RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 TTC6Q86TZ1 520 aa9.07□□□□□ -0.96
USP44-206ENST00000551837 FAM83AQ86UY5 434 aa9.07□□□□□ -0.96
USP44-206ENST00000551837 METTL16Q86W50 562 aaKnown RBP9.07□□□□□ -0.96
USP44-206ENST00000551837 FBXL16Q8N461 479 aa9.07□□□□□ -0.96
USP44-206ENST00000551837 SH3RF3Q8TEJ3 882 aaPredicted RBP9.07□□□□□ -0.96
USP44-206ENST00000551837 FAM151AQ8WW52 585 aa9.07□□□□□ -0.96
USP44-206ENST00000551837 MTA3Q9BTC8 594 aa9.07□□□□□ -0.96
USP44-206ENST00000551837 ALDH8A1Q9H2A2 487 aaPredicted RBP9.07□□□□□ -0.96
USP44-206ENST00000551837 ADARB2Q9NS39 739 aaKnown RBP9.07□□□□□ -0.96
USP44-206ENST00000551837 ARPP21Q9UBL0 812 aaPredicted RBP9.07□□□□□ -0.96
USP44-206ENST00000551837 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
USP44-206ENST00000551837 ZNF541Q9H0D2 1346 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 CACNA1SQ13698 1873 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 DOCK2Q92608 1830 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 USP17L12C9JPN9 530 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 USP17L21D6R901 530 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 SLC27A2O14975 620 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 HMGB1P09429 215 aaKnown RBP9.06□□□□□ -0.96
USP44-206ENST00000551837 PSMA5P28066 241 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 USP5P45974 858 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 RBM5P52756 815 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP44-206ENST00000551837 SPDYE2Q495Y8 402 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 USP50Q70EL3 339 aaPredicted RBP9.06□□□□□ -0.96
USP44-206ENST00000551837 MICALL2Q8IY33 904 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 TEX11Q8IYF3 940 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 TGFBRAP1Q8WUH2 860 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 KIF2CQ99661 725 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 NAPBQ9H115 298 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 TDRD3Q9H7E2 651 aaKnown RBP9.06□□□□□ -0.96
USP44-206ENST00000551837 ZNF70Q9UC06 446 aaPredicted RBP9.06□□□□□ -0.96
USP44-206ENST00000551837 SNX14Q9Y5W7 946 aa9.06□□□□□ -0.96
USP44-206ENST00000551837 CHD4Q14839 1912 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 IQCA1LA6NCM1 817 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 POTECB2RU33 542 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 TBC1D12O60347 775 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 SLC3A2P08195 630 aaKnown RBP9.05□□□□□ -0.96
USP44-206ENST00000551837 EPS15P42566 896 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 PNMA8AQ86V59 439 aaPredicted RBP9.05□□□□□ -0.96
USP44-206ENST00000551837 AMOTL1Q8IY63 956 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 RASEFQ8IZ41 740 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 SDR42E1Q8WUS8 393 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 EHD4Q9H223 541 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 RNF41Q9H4P4 317 aaPredicted RBP9.05□□□□□ -0.96
USP44-206ENST00000551837 ZNF287Q9HBT7 754 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 ZSWIM6Q9HCJ5 1215 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 EPB41L4AQ9HCS5 686 aaPredicted RBP9.05□□□□□ -0.96
USP44-206ENST00000551837 MCM9Q9NXL9 1143 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 PI4KBQ9UBF8 816 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 FAM198AQ9UFP1 575 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 CLEC11AQ9Y240 323 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 PITPNM2Q9BZ72 1349 aa9.05□□□□□ -0.96
USP44-206ENST00000551837 LMOD1P29536 600 aaPredicted RBP9.04□□□□□ -0.96
USP44-206ENST00000551837 TDO2P48775 406 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 TNNI2P48788 182 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 GABPAQ06546 454 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 PPARAQ07869 468 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 TNFAIP1Q13829 316 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 NBPF9Q3BBW0 867 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 AKNAD1Q5T1N1 836 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 STAG1Q8WVM7 1258 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 OSBPL5Q9H0X9 879 aaPredicted RBP9.04□□□□□ -0.96
USP44-206ENST00000551837 CNNM2Q9H8M5 875 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 TSHZ2Q9NRE2 1034 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 TMOD2Q9NZR1 351 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 HACL1Q9UJ83 578 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 PPP2R3BQ9Y5P8 575 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 FLT1P17948 1338 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 WDR19Q8NEZ3 1342 aa9.04□□□□□ -0.96
USP44-206ENST00000551837 COL2A1P02458 1487 aaPredicted RBP9.03□□□□□ -0.96
USP44-206ENST00000551837 ATRNL1Q5VV63 1379 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 E7EWF7 191 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 ORC4O43929 436 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 POLR3DP05423 398 aaPredicted RBP9.03□□□□□ -0.96
USP44-206ENST00000551837 VEGFAP15692 232 aaPredicted RBP9.03□□□□□ -0.96
USP44-206ENST00000551837 PLCD1P51178 756 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 HIRAP54198 1017 aaPredicted RBP9.03□□□□□ -0.96
USP44-206ENST00000551837 EXOSC10Q01780 885 aaKnown RBP9.03□□□□□ -0.96
USP44-206ENST00000551837 RABEP1Q15276 862 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 KIF4BQ2VIQ3 1234 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 TATDN1Q6P1N9 297 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 MFSD6Q6ZSS7 791 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 RUFY3Q7L099 469 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 DHX32Q7L7V1 743 aaKnown RBP9.03□□□□□ -0.96
USP44-206ENST00000551837 SAMD7Q7Z3H4 446 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 MAPKAPK5Q8IW41 473 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 TMTC2Q8N394 836 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 NCOA7Q8NI08 942 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 HOOK2Q96ED9 719 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 NEK1Q96PY6 1258 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 KRT23Q9C075 422 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 DDX4Q9NQI0 724 aaKnown RBP9.03□□□□□ -0.96
USP44-206ENST00000551837 SWAP70Q9UH65 585 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 PALD1Q9ULE6 856 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 PCDHAC2Q9Y5I4 1007 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 PSME4Q14997 1843 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 SCN9AQ15858 1988 aa9.03□□□□□ -0.96
USP44-206ENST00000551837 SBF1O95248 1867 aa9.02□□□□□ -0.96
USP44-206ENST00000551837 MINDY4BA8MYZ0 360 aa9.02□□□□□ -0.97
USP44-206ENST00000551837 EGFRP00533 1210 aa9.02□□□□□ -0.97
USP44-206ENST00000551837 EPHX2P34913 555 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms