RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 PRRT2Q7Z6L0 340 aaPredicted RBP14.4□□□□□ -0.1
SUPT16H-202ENST00000552829 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.4□□□□□ -0.1
SUPT16H-202ENST00000552829 VCANP13611 3396 aa14.39□□□□□ -0.11
SUPT16H-202ENST00000552829 PRUNE2Q8WUY3 3088 aa14.39□□□□□ -0.11
SUPT16H-202ENST00000552829 DDX60LQ5H9U9 1706 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-202ENST00000552829 PHF20L1A8MW92 1017 aa14.39□□□□□ -0.11
SUPT16H-202ENST00000552829 GRM8O00222 908 aa14.39□□□□□ -0.11
SUPT16H-202ENST00000552829 FASTKD5Q7L8L6 764 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-202ENST00000552829 KAZALD1Q96I82 304 aa14.39□□□□□ -0.11
SUPT16H-202ENST00000552829 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.39□□□□□ -0.11
SUPT16H-202ENST00000552829 MAST3O60307 1309 aa14.39□□□□□ -0.11
SUPT16H-202ENST00000552829 ATRNL1Q5VV63 1379 aa14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 SPTBN5Q9NRC6 3674 aaKnown RBP14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 F6X3S4 739 aa14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 TNPO2O14787 897 aaKnown RBP14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 FAM109BQ6ICB4 259 aaPredicted RBP14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 VGLL2Q8N8G2 317 aa14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 NBPF3Q9H094 633 aa14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 AFG3L2Q9Y4W6 797 aa14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 MROH5Q6ZUA9 1318 aa14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 COL2A1P02458 1487 aaPredicted RBP14.38□□□□□ -0.11
SUPT16H-202ENST00000552829 SYN1P17600 705 aa14.37□□□□□ -0.11
SUPT16H-202ENST00000552829 PTPRAP18433 802 aa14.37□□□□□ -0.11
SUPT16H-202ENST00000552829 NFIAQ12857 509 aa14.37□□□□□ -0.11
SUPT16H-202ENST00000552829 CDC42EP5Q6NZY7 148 aa14.37□□□□□ -0.11
SUPT16H-202ENST00000552829 VPS37DQ86XT2 251 aa14.37□□□□□ -0.11
SUPT16H-202ENST00000552829 GUCD1Q96NT3 240 aa14.37□□□□□ -0.11
SUPT16H-202ENST00000552829 FAM198AQ9UFP1 575 aa14.37□□□□□ -0.11
SUPT16H-202ENST00000552829 DNAH12Q6ZR08 3092 aa14.37□□□□□ -0.11
SUPT16H-202ENST00000552829 MYH13Q9UKX3 1938 aa14.37□□□□□ -0.11
SUPT16H-202ENST00000552829 PLXNB2O15031 1838 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 VAMP4O75379 141 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 MAP3K10Q02779 954 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 CCDC27Q2M243 656 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 UBE2OQ9C0C9 1292 aaKnown RBP14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 GJD2Q9UKL4 321 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 OGDHLQ9ULD0 1010 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 DAGLAQ9Y4D2 1042 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 ZHX2Q9Y6X8 837 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 RPTORQ8N122 1335 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 KIF16BQ96L93 1317 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 EYSQ5T1H1 3165 aa14.36□□□□□ -0.11
SUPT16H-202ENST00000552829 FRAT2O75474 233 aaPredicted RBP14.35□□□□□ -0.11
SUPT16H-202ENST00000552829 TCP10Q12799 353 aa14.35□□□□□ -0.11
SUPT16H-202ENST00000552829 CAVIN4Q5BKX8 364 aa14.35□□□□□ -0.11
SUPT16H-202ENST00000552829 ZFPM1Q8IX07 1006 aa14.35□□□□□ -0.11
SUPT16H-202ENST00000552829 SCYL3Q8IZE3 742 aa14.35□□□□□ -0.11
SUPT16H-202ENST00000552829 COA7Q96BR5 231 aa14.35□□□□□ -0.11
SUPT16H-202ENST00000552829 C11orf49Q9H6J7 331 aa14.35□□□□□ -0.11
SUPT16H-202ENST00000552829 DOCK2Q92608 1830 aa14.35□□□□□ -0.11
SUPT16H-202ENST00000552829 IL16Q14005 1332 aa14.35□□□□□ -0.11
SUPT16H-202ENST00000552829 DOCK1Q14185 1865 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 PDE8BO95263 885 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 HMGCRP04035 888 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 FGFR2P21802 821 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 TRIM32Q13049 653 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 FAM110CQ1W6H9 321 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 LRRC24Q50LG9 513 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 GADL1Q6ZQY3 521 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 WWC1Q8IX03 1113 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 SUCLG2Q96I99 432 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 PRDM6Q9NQX0 595 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 PFASO15067 1338 aa14.34□□□□□ -0.11
SUPT16H-202ENST00000552829 ALDH1L1O75891 902 aa14.33□□□□□ -0.12
SUPT16H-202ENST00000552829 COL6A1P12109 1028 aa14.33□□□□□ -0.12
SUPT16H-202ENST00000552829 RABL6Q3YEC7 729 aaPredicted RBP14.33□□□□□ -0.12
SUPT16H-202ENST00000552829 MAP3K21Q5TCX8 1036 aa14.33□□□□□ -0.12
SUPT16H-202ENST00000552829 ANKRD13CQ8N6S4 541 aa14.33□□□□□ -0.12
SUPT16H-202ENST00000552829 HMX1Q9NP08 348 aaPredicted RBP14.33□□□□□ -0.12
SUPT16H-202ENST00000552829 AGTPBP1Q9UPW5 1226 aa14.33□□□□□ -0.12
SUPT16H-202ENST00000552829 DIXDC1Q155Q3 683 aa14.32□□□□□ -0.12
SUPT16H-202ENST00000552829 METTL24Q5JXM2 366 aa14.32□□□□□ -0.12
SUPT16H-202ENST00000552829 MIER1Q8N108 512 aa14.32□□□□□ -0.12
SUPT16H-202ENST00000552829 WDR66Q8TBY9 1149 aa14.32□□□□□ -0.12
SUPT16H-202ENST00000552829 SMCR8Q8TEV9 937 aaPredicted RBP14.32□□□□□ -0.12
SUPT16H-202ENST00000552829 PICK1Q9NRD5 415 aa14.32□□□□□ -0.12
SUPT16H-202ENST00000552829 C9orf78Q9NZ63 289 aaPredicted RBP14.32□□□□□ -0.12
SUPT16H-202ENST00000552829 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
SUPT16H-202ENST00000552829 UTYO14607 1347 aa14.32□□□□□ -0.12
SUPT16H-202ENST00000552829 MYH2Q9UKX2 1941 aa14.31□□□□□ -0.12
SUPT16H-202ENST00000552829 SH3BP5LQ7L8J4 393 aa14.31□□□□□ -0.12
SUPT16H-202ENST00000552829 IDI2Q9BXS1 227 aa14.31□□□□□ -0.12
SUPT16H-202ENST00000552829 PRKRIP1Q9H875 184 aaPredicted RBP14.31□□□□□ -0.12
SUPT16H-202ENST00000552829 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
SUPT16H-202ENST00000552829 RFX7Q2KHR2 1363 aa14.31□□□□□ -0.12
SUPT16H-202ENST00000552829 LOC285556D6RIA3 1793 aa14.3□□□□□ -0.12
SUPT16H-202ENST00000552829 CTNND1O60716 968 aaKnown RBP14.3□□□□□ -0.12
SUPT16H-202ENST00000552829 TREML2Q5T2D2 321 aa14.3□□□□□ -0.12
SUPT16H-202ENST00000552829 ANKRD44Q8N8A2 993 aa14.3□□□□□ -0.12
SUPT16H-202ENST00000552829 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
SUPT16H-202ENST00000552829 ENTPD3O75355 529 aa14.29□□□□□ -0.12
SUPT16H-202ENST00000552829 NBPF7P0C2Y1 421 aaPredicted RBP14.29□□□□□ -0.12
SUPT16H-202ENST00000552829 SLURP2P0DP57 97 aa14.29□□□□□ -0.12
SUPT16H-202ENST00000552829 PRDX5P30044 214 aa14.29□□□□□ -0.12
SUPT16H-202ENST00000552829 GCLCP48506 637 aaPredicted RBP14.29□□□□□ -0.12
SUPT16H-202ENST00000552829 RGS3P49796 1198 aa14.29□□□□□ -0.12
SUPT16H-202ENST00000552829 IFNLR1Q8IU57 520 aaPredicted RBP14.29□□□□□ -0.12
SUPT16H-202ENST00000552829 TRIB2Q92519 343 aa14.29□□□□□ -0.12
SUPT16H-202ENST00000552829 BICC1Q9H694 974 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms