RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 CLEC4MQ9H2X3 399 aaPredicted RBP6.81□□□□□ -1.32
HCFC2-206ENST00000552343 A0A096LPE4 126 aa6.8□□□□□ -1.32
HCFC2-206ENST00000552343 A0A1W2PPZ6 126 aa6.8□□□□□ -1.32
HCFC2-206ENST00000552343 ZNF865P0CJ78 1059 aaPredicted RBP6.8□□□□□ -1.32
HCFC2-206ENST00000552343 ZNF16P17020 682 aaPredicted RBP6.8□□□□□ -1.32
HCFC2-206ENST00000552343 FMR1Q06787 632 aaKnown RBP eCLIP6.8□□□□□ -1.32
HCFC2-206ENST00000552343 PI4K2BQ8TCG2 481 aa6.8□□□□□ -1.32
HCFC2-206ENST00000552343 FBF1Q8TES7 1133 aa6.8□□□□□ -1.32
HCFC2-206ENST00000552343 FAM84AQ96KN4 292 aa6.8□□□□□ -1.32
HCFC2-206ENST00000552343 DNAJC25Q9H1X3 360 aa6.8□□□□□ -1.32
HCFC2-206ENST00000552343 PRPF40AO75400 957 aaKnown RBP6.79□□□□□ -1.32
HCFC2-206ENST00000552343 SPRED3Q2MJR0 410 aa6.79□□□□□ -1.32
HCFC2-206ENST00000552343 CILP2Q8IUL8 1156 aa6.79□□□□□ -1.32
HCFC2-206ENST00000552343 FRMD6Q96NE9 622 aa6.79□□□□□ -1.32
HCFC2-206ENST00000552343 TRIM56Q9BRZ2 755 aaKnown RBP6.79□□□□□ -1.32
HCFC2-206ENST00000552343 ZFYVE1Q9HBF4 777 aa6.79□□□□□ -1.32
HCFC2-206ENST00000552343 MRS2Q9HD23 443 aa6.79□□□□□ -1.32
HCFC2-206ENST00000552343 VAV3Q9UKW4 847 aa6.79□□□□□ -1.32
HCFC2-206ENST00000552343 AOC2O75106 756 aa6.78□□□□□ -1.32
HCFC2-206ENST00000552343 LDHBP07195 334 aaKnown RBP6.78□□□□□ -1.32
HCFC2-206ENST00000552343 GRIA4P48058 902 aa6.78□□□□□ -1.32
HCFC2-206ENST00000552343 PRKCQQ04759 706 aa6.78□□□□□ -1.32
HCFC2-206ENST00000552343 CDK5R2Q13319 367 aa6.78□□□□□ -1.32
HCFC2-206ENST00000552343 CORO1BQ9BR76 489 aa6.78□□□□□ -1.32
HCFC2-206ENST00000552343 U3KQE9 123 aa6.78□□□□□ -1.32
HCFC2-206ENST00000552343 CPNE3O75131 537 aaKnown RBP6.77□□□□□ -1.33
HCFC2-206ENST00000552343 POLR3DP05423 398 aaPredicted RBP6.77□□□□□ -1.33
HCFC2-206ENST00000552343 FAM87AP0C7U9 286 aa6.77□□□□□ -1.33
HCFC2-206ENST00000552343 DSC3Q14574 896 aa6.77□□□□□ -1.33
HCFC2-206ENST00000552343 FBXO33Q7Z6M2 555 aa6.77□□□□□ -1.33
HCFC2-206ENST00000552343 CCNJLQ8IV13 435 aa6.77□□□□□ -1.33
HCFC2-206ENST00000552343 BHLHE22Q8NFJ8 381 aaPredicted RBP6.77□□□□□ -1.33
HCFC2-206ENST00000552343 WDR18Q9BV38 432 aa6.77□□□□□ -1.33
HCFC2-206ENST00000552343 NIF3L1Q9GZT8 377 aa6.77□□□□□ -1.33
HCFC2-206ENST00000552343 ZFYVE28Q9HCC9 887 aa6.77□□□□□ -1.33
HCFC2-206ENST00000552343 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.77□□□□□ -1.33
HCFC2-206ENST00000552343 PPP1R9AQ9ULJ8 1098 aa6.77□□□□□ -1.33
HCFC2-206ENST00000552343 LRRC10BA6NIK2 292 aa6.76□□□□□ -1.33
HCFC2-206ENST00000552343 GPR182O15218 404 aa6.76□□□□□ -1.33
HCFC2-206ENST00000552343 P4HBP07237 508 aaKnown RBP6.76□□□□□ -1.33
HCFC2-206ENST00000552343 VAMP1P23763 118 aa6.76□□□□□ -1.33
HCFC2-206ENST00000552343 MRRFQ96E11 262 aaKnown RBP6.76□□□□□ -1.33
HCFC2-206ENST00000552343 CSRNP1Q96S65 589 aa6.76□□□□□ -1.33
HCFC2-206ENST00000552343 TCF12Q99081 682 aa6.76□□□□□ -1.33
HCFC2-206ENST00000552343 PNMA6FA0A0J9YX94 578 aa6.75□□□□□ -1.33
HCFC2-206ENST00000552343 A0A1W2PP55 124 aa6.75□□□□□ -1.33
HCFC2-206ENST00000552343 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
HCFC2-206ENST00000552343 ENOX2Q16206 610 aaKnown RBP6.75□□□□□ -1.33
HCFC2-206ENST00000552343 AOC3Q16853 763 aa6.75□□□□□ -1.33
HCFC2-206ENST00000552343 LIN7BQ9HAP6 207 aa6.75□□□□□ -1.33
HCFC2-206ENST00000552343 NLRP2Q9NX02 1062 aa6.75□□□□□ -1.33
HCFC2-206ENST00000552343 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
HCFC2-206ENST00000552343 GIPC1O14908 333 aa6.74□□□□□ -1.33
HCFC2-206ENST00000552343 B3GALT4O96024 378 aa6.74□□□□□ -1.33
HCFC2-206ENST00000552343 CFPP27918 469 aa6.74□□□□□ -1.33
HCFC2-206ENST00000552343 PSMD2Q13200 908 aa6.74□□□□□ -1.33
HCFC2-206ENST00000552343 IFI16Q16666 785 aaKnown RBP6.74□□□□□ -1.33
HCFC2-206ENST00000552343 FLAD1Q8NFF5 587 aa6.74□□□□□ -1.33
HCFC2-206ENST00000552343 DDX54Q8TDD1 881 aaKnown RBP6.74□□□□□ -1.33
HCFC2-206ENST00000552343 HRASLS5Q96KN8 279 aa6.74□□□□□ -1.33
HCFC2-206ENST00000552343 TOX2Q96NM4 488 aa6.74□□□□□ -1.33
HCFC2-206ENST00000552343 SYNGAP1Q96PV0 1343 aa6.74□□□□□ -1.33
HCFC2-206ENST00000552343 ZNF503-AS2A6NEH8 195 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 EIF1AYO14602 144 aaKnown RBP6.73□□□□□ -1.33
HCFC2-206ENST00000552343 TMPRSS2O15393 492 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 RAP1GAPP47736 663 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 MLANAQ16655 118 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 SLC23A3Q6PIS1 610 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 ZSWIM9Q86XI8 627 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 C1QL4Q86Z23 238 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 PPP4R2Q9NY27 417 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 CRIM1Q9NZV1 1036 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 PLAGL2Q9UPG8 496 aa6.73□□□□□ -1.33
HCFC2-206ENST00000552343 SORBS3O60504 671 aa6.72□□□□□ -1.33
HCFC2-206ENST00000552343 LEFTY1O75610 366 aa6.72□□□□□ -1.33
HCFC2-206ENST00000552343 OXCT1P55809 520 aa6.72□□□□□ -1.33
HCFC2-206ENST00000552343 ANGEL2Q5VTE6 544 aaKnown RBP6.72□□□□□ -1.33
HCFC2-206ENST00000552343 LILRA6Q6PI73 481 aa6.72□□□□□ -1.33
HCFC2-206ENST00000552343 LCNL1Q6ZST4 164 aa6.72□□□□□ -1.33
HCFC2-206ENST00000552343 GALNT12Q8IXK2 581 aa6.72□□□□□ -1.33
HCFC2-206ENST00000552343 PIDD1Q9HB75 910 aa6.72□□□□□ -1.33
HCFC2-206ENST00000552343 MKNK2Q9HBH9 465 aa6.72□□□□□ -1.33
HCFC2-206ENST00000552343 FAM53CQ9NYF3 392 aa6.72□□□□□ -1.33
HCFC2-206ENST00000552343 TMEM265A0A087WTH1 108 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 CEACAM5P06731 702 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 LIG1P18858 919 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 GNA15P30679 374 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 KCNMB1Q16558 191 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 ARHGAP27Q6ZUM4 889 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 ZNF428Q96B54 188 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 WDR89Q96FK6 387 aaPredicted RBP6.71□□□□□ -1.34
HCFC2-206ENST00000552343 FANCD2OSQ96PS1 177 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 SRCIN1Q9C0H9 1055 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 ZNF576Q9H609 170 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 PRDM7Q9NQW5 492 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 PARP2Q9UGN5 583 aa6.71□□□□□ -1.34
HCFC2-206ENST00000552343 IGHA2P01877 340 aa6.7□□□□□ -1.34
HCFC2-206ENST00000552343 TMC4Q7Z404 712 aa6.7□□□□□ -1.34
HCFC2-206ENST00000552343 LRRC56Q8IYG6 542 aaPredicted RBP6.7□□□□□ -1.34
HCFC2-206ENST00000552343 DUSP9Q99956 384 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms