RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 PDE6AP16499 860 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 GNAT2P19087 354 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 USP5P45974 858 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 VEGFBP49765 207 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 SREBF2Q12772 1141 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 LDLRAD1Q5T700 205 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 NBPF12Q5TAG4 269 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-213ENST00000550964 TTC6Q86TZ1 520 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 FOXP4Q8IVH2 680 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-213ENST00000550964 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 TEPSINQ96N21 525 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 GINM1Q9NU53 330 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 PI4KBQ9UBF8 816 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 PCDHAC2Q9Y5I4 1007 aa12.1□□□□□ -0.47
PFDN5-213ENST00000550964 ADD2P35612 726 aa12.09□□□□□ -0.47
PFDN5-213ENST00000550964 RHBDL3P58872 404 aa12.09□□□□□ -0.47
PFDN5-213ENST00000550964 TCP10Q12799 353 aa12.09□□□□□ -0.47
PFDN5-213ENST00000550964 OTUD7BQ6GQQ9 843 aa12.09□□□□□ -0.47
PFDN5-213ENST00000550964 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
PFDN5-213ENST00000550964 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
PFDN5-213ENST00000550964 LAMB1P07942 1786 aa12.09□□□□□ -0.47
PFDN5-213ENST00000550964 ZNF532Q9HCE3 1301 aa12.09□□□□□ -0.47
PFDN5-213ENST00000550964 THSD7BQ9C0I4 1608 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 MYH8P13535 1937 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 HIP1O00291 1037 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 USP2O75604 605 aaPredicted RBP12.08□□□□□ -0.48
PFDN5-213ENST00000550964 ALDH1A1P00352 501 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 SLC10A3P09131 477 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 CACNB3P54284 484 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 PDE1AP54750 535 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
PFDN5-213ENST00000550964 FMR1Q06787 632 aaKnown RBP eCLIP12.08□□□□□ -0.48
PFDN5-213ENST00000550964 PICALMQ13492 652 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 PRAMEF18Q5VWM3 479 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 CYP4F22Q6NT55 531 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 OSBPL5Q9H0X9 879 aaPredicted RBP12.08□□□□□ -0.48
PFDN5-213ENST00000550964 ANTXR1Q9H6X2 564 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 FAM198AQ9UFP1 575 aa12.08□□□□□ -0.48
PFDN5-213ENST00000550964 RFX7Q2KHR2 1363 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 MANSC4A6NHS7 340 aaPredicted RBP12.07□□□□□ -0.48
PFDN5-213ENST00000550964 RNF113AO15541 343 aaKnown RBP12.07□□□□□ -0.48
PFDN5-213ENST00000550964 HTRA3P83110 453 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 MAP3K10Q02779 954 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 NFIAQ12857 509 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 GIMAP6Q6P9H5 292 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
PFDN5-213ENST00000550964 ERO1BQ86YB8 467 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 CRACR2BQ8N4Y2 399 aaPredicted RBP12.07□□□□□ -0.48
PFDN5-213ENST00000550964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.07□□□□□ -0.481e-23■■□□□ 11.4
PFDN5-213ENST00000550964 SH3RF3Q8TEJ3 882 aaPredicted RBP12.07□□□□□ -0.48
PFDN5-213ENST00000550964 ZNF384Q8TF68 577 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 TGFBRAP1Q8WUH2 860 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 FSD1Q9BTV5 496 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 LNPKQ9C0E8 428 aa12.07□□□□□ -0.48
PFDN5-213ENST00000550964 NAV1Q8NEY1 1877 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
PFDN5-213ENST00000550964 IGHDP01880 384 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 PPATQ06203 517 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 GRM1Q13255 1194 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 PRKG1Q13976 671 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 PI4K2BQ8TCG2 481 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 APPBP2Q92624 585 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 WRNIP1Q96S55 665 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 NACAP1Q9BZK3 213 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.06□□□□□ -0.48
PFDN5-213ENST00000550964 ZNF287Q9HBT7 754 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 PICK1Q9NRD5 415 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 SAGE1Q9NXZ1 904 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 ZNF112Q9UJU3 913 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 SCAF8Q9UPN6 1271 aaKnown RBP12.06□□□□□ -0.48
PFDN5-213ENST00000550964 OTOFQ9HC10 1997 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 SALL3Q9BXA9 1300 aa12.06□□□□□ -0.48
PFDN5-213ENST00000550964 TCRBV5S4A2TA0A5A2 114 aa12.05□□□□□ -0.48
PFDN5-213ENST00000550964 TRIM6-TRIM34B2RNG4 842 aa12.05□□□□□ -0.48
PFDN5-213ENST00000550964 GTF2A2P52657 109 aa12.05□□□□□ -0.48
PFDN5-213ENST00000550964 IRX6P78412 446 aaPredicted RBP12.05□□□□□ -0.48
PFDN5-213ENST00000550964 NOL9Q5SY16 702 aaKnown RBP12.05□□□□□ -0.48
PFDN5-213ENST00000550964 RASAL3Q86YV0 1011 aa12.05□□□□□ -0.48
PFDN5-213ENST00000550964 MIGA1Q8NAN2 632 aa12.05□□□□□ -0.48
PFDN5-213ENST00000550964 RIOK1Q9BRS2 568 aaKnown RBP12.05□□□□□ -0.48
PFDN5-213ENST00000550964 EHD4Q9H223 541 aa12.05□□□□□ -0.48
PFDN5-213ENST00000550964 NDUFB9Q9Y6M9 179 aa12.05□□□□□ -0.48
PFDN5-213ENST00000550964 DOCK1Q14185 1865 aa12.05□□□□□ -0.48
PFDN5-213ENST00000550964 FLT1P17948 1338 aa12.05□□□□□ -0.48
PFDN5-213ENST00000550964 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 FAM155AB1AL88 458 aaPredicted RBP12.04□□□□□ -0.48
PFDN5-213ENST00000550964 POLR3DP05423 398 aaPredicted RBP12.04□□□□□ -0.48
PFDN5-213ENST00000550964 TM4SF4P48230 202 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 DLK2Q6UY11 383 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 ADGRA1Q86SQ6 560 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 MAPKAPK5Q8IW41 473 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 CCDC136Q96JN2 1154 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 AS3MTQ9HBK9 375 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 ZCCHC17Q9NP64 241 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms