RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.17■■□□□ 1.3
DDX54-208ENST00000551344 CFHR5Q9BXR6 569 aa23.17■■□□□ 1.3
DDX54-208ENST00000551344 DDX4Q9NQI0 724 aaKnown RBP23.17■■□□□ 1.3
DDX54-208ENST00000551344 SPDYE5A6NIY4 337 aa23.16■■□□□ 1.3
DDX54-208ENST00000551344 MAP3K10Q02779 954 aa23.16■■□□□ 1.3
DDX54-208ENST00000551344 PICALMQ13492 652 aa23.16■■□□□ 1.3
DDX54-208ENST00000551344 OTUD7BQ6GQQ9 843 aa23.16■■□□□ 1.3
DDX54-208ENST00000551344 ZKSCAN4Q969J2 545 aaPredicted RBP23.16■■□□□ 1.3
DDX54-208ENST00000551344 SNCAIPQ9Y6H5 919 aa23.16■■□□□ 1.3
DDX54-208ENST00000551344 TBC1D8O95759 1140 aa23.15■■□□□ 1.3
DDX54-208ENST00000551344 GTF2A2P52657 109 aa23.15■■□□□ 1.3
DDX54-208ENST00000551344 NOM1Q5C9Z4 860 aaKnown RBP23.15■■□□□ 1.3
DDX54-208ENST00000551344 SH3BP5LQ7L8J4 393 aa23.15■■□□□ 1.3
DDX54-208ENST00000551344 MS4A4AQ96JQ5 239 aa23.15■■□□□ 1.3
DDX54-208ENST00000551344 LRRCC1Q9C099 1032 aa23.15■■□□□ 1.3
DDX54-208ENST00000551344 DCTPP1Q9H773 170 aa23.15■■□□□ 1.3
DDX54-208ENST00000551344 CASP8AP2Q9UKL3 1982 aa23.14■■□□□ 1.3
DDX54-208ENST00000551344 AK9Q5TCS8 1911 aa23.14■■□□□ 1.3
DDX54-208ENST00000551344 DDTLA6NHG4 134 aaPredicted RBP23.14■■□□□ 1.29
DDX54-208ENST00000551344 IDH1O75874 414 aaKnown RBP23.14■■□□□ 1.29
DDX54-208ENST00000551344 INPP5BP32019 993 aa23.14■■□□□ 1.29
DDX54-208ENST00000551344 MAP3K12Q12852 859 aa23.14■■□□□ 1.29
DDX54-208ENST00000551344 TTF1Q15361 905 aaPredicted RBP23.14■■□□□ 1.29
DDX54-208ENST00000551344 TEX11Q8IYF3 940 aa23.14■■□□□ 1.29
DDX54-208ENST00000551344 CNKSR2Q8WXI2 1034 aa23.14■■□□□ 1.29
DDX54-208ENST00000551344 AATFQ9NY61 560 aaKnown RBP eCLIP23.14■■□□□ 1.29
DDX54-208ENST00000551344 PPATQ06203 517 aa23.13■■□□□ 1.29
DDX54-208ENST00000551344 OTUD5Q96G74 571 aa23.13■■□□□ 1.29
DDX54-208ENST00000551344 ANTXR1Q9H6X2 564 aa23.13■■□□□ 1.29
DDX54-208ENST00000551344 ATRNL1Q5VV63 1379 aa23.13■■□□□ 1.29
DDX54-208ENST00000551344 IGF2BP3O00425 579 aaKnown RBP eCLIP23.12■■□□□ 1.29
DDX54-208ENST00000551344 TBC1D12O60347 775 aa23.12■■□□□ 1.29
DDX54-208ENST00000551344 CYP7A1P22680 504 aa23.12■■□□□ 1.29
DDX54-208ENST00000551344 NOL9Q5SY16 702 aaKnown RBP23.12■■□□□ 1.29
DDX54-208ENST00000551344 ADGRA1Q86SQ6 560 aa23.12■■□□□ 1.29
DDX54-208ENST00000551344 CERS3Q8IU89 383 aa23.12■■□□□ 1.29
DDX54-208ENST00000551344 SH3RF3Q8TEJ3 882 aaPredicted RBP23.12■■□□□ 1.29
DDX54-208ENST00000551344 PTPN18Q99952 460 aa23.12■■□□□ 1.29
DDX54-208ENST00000551344 NDUFB9Q9Y6M9 179 aa23.12■■□□□ 1.29
DDX54-208ENST00000551344 OTOFQ9HC10 1997 aa23.12■■□□□ 1.29
DDX54-208ENST00000551344 PHF20L1A8MW92 1017 aa23.11■■□□□ 1.29
DDX54-208ENST00000551344 GPR25O00155 361 aa23.11■■□□□ 1.29
DDX54-208ENST00000551344 PPIL2Q13356 520 aa23.11■■□□□ 1.29
DDX54-208ENST00000551344 OSBPL5Q9H0X9 879 aaPredicted RBP23.11■■□□□ 1.29
DDX54-208ENST00000551344 BCL11AQ9H165 835 aa23.11■■□□□ 1.29
DDX54-208ENST00000551344 IRF6O14896 467 aa23.1■■□□□ 1.29
DDX54-208ENST00000551344 ATP5JP18859 108 aa23.1■■□□□ 1.29
DDX54-208ENST00000551344 MAGEB6Q8N7X4 407 aa23.1■■□□□ 1.29
DDX54-208ENST00000551344 DHX36Q9H2U1 1008 aaKnown RBP23.1■■□□□ 1.29
DDX54-208ENST00000551344 PCDHB15Q9Y5E8 787 aa23.1■■□□□ 1.29
DDX54-208ENST00000551344 CCL15-CCL14A0A0B4J2E2 113 aa23.09■■□□□ 1.29
DDX54-208ENST00000551344 CETPP11597 493 aa23.09■■□□□ 1.29
DDX54-208ENST00000551344 SNAPC2Q13487 334 aa23.09■■□□□ 1.29
DDX54-208ENST00000551344 CCL15Q16663 113 aa23.09■■□□□ 1.29
DDX54-208ENST00000551344 ZNF296Q8WUU4 475 aaPredicted RBP23.09■■□□□ 1.29
DDX54-208ENST00000551344 BRI3BPQ8WY22 251 aa23.09■■□□□ 1.29
DDX54-208ENST00000551344 COL2A1P02458 1487 aaPredicted RBP23.09■■□□□ 1.29
DDX54-208ENST00000551344 CTNND1O60716 968 aaKnown RBP23.08■■□□□ 1.29
DDX54-208ENST00000551344 DGKZQ13574 1117 aa23.08■■□□□ 1.29
DDX54-208ENST00000551344 TGFBRAP1Q8WUH2 860 aa23.08■■□□□ 1.29
DDX54-208ENST00000551344 R3HDMLQ9H3Y0 253 aa23.08■■□□□ 1.29
DDX54-208ENST00000551344 LAMB1P07942 1786 aa23.07■■□□□ 1.28
DDX54-208ENST00000551344 SMARCA5O60264 1052 aaPredicted RBP23.07■■□□□ 1.28
DDX54-208ENST00000551344 SCYL3Q8IZE3 742 aa23.07■■□□□ 1.28
DDX54-208ENST00000551344 CRBNQ96SW2 442 aa23.07■■□□□ 1.28
DDX54-208ENST00000551344 DNAJC2Q99543 621 aaKnown RBP23.07■■□□□ 1.28
DDX54-208ENST00000551344 MCOLN1Q9GZU1 580 aa23.07■■□□□ 1.28
DDX54-208ENST00000551344 BOLA2Q9H3K6 86 aa23.07■■□□□ 1.28
DDX54-208ENST00000551344 PI4KBQ9UBF8 816 aa23.07■■□□□ 1.28
DDX54-208ENST00000551344 GOLIM4O00461 696 aa23.06■■□□□ 1.28
DDX54-208ENST00000551344 FKTNO75072 461 aa23.06■■□□□ 1.28
DDX54-208ENST00000551344 DYNLL1P63167 89 aaKnown RBP23.06■■□□□ 1.28
DDX54-208ENST00000551344 ABHD8Q96I13 439 aa23.06■■□□□ 1.28
DDX54-208ENST00000551344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.06■■□□□ 1.28
DDX54-208ENST00000551344 PICK1Q9NRD5 415 aa23.06■■□□□ 1.28
DDX54-208ENST00000551344 KCNH4Q9UQ05 1017 aa23.06■■□□□ 1.28
DDX54-208ENST00000551344 MYO5AQ9Y4I1 1855 aaKnown RBP23.05■■□□□ 1.28
DDX54-208ENST00000551344 MAST2Q6P0Q8 1798 aa23.05■■□□□ 1.28
DDX54-208ENST00000551344 AAMPQ13685 434 aa23.05■■□□□ 1.28
DDX54-208ENST00000551344 SLC9C2Q5TAH2 1124 aa23.05■■□□□ 1.28
DDX54-208ENST00000551344 CTU1Q7Z7A3 348 aaKnown RBP23.05■■□□□ 1.28
DDX54-208ENST00000551344 FOXP4Q8IVH2 680 aaPredicted RBP23.05■■□□□ 1.28
DDX54-208ENST00000551344 MAPKAPK5Q8IW41 473 aa23.05■■□□□ 1.28
DDX54-208ENST00000551344 MIGA1Q8NAN2 632 aa23.05■■□□□ 1.28
DDX54-208ENST00000551344 HAUS7Q99871 368 aa23.05■■□□□ 1.28
DDX54-208ENST00000551344 ZCCHC17Q9NP64 241 aaKnown RBP23.05■■□□□ 1.28
DDX54-208ENST00000551344 PAG1Q9NWQ8 432 aa23.05■■□□□ 1.28
DDX54-208ENST00000551344 HERC5Q9UII4 1024 aaKnown RBP23.05■■□□□ 1.28
DDX54-208ENST00000551344 FLT1P17948 1338 aa23.05■■□□□ 1.28
DDX54-208ENST00000551344 CXCL11O14625 94 aa23.04■■□□□ 1.28
DDX54-208ENST00000551344 SLURP2P0DP57 97 aa23.04■■□□□ 1.28
DDX54-208ENST00000551344 CRHR2Q13324 411 aa23.04■■□□□ 1.28
DDX54-208ENST00000551344 CAPN15O75808 1086 aa23.03■■□□□ 1.28
DDX54-208ENST00000551344 PDE6AP16499 860 aa23.03■■□□□ 1.28
DDX54-208ENST00000551344 PTPRAP18433 802 aa23.03■■□□□ 1.28
DDX54-208ENST00000551344 FAM43AQ8N2R8 423 aa23.03■■□□□ 1.28
DDX54-208ENST00000551344 ZFYVE28Q9HCC9 887 aa23.03■■□□□ 1.28
DDX54-208ENST00000551344 ECHDC1Q9NTX5 307 aa23.03■■□□□ 1.28
DDX54-208ENST00000551344 ZHX2Q9Y6X8 837 aa23.03■■□□□ 1.28
DDX54-208ENST00000551344 DOCK2Q92608 1830 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms