RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 COL2A1P02458 1487 aaPredicted RBP15.08■□□□□ 0
PTCH1-222ENST00000551425 NFIAQ12857 509 aa15.07■□□□□ 0
PTCH1-222ENST00000551425 FAM110CQ1W6H9 321 aa15.07■□□□□ 0
PTCH1-222ENST00000551425 CDC42EP5Q6NZY7 148 aa15.07■□□□□ 0
PTCH1-222ENST00000551425 ANKRD13CQ8N6S4 541 aa15.07■□□□□ 0
PTCH1-222ENST00000551425 FAM198AQ9UFP1 575 aa15.07■□□□□ 0
PTCH1-222ENST00000551425 DAGLAQ9Y4D2 1042 aa15.07■□□□□ 0
PTCH1-222ENST00000551425 SPTBN5Q9NRC6 3674 aaKnown RBP15.06■□□□□ 0
PTCH1-222ENST00000551425 F6X3S4 739 aa15.06■□□□□ 0
PTCH1-222ENST00000551425 VGLL2Q8N8G2 317 aa15.06■□□□□ 0
PTCH1-222ENST00000551425 AGTPBP1Q9UPW5 1226 aa15.06■□□□□ 0
PTCH1-222ENST00000551425 PFASO15067 1338 aa15.06■□□□□ 0
PTCH1-222ENST00000551425 KIF16BQ96L93 1317 aa15.06■□□□□ 0
PTCH1-222ENST00000551425 VCANP13611 3396 aa15.06■□□□□ 0
PTCH1-222ENST00000551425 PDE8BO95263 885 aa15.05■□□□□ -0
PTCH1-222ENST00000551425 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
PTCH1-222ENST00000551425 GJD2Q9UKL4 321 aa15.05■□□□□ -0
PTCH1-222ENST00000551425 DDX60LQ5H9U9 1706 aaKnown RBP15.05■□□□□ -0
PTCH1-222ENST00000551425 LAMA2P24043 3122 aaKnown RBP15.04■□□□□ -0
PTCH1-222ENST00000551425 COL6A1P12109 1028 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 MAP3K10Q02779 954 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 TRIM32Q13049 653 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 CCDC27Q2M243 656 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 METTL24Q5JXM2 366 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 MAP3K21Q5TCX8 1036 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 ZFPM1Q8IX07 1006 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 WDR66Q8TBY9 1149 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 KAZALD1Q96I82 304 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 PNMA3Q9UL41 463 aa15.04■□□□□ -0
PTCH1-222ENST00000551425 IL16Q14005 1332 aa15.03■□□□□ -0
PTCH1-222ENST00000551425 CTNND1O60716 968 aaKnown RBP15.03■□□□□ -0
PTCH1-222ENST00000551425 ALDH1L1O75891 902 aa15.03■□□□□ -0
PTCH1-222ENST00000551425 GCLCP48506 637 aaPredicted RBP15.03■□□□□ -0
PTCH1-222ENST00000551425 DIXDC1Q155Q3 683 aa15.03■□□□□ -0
PTCH1-222ENST00000551425 LRRC24Q50LG9 513 aa15.03■□□□□ -0
PTCH1-222ENST00000551425 SUCLG2Q96I99 432 aa15.03■□□□□ -0
PTCH1-222ENST00000551425 USP40Q9NVE5 1235 aa15.03■□□□□ -0
PTCH1-222ENST00000551425 TRIM75PA6NK02 468 aa15.02■□□□□ -0
PTCH1-222ENST00000551425 VAMP4O75379 141 aa15.02■□□□□ -0
PTCH1-222ENST00000551425 MDM2Q00987 491 aaPredicted RBP15.02■□□□□ -0
PTCH1-222ENST00000551425 TREML2Q5T2D2 321 aa15.02■□□□□ -0
PTCH1-222ENST00000551425 WWC1Q8IX03 1113 aa15.02■□□□□ -0
PTCH1-222ENST00000551425 FAM161BQ96MY7 647 aa15.02■□□□□ -0
PTCH1-222ENST00000551425 ENTPD3O75355 529 aa15.01□□□□□ -0.01
PTCH1-222ENST00000551425 IFIT1P09914 478 aaKnown RBP15.01□□□□□ -0.01
PTCH1-222ENST00000551425 FGFR2P21802 821 aa15.01□□□□□ -0.01
PTCH1-222ENST00000551425 LRRC26Q2I0M4 334 aa15.01□□□□□ -0.01
PTCH1-222ENST00000551425 RABL6Q3YEC7 729 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-222ENST00000551425 ZNF697Q5TEC3 545 aa15.01□□□□□ -0.01
PTCH1-222ENST00000551425 PROCA1Q8NCQ7 364 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-222ENST00000551425 TRIB2Q92519 343 aa15.01□□□□□ -0.01
PTCH1-222ENST00000551425 IDI2Q9BXS1 227 aa15.01□□□□□ -0.01
PTCH1-222ENST00000551425 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-222ENST00000551425 LRRFIP2Q9Y608 721 aaKnown RBP15.01□□□□□ -0.01
PTCH1-222ENST00000551425 DOCK3Q8IZD9 2030 aa15□□□□□ -0.01
PTCH1-222ENST00000551425 CACNA1FO60840 1977 aa15□□□□□ -0.01
PTCH1-222ENST00000551425 PRDX5P30044 214 aa15□□□□□ -0.01
PTCH1-222ENST00000551425 PUM3Q15397 648 aaKnown RBP15□□□□□ -0.01
PTCH1-222ENST00000551425 SH3BP5LQ7L8J4 393 aa15□□□□□ -0.01
PTCH1-222ENST00000551425 MAFAQ8NHW3 353 aaPredicted RBP15□□□□□ -0.01
PTCH1-222ENST00000551425 CDX2Q99626 313 aaPredicted RBP15□□□□□ -0.01
PTCH1-222ENST00000551425 EYSQ5T1H1 3165 aa15□□□□□ -0.01
PTCH1-222ENST00000551425 PTPRFP10586 1907 aa15□□□□□ -0.01
PTCH1-222ENST00000551425 UTYO14607 1347 aa14.99□□□□□ -0.01
PTCH1-222ENST00000551425 XRCC5P13010 732 aaKnown RBP14.99□□□□□ -0.01
PTCH1-222ENST00000551425 PRKAR2AP13861 404 aaKnown RBP14.99□□□□□ -0.01
PTCH1-222ENST00000551425 ZEB1P37275 1124 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-222ENST00000551425 RGS3P49796 1198 aa14.99□□□□□ -0.01
PTCH1-222ENST00000551425 SYMPKQ92797 1274 aaKnown RBP14.99□□□□□ -0.01
PTCH1-222ENST00000551425 SRCIN1Q9C0H9 1055 aa14.99□□□□□ -0.01
PTCH1-222ENST00000551425 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
PTCH1-222ENST00000551425 FANCIQ9NVI1 1328 aa14.98□□□□□ -0.01
PTCH1-222ENST00000551425 AK9Q5TCS8 1911 aa14.98□□□□□ -0.01
PTCH1-222ENST00000551425 PRUNE2Q8WUY3 3088 aa14.98□□□□□ -0.01
PTCH1-222ENST00000551425 TTC28Q96AY4 2481 aa14.98□□□□□ -0.01
PTCH1-222ENST00000551425 LDHBP07195 334 aaKnown RBP14.98□□□□□ -0.01
PTCH1-222ENST00000551425 NBPF7P0C2Y1 421 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-222ENST00000551425 DDX10Q13206 875 aaKnown RBP14.98□□□□□ -0.01
PTCH1-222ENST00000551425 PABPC4Q13310 644 aaKnown RBP eCLIP14.98□□□□□ -0.01
PTCH1-222ENST00000551425 TRMT44Q8IYL2 757 aaKnown RBP14.98□□□□□ -0.01
PTCH1-222ENST00000551425 LBHD1Q9BQE6 289 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-222ENST00000551425 BICC1Q9H694 974 aaKnown RBP14.98□□□□□ -0.01
PTCH1-222ENST00000551425 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-222ENST00000551425 MORF4L1Q9UBU8 362 aa14.98□□□□□ -0.01
PTCH1-222ENST00000551425 SALL1Q9NSC2 1324 aa14.97□□□□□ -0.01
PTCH1-222ENST00000551425 PHIPQ8WWQ0 1821 aa14.97□□□□□ -0.01
PTCH1-222ENST00000551425 DOCK2Q92608 1830 aa14.97□□□□□ -0.01
PTCH1-222ENST00000551425 DDTLA6NHG4 134 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-222ENST00000551425 LHX8Q68G74 356 aa14.97□□□□□ -0.01
PTCH1-222ENST00000551425 CCDC84Q86UT8 332 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-222ENST00000551425 ZSCAN29Q8IWY8 852 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-222ENST00000551425 ANKRD44Q8N8A2 993 aa14.97□□□□□ -0.01
PTCH1-222ENST00000551425 ASCC2Q9H1I8 757 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-222ENST00000551425 SEMA6BQ9H3T3 888 aa14.97□□□□□ -0.01
PTCH1-222ENST00000551425 DOCK1Q14185 1865 aa14.97□□□□□ -0.01
PTCH1-222ENST00000551425 TBC1D12O60347 775 aa14.96□□□□□ -0.01
PTCH1-222ENST00000551425 SLURP2P0DP57 97 aa14.96□□□□□ -0.01
PTCH1-222ENST00000551425 SLC5A1P13866 664 aa14.96□□□□□ -0.01
PTCH1-222ENST00000551425 CYP2B6P20813 491 aa14.96□□□□□ -0.01
PTCH1-222ENST00000551425 COL9A1P20849 921 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms