RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 SLC45A1Q9Y2W3 748 aa14.7□□□□□ -0.06
CKAP4-202ENST00000552828 AFG3L2Q9Y4W6 797 aa14.7□□□□□ -0.06
CKAP4-202ENST00000552828 RANBP2P49792 3224 aaKnown RBP14.7□□□□□ -0.06
CKAP4-202ENST00000552828 GRK4P32298 578 aa14.69□□□□□ -0.06
CKAP4-202ENST00000552828 FXR1P51114 621 aaKnown RBP eCLIP14.69□□□□□ -0.06
CKAP4-202ENST00000552828 RASGRF1Q13972 1273 aa14.69□□□□□ -0.06
CKAP4-202ENST00000552828 FASTKD5Q7L8L6 764 aaKnown RBP14.69□□□□□ -0.06
CKAP4-202ENST00000552828 SLF2Q8IX21 1173 aa14.69□□□□□ -0.06
CKAP4-202ENST00000552828 NKX2-3Q8TAU0 364 aa14.69□□□□□ -0.06
CKAP4-202ENST00000552828 ARHGAP45Q92619 1136 aa14.69□□□□□ -0.06
CKAP4-202ENST00000552828 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
CKAP4-202ENST00000552828 PICK1Q9NRD5 415 aa14.69□□□□□ -0.06
CKAP4-202ENST00000552828 COLQQ9Y215 455 aaPredicted RBP14.69□□□□□ -0.06
CKAP4-202ENST00000552828 ZHX2Q9Y6X8 837 aa14.69□□□□□ -0.06
CKAP4-202ENST00000552828 ZSWIM8A7E2V4 1837 aa14.69□□□□□ -0.06
CKAP4-202ENST00000552828 CTNND1O60716 968 aaKnown RBP14.68□□□□□ -0.06
CKAP4-202ENST00000552828 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
CKAP4-202ENST00000552828 CYP2C8P10632 490 aa14.68□□□□□ -0.06
CKAP4-202ENST00000552828 TIMM10P62072 90 aa14.68□□□□□ -0.06
CKAP4-202ENST00000552828 MTX1Q13505 466 aa14.68□□□□□ -0.06
CKAP4-202ENST00000552828 SPTY2D1Q68D10 685 aaPredicted RBP14.68□□□□□ -0.06
CKAP4-202ENST00000552828 UBE2Q1Q7Z7E8 422 aa14.68□□□□□ -0.06
CKAP4-202ENST00000552828 RAET1EQ8TD07 263 aa14.68□□□□□ -0.06
CKAP4-202ENST00000552828 MEIS3Q99687 375 aa14.68□□□□□ -0.06
CKAP4-202ENST00000552828 MYPNQ86TC9 1320 aa14.67□□□□□ -0.06
CKAP4-202ENST00000552828 GPR75-ASB3A0A0A6YYF3 556 aa14.67□□□□□ -0.06
CKAP4-202ENST00000552828 DDTLA6NHG4 134 aaPredicted RBP14.67□□□□□ -0.06
CKAP4-202ENST00000552828 H0YGN5 161 aa14.67□□□□□ -0.06
CKAP4-202ENST00000552828 GJB1P08034 283 aa14.67□□□□□ -0.06
CKAP4-202ENST00000552828 GJA8P48165 433 aa14.67□□□□□ -0.06
CKAP4-202ENST00000552828 FCGRTP55899 365 aa14.67□□□□□ -0.06
CKAP4-202ENST00000552828 DZIP1Q86YF9 867 aaKnown RBP14.67□□□□□ -0.06
CKAP4-202ENST00000552828 DDX4Q9NQI0 724 aaKnown RBP14.67□□□□□ -0.06
CKAP4-202ENST00000552828 AKAP2Q9Y2D5 859 aa14.67□□□□□ -0.06
CKAP4-202ENST00000552828 A0A1B0GUL7 405 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 TBC1D12O60347 775 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 MAP4K4O95819 1239 aaPredicted RBP14.66□□□□□ -0.06
CKAP4-202ENST00000552828 CCL5P13501 91 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 RARSP54136 660 aaKnown RBP14.66□□□□□ -0.06
CKAP4-202ENST00000552828 RHBDL3P58872 404 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 PRKCZQ05513 592 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 ZNF384Q8TF68 577 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 XAGE2Q96GT9 111 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 ABCF2Q9UG63 623 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 SZT2Q5T011 3432 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 MYH13Q9UKX3 1938 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 MROH7-TTC4A0A0A0MT08 1334 aa14.66□□□□□ -0.06
CKAP4-202ENST00000552828 SRGAP3O43295 1099 aa14.65□□□□□ -0.06
CKAP4-202ENST00000552828 ECM2O94769 699 aaPredicted RBP14.65□□□□□ -0.06
CKAP4-202ENST00000552828 GNAI3P08754 354 aa14.65□□□□□ -0.06
CKAP4-202ENST00000552828 BTDP43251 543 aa14.65□□□□□ -0.06
CKAP4-202ENST00000552828 MECOMQ03112 1051 aa14.65□□□□□ -0.06
CKAP4-202ENST00000552828 TFCP2Q12800 502 aa14.65□□□□□ -0.06
CKAP4-202ENST00000552828 MVPQ14764 893 aaKnown RBP14.65□□□□□ -0.06
CKAP4-202ENST00000552828 ZSCAN29Q8IWY8 852 aaPredicted RBP14.65□□□□□ -0.06
CKAP4-202ENST00000552828 SLAIN1Q8ND83 568 aa14.65□□□□□ -0.06
CKAP4-202ENST00000552828 SLURP2P0DP57 97 aa14.64□□□□□ -0.07
CKAP4-202ENST00000552828 CAPN2P17655 700 aa14.64□□□□□ -0.07
CKAP4-202ENST00000552828 UBXN2AP68543 259 aa14.64□□□□□ -0.07
CKAP4-202ENST00000552828 ERICH6Q7L0X2 663 aa14.64□□□□□ -0.07
CKAP4-202ENST00000552828 PXYLP1Q8TE99 480 aa14.64□□□□□ -0.07
CKAP4-202ENST00000552828 RNF208Q9H0X6 261 aa14.64□□□□□ -0.07
CKAP4-202ENST00000552828 GABRQQ9UN88 632 aa14.64□□□□□ -0.07
CKAP4-202ENST00000552828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.64□□□□□ -0.07
CKAP4-202ENST00000552828 FLT3LGP49771 235 aa14.63□□□□□ -0.07
CKAP4-202ENST00000552828 PICALMQ13492 652 aa14.63□□□□□ -0.07
CKAP4-202ENST00000552828 IRF5Q13568 498 aa14.63□□□□□ -0.07
CKAP4-202ENST00000552828 GADL1Q6ZQY3 521 aa14.63□□□□□ -0.07
CKAP4-202ENST00000552828 NSUN4Q96CB9 384 aaKnown RBP14.63□□□□□ -0.07
CKAP4-202ENST00000552828 HMG20BQ9P0W2 317 aa14.63□□□□□ -0.07
CKAP4-202ENST00000552828 AGTPBP1Q9UPW5 1226 aa14.63□□□□□ -0.07
CKAP4-202ENST00000552828 TRIOBPQ9H2D6 2365 aa14.62□□□□□ -0.07
CKAP4-202ENST00000552828 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
CKAP4-202ENST00000552828 ADCY3O60266 1144 aa14.62□□□□□ -0.07
CKAP4-202ENST00000552828 GSTO1P78417 241 aa14.62□□□□□ -0.07
CKAP4-202ENST00000552828 SPATA5Q8NB90 893 aa14.62□□□□□ -0.07
CKAP4-202ENST00000552828 PROCA1Q8NCQ7 364 aaPredicted RBP14.62□□□□□ -0.07
CKAP4-202ENST00000552828 U2AF1L4Q8WU68 220 aaKnown RBP14.62□□□□□ -0.07
CKAP4-202ENST00000552828 BIN2Q9UBW5 565 aaPredicted RBP14.62□□□□□ -0.07
CKAP4-202ENST00000552828 COL2A1P02458 1487 aaPredicted RBP14.62□□□□□ -0.07
CKAP4-202ENST00000552828 MYH2Q9UKX2 1941 aa14.61□□□□□ -0.07
CKAP4-202ENST00000552828 SGPL1O95470 568 aa14.61□□□□□ -0.07
CKAP4-202ENST00000552828 LDHCP07864 332 aa14.61□□□□□ -0.07
CKAP4-202ENST00000552828 ARID4AP29374 1257 aaPredicted RBP14.61□□□□□ -0.07
CKAP4-202ENST00000552828 SMCR8Q8TEV9 937 aaPredicted RBP14.61□□□□□ -0.07
CKAP4-202ENST00000552828 DPF3Q92784 378 aa14.61□□□□□ -0.07
CKAP4-202ENST00000552828 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
CKAP4-202ENST00000552828 HTATIP2Q9BUP3 242 aa14.61□□□□□ -0.07
CKAP4-202ENST00000552828 TBC1D2Q9BYX2 928 aa14.61□□□□□ -0.07
CKAP4-202ENST00000552828 OSBPL5Q9H0X9 879 aaPredicted RBP14.61□□□□□ -0.07
CKAP4-202ENST00000552828 UNC93B1Q9H1C4 597 aa14.61□□□□□ -0.07
CKAP4-202ENST00000552828 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.61□□□□□ -0.07
CKAP4-202ENST00000552828 DOCK2Q92608 1830 aa14.61□□□□□ -0.07
CKAP4-202ENST00000552828 TNPO2O14787 897 aaKnown RBP14.6□□□□□ -0.07
CKAP4-202ENST00000552828 TREML2Q5T2D2 321 aa14.6□□□□□ -0.07
CKAP4-202ENST00000552828 PI16Q6UXB8 463 aa14.6□□□□□ -0.07
CKAP4-202ENST00000552828 TBC1D9Q6ZT07 1266 aa14.6□□□□□ -0.07
CKAP4-202ENST00000552828 PRO3102Q9H379 93 aa14.6□□□□□ -0.07
CKAP4-202ENST00000552828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.6□□□□□ -0.07
CKAP4-202ENST00000552828 PNMA3Q9UL41 463 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms