RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ZNF333Q96JL9 665 aa7□□□□□ -1.29
HOXB3-213ENST00000552000 PLEKHF1Q96S99 279 aa7□□□□□ -1.29
HOXB3-213ENST00000552000 CHPF2Q9P2E5 772 aa7□□□□□ -1.29
HOXB3-213ENST00000552000 MAPK8IP3Q9UPT6 1336 aa7□□□□□ -1.29
HOXB3-213ENST00000552000 LAMA2P24043 3122 aaKnown RBP6.99□□□□□ -1.29
HOXB3-213ENST00000552000 WTIPA6NIX2 430 aaPredicted RBP6.99□□□□□ -1.29
HOXB3-213ENST00000552000 ZBTB48P10074 688 aaPredicted RBP6.99□□□□□ -1.29
HOXB3-213ENST00000552000 ATP2B4P23634 1241 aa6.99□□□□□ -1.29
HOXB3-213ENST00000552000 SLC9C1Q4G0N8 1177 aa6.99□□□□□ -1.29
HOXB3-213ENST00000552000 CCDC152Q4G0S7 254 aa6.99□□□□□ -1.29
HOXB3-213ENST00000552000 MSS51Q4VC12 460 aa6.99□□□□□ -1.29
HOXB3-213ENST00000552000 OTUD7BQ6GQQ9 843 aa6.99□□□□□ -1.29
HOXB3-213ENST00000552000 JARID2Q92833 1246 aaPredicted RBP6.99□□□□□ -1.29
HOXB3-213ENST00000552000 IRF7Q92985 503 aa6.99□□□□□ -1.29
HOXB3-213ENST00000552000 SALL2Q9Y467 1007 aaPredicted RBP6.99□□□□□ -1.29
HOXB3-213ENST00000552000 PTCH2Q9Y6C5 1203 aa6.99□□□□□ -1.29
HOXB3-213ENST00000552000 ZNF646O15015 1829 aaPredicted RBP6.99□□□□□ -1.29
HOXB3-213ENST00000552000 SPEF2Q9C093 1822 aa6.99□□□□□ -1.29
HOXB3-213ENST00000552000 GJA5P36382 358 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 RIPK4P57078 832 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 TRIM28Q13263 835 aaKnown RBP6.98□□□□□ -1.29
HOXB3-213ENST00000552000 HDGFL1Q5TGJ6 251 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 STRIP1Q5VSL9 837 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 NBPF11Q86T75 865 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 ANKRD18AQ8IVF6 992 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 HPS1Q92902 700 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 ZBED3Q96IU2 234 aaPredicted RBP6.98□□□□□ -1.29
HOXB3-213ENST00000552000 DEFB129Q9H1M3 183 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 NXF1Q9UBU9 619 aaKnown RBP6.98□□□□□ -1.29
HOXB3-213ENST00000552000 MYO3BQ8WXR4 1341 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 DOCK3Q8IZD9 2030 aa6.98□□□□□ -1.29
HOXB3-213ENST00000552000 PRUNE2Q8WUY3 3088 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 MED23Q9ULK4 1368 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 SSC5DA1L4H1 1573 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 PPP1R12BO60237 982 aaPredicted RBP6.97□□□□□ -1.29
HOXB3-213ENST00000552000 HSP90B1P14625 803 aaKnown RBP6.97□□□□□ -1.29
HOXB3-213ENST00000552000 GMPRP36959 345 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 MAP3K11Q16584 847 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 BRICD5Q6PL45 260 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 KIAA0825Q8IV33 1275 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 ZBTB38Q8NAP3 1195 aaPredicted RBP6.97□□□□□ -1.29
HOXB3-213ENST00000552000 SH3TC2Q8TF17 1288 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 DPF3Q92784 378 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 PTPN18Q99952 460 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 BABAM1Q9NWV8 329 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 MYH3P11055 1940 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 LAMB1P07942 1786 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 ZSWIM8A7E2V4 1837 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 ECM29Q5VYK3 1845 aa6.97□□□□□ -1.29
HOXB3-213ENST00000552000 PDE8AO60658 829 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
HOXB3-213ENST00000552000 CCT4P50991 539 aaKnown RBP6.96□□□□□ -1.3
HOXB3-213ENST00000552000 HIC1Q14526 733 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 ARHGEF6Q15052 776 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 DLGAP5Q15398 846 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 TAF1CQ15572 869 aaPredicted RBP6.96□□□□□ -1.3
HOXB3-213ENST00000552000 TTLL5Q6EMB2 1281 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 RIC3Q7Z5B4 369 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 TXNRD3Q86VQ6 643 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 MYD88Q99836 296 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 COA1Q9GZY4 146 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 PNNQ9H307 717 aaKnown RBP6.96□□□□□ -1.3
HOXB3-213ENST00000552000 ELP3Q9H9T3 547 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 HYPKQ9NX55 129 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 DBF4Q9UBU7 674 aaPredicted RBP6.96□□□□□ -1.3
HOXB3-213ENST00000552000 MINPP1Q9UNW1 487 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 LAS1LQ9Y4W2 734 aaKnown RBP6.96□□□□□ -1.3
HOXB3-213ENST00000552000 PCDHAC2Q9Y5I4 1007 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 OTOFQ9HC10 1997 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 VCANP13611 3396 aa6.96□□□□□ -1.3
HOXB3-213ENST00000552000 COL1A1P02452 1464 aaPredicted RBP6.96□□□□□ -1.3
HOXB3-213ENST00000552000 CLRN2A0PK11 232 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 TESPA1A2RU30 521 aaPredicted RBP6.95□□□□□ -1.3
HOXB3-213ENST00000552000 CHL1O00533 1208 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 USP2O75604 605 aaPredicted RBP6.95□□□□□ -1.3
HOXB3-213ENST00000552000 PCCAP05165 728 aaPredicted RBP6.95□□□□□ -1.3
HOXB3-213ENST00000552000 KLRK1P26718 216 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 MMP14P50281 582 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 GTF2IP78347 998 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 SUZ12Q15022 739 aaKnown RBP6.95□□□□□ -1.3
HOXB3-213ENST00000552000 Q3C1V9 767 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 SUPT20HL1Q3ZLR7 823 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 NBPF12Q5TAG4 269 aaPredicted RBP6.95□□□□□ -1.3
HOXB3-213ENST00000552000 RNF19BQ6ZMZ0 732 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 NPAS3Q8IXF0 933 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 CCER1Q8TC90 406 aaPredicted RBP6.95□□□□□ -1.3
HOXB3-213ENST00000552000 KCNV2Q8TDN2 545 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 BRI3BPQ8WY22 251 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 SHISA4Q96DD7 197 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 CDC5LQ99459 802 aaKnown RBP6.95□□□□□ -1.3
HOXB3-213ENST00000552000 ARHGAP39Q9C0H5 1083 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 VEZTQ9HBM0 779 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 ZFYVE28Q9HCC9 887 aa6.95□□□□□ -1.3
HOXB3-213ENST00000552000 CCL15-CCL14A0A0B4J2E2 113 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 UNCXA6NJT0 531 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 F8W031 263 aaPredicted RBP6.94□□□□□ -1.3
HOXB3-213ENST00000552000 SOX1O00570 391 aaPredicted RBP6.94□□□□□ -1.3
HOXB3-213ENST00000552000 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
HOXB3-213ENST00000552000 TMPOP42166 694 aaKnown RBP6.94□□□□□ -1.3
HOXB3-213ENST00000552000 GCGRP47871 477 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms