -0.63
PRKCH-203ENST00000552875 TRIM60Q495X7 471 aa11.14□□□□□ -0.63
PRKCH-203ENST00000552875 VPS37DQ86XT2 251 aa11.14□□□□□ -0.63
PRKCH-203ENST00000552875 APBA2Q99767 749 aa11.14□□□□□ -0.63
PRKCH-203ENST00000552875 CWC22Q9HCG8 908 aaKnown RBP11.14□□□□□ -0.63
PRKCH-203ENST00000552875 COG5Q9UP83 839 aa11.14□□□□□ -0.63
PRKCH-203ENST00000552875 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
PRKCH-203ENST00000552875 LRRFIP2Q9Y608 721 aaKnown RBP11.14□□□□□ -0.63
PRKCH-203ENST00000552875 TRIM43BA6NCK2 446 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 CHL1O00533 1208 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 TCP10Q12799 353 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 IFIT5Q13325 482 aaKnown RBP11.13□□□□□ -0.63
PRKCH-203ENST00000552875 ADGRE1Q14246 886 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 C1orf53Q5VUE5 145 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 APOBEC3HQ6NTF7 200 aaKnown RBP11.13□□□□□ -0.63
PRKCH-203ENST00000552875 UBE3BQ7Z3V4 1068 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 MICALL1Q8N3F8 863 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 TRIM43Q96BQ3 446 aaPredicted RBP11.13□□□□□ -0.63
PRKCH-203ENST00000552875 PBX4Q9BYU1 374 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 PHAXQ9H814 394 aaKnown RBP11.13□□□□□ -0.63
PRKCH-203ENST00000552875 MORF4L1Q9UBU8 362 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 SUGT1Q9Y2Z0 365 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 LTBP2Q14767 1821 aa11.13□□□□□ -0.63
PRKCH-203ENST00000552875 CTNND1O60716 968 aaKnown RBP11.12□□□□□ -0.63
PRKCH-203ENST00000552875 CLTBP09497 229 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms