RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 MKRN3Q13064 507 aaKnown RBP16.62■□□□□ 0.25
TROAP-213ENST00000550709 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
TROAP-213ENST00000550709 SH3BP5LQ7L8J4 393 aa16.62■□□□□ 0.25
TROAP-213ENST00000550709 CCDC102AQ96A19 550 aa16.62■□□□□ 0.25
TROAP-213ENST00000550709 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
TROAP-213ENST00000550709 SLC10A4Q96EP9 437 aa16.62■□□□□ 0.25
TROAP-213ENST00000550709 STAP2Q9UGK3 403 aa16.62■□□□□ 0.25
TROAP-213ENST00000550709 SLURP2P0DP57 97 aa16.61■□□□□ 0.25
TROAP-213ENST00000550709 USP5P45974 858 aa16.61■□□□□ 0.25
TROAP-213ENST00000550709 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
TROAP-213ENST00000550709 DCAF15Q66K64 600 aa16.61■□□□□ 0.25
TROAP-213ENST00000550709 TMED8Q6PL24 325 aaPredicted RBP16.61■□□□□ 0.25
TROAP-213ENST00000550709 JMYQ8N9B5 988 aa16.61■□□□□ 0.25
TROAP-213ENST00000550709 KBTBD3Q8NAB2 608 aa16.61■□□□□ 0.25
TROAP-213ENST00000550709 ZIC5Q96T25 663 aa16.61■□□□□ 0.25
TROAP-213ENST00000550709 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
TROAP-213ENST00000550709 RFX7Q2KHR2 1363 aa16.61■□□□□ 0.25
TROAP-213ENST00000550709 FAM155AB1AL88 458 aaPredicted RBP16.6■□□□□ 0.25
TROAP-213ENST00000550709 SLC10A3P09131 477 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 SLC4A8Q2Y0W8 1093 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 ZSCAN25Q6NSZ9 544 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 RASAL3Q86YV0 1011 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 WRNIP1Q96S55 665 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 RIOK1Q9BRS2 568 aaKnown RBP16.6■□□□□ 0.25
TROAP-213ENST00000550709 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 ZNF341Q9BYN7 854 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 OSBPL5Q9H0X9 879 aaPredicted RBP16.6■□□□□ 0.25
TROAP-213ENST00000550709 ARMT1Q9H993 441 aa16.6■□□□□ 0.25
TROAP-213ENST00000550709 RPAP1Q9BWH6 1393 aaPredicted RBP16.6■□□□□ 0.25
TROAP-213ENST00000550709 TRPM7Q96QT4 1865 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
TROAP-213ENST00000550709 MBD4O95243 580 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 NOGQ13253 232 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 UBE3CQ15386 1083 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 ANKRD13AQ8IZ07 590 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 ELP3Q9H9T3 547 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 FLT1P17948 1338 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
TROAP-213ENST00000550709 MYH2Q9UKX2 1941 aa16.58■□□□□ 0.25
TROAP-213ENST00000550709 RNF113AO15541 343 aaKnown RBP16.58■□□□□ 0.24
TROAP-213ENST00000550709 KIF23Q02241 960 aaPredicted RBP16.58■□□□□ 0.24
TROAP-213ENST00000550709 VGLL4Q14135 290 aa16.58■□□□□ 0.24
TROAP-213ENST00000550709 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.58■□□□□ 0.24
TROAP-213ENST00000550709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.243e-11■□□□□ 9.2
TROAP-213ENST00000550709 ZKSCAN4Q969J2 545 aaPredicted RBP16.58■□□□□ 0.24
TROAP-213ENST00000550709 CRNKL1Q9BZJ0 848 aaKnown RBP16.58■□□□□ 0.24
TROAP-213ENST00000550709 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
TROAP-213ENST00000550709 CSADQ9Y600 493 aa16.58■□□□□ 0.24
TROAP-213ENST00000550709 FAM196BA6NMK8 535 aa16.57■□□□□ 0.24
TROAP-213ENST00000550709 TRIM6-TRIM34B2RNG4 842 aa16.57■□□□□ 0.24
TROAP-213ENST00000550709 PRKAB2O43741 272 aa16.57■□□□□ 0.24
TROAP-213ENST00000550709 PDE4AP27815 886 aa16.57■□□□□ 0.24
TROAP-213ENST00000550709 INPP5BP32019 993 aa16.57■□□□□ 0.24
TROAP-213ENST00000550709 MAP2K2P36507 400 aa16.57■□□□□ 0.24
TROAP-213ENST00000550709 AIDAQ96BJ3 306 aa16.57■□□□□ 0.24
TROAP-213ENST00000550709 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
TROAP-213ENST00000550709 PCNTO95613 3336 aa16.57■□□□□ 0.24
TROAP-213ENST00000550709 LRRFIP1Q32MZ4 808 aaKnown RBP16.56■□□□□ 0.24
TROAP-213ENST00000550709 SPRYD7Q5W111 196 aa16.56■□□□□ 0.24
TROAP-213ENST00000550709 SDR42E1Q8WUS8 393 aa16.56■□□□□ 0.24
TROAP-213ENST00000550709 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
TROAP-213ENST00000550709 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
TROAP-213ENST00000550709 RILPL2Q969X0 211 aa16.56■□□□□ 0.24
TROAP-213ENST00000550709 EVI5LQ96CN4 794 aa16.56■□□□□ 0.24
TROAP-213ENST00000550709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.56■□□□□ 0.24
TROAP-213ENST00000550709 ATRNL1Q5VV63 1379 aa16.55■□□□□ 0.24
TROAP-213ENST00000550709 ZFYP08048 801 aaPredicted RBP16.55■□□□□ 0.24
TROAP-213ENST00000550709 HSPA1AP0DMV8 641 aaKnown RBP16.55■□□□□ 0.24
TROAP-213ENST00000550709 HSPA1BP0DMV9 641 aaKnown RBP16.55■□□□□ 0.24
TROAP-213ENST00000550709 MAP2K1Q02750 393 aaPredicted RBP16.55■□□□□ 0.24
TROAP-213ENST00000550709 APPBP2Q92624 585 aa16.55■□□□□ 0.24
TROAP-213ENST00000550709 WNK4Q96J92 1243 aa16.55■□□□□ 0.24
TROAP-213ENST00000550709 DHX36Q9H2U1 1008 aaKnown RBP16.55■□□□□ 0.24
TROAP-213ENST00000550709 PI4KBQ9UBF8 816 aa16.55■□□□□ 0.24
TROAP-213ENST00000550709 SNCAIPQ9Y6H5 919 aa16.55■□□□□ 0.24
TROAP-213ENST00000550709 UNCXA6NJT0 531 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 POLR3DP05423 398 aaPredicted RBP16.54■□□□□ 0.24
TROAP-213ENST00000550709 HLA-DOAP06340 250 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 GJA5P36382 358 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 CRACR2BQ8N4Y2 399 aaPredicted RBP16.54■□□□□ 0.24
TROAP-213ENST00000550709 OPTNQ96CV9 577 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 CCDC136Q96JN2 1154 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 SEC62Q99442 399 aaKnown RBP16.54■□□□□ 0.24
TROAP-213ENST00000550709 TRIM34Q9BYJ4 488 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 MCM9Q9NXL9 1143 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 ZNF112Q9UJU3 913 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 ECM29Q5VYK3 1845 aa16.54■□□□□ 0.24
TROAP-213ENST00000550709 M0R2C6 588 aa16.53■□□□□ 0.24
TROAP-213ENST00000550709 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
TROAP-213ENST00000550709 BEGAINQ9BUH8 593 aa16.53■□□□□ 0.24
TROAP-213ENST00000550709 OSBPL3Q9H4L5 887 aa16.53■□□□□ 0.24
TROAP-213ENST00000550709 DCP1AQ9NPI6 582 aaPredicted RBP16.53■□□□□ 0.24
TROAP-213ENST00000550709 WBP1LQ9NX94 342 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms