RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 GABPB2Q8TAK5 448 aaPredicted RBP13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 NOC4LQ9BVI4 516 aaKnown RBP13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 PPANQ9NQ55 473 aaKnown RBP13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 ERCC6LQ2NKX8 1250 aa13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 NKIRAS1Q9NYS0 192 aa13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 RIMBP2O15034 1052 aa13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 GNPATO15228 680 aa13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 NBPF11Q86T75 865 aa13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 CCT6BQ92526 530 aa13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 PLIN2Q99541 437 aa13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 TMOD4Q9NZQ9 345 aa13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 SAP30BPQ9UHR5 308 aaKnown RBP13.99□□□□□ -0.17
RAB3IP-212ENST00000550536 STRN3Q13033 797 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 TTC6Q86TZ1 520 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 JAG2Q9Y219 1238 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 RPS6KB1P23443 525 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 LETM2Q2VYF4 491 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 LIN9Q5TKA1 542 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 EDC4Q6P2E9 1401 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 COL17A1Q9UMD9 1497 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 MYL5Q02045 173 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 MTHFSDQ2M296 383 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 TRAPPC3LQ5T215 181 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 ACTN4O43707 911 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 CHMLP26374 656 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 TEX11Q8IYF3 940 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 EXOC7Q9UPT5 735 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 SPOPO43791 374 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 MBD4O95243 580 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 CLUL1Q15846 466 aa13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 ANGEL1Q9UNK9 670 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 TRIM6Q9C030 488 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-212ENST00000550536 MAST3O60307 1309 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 GTF2A1P52655 376 aaPredicted RBP13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 ARFGAP2Q8N6H7 521 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 HAUS7Q99871 368 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 ZKSCAN3Q9BRR0 538 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 AOX1Q06278 1338 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 CIB2O75838 187 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 DNAJC21Q5F1R6 531 aaKnown RBP13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 FYB2Q5VWT5 728 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 NOP56O00567 594 aaKnown RBP13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 TRPC3Q13507 836 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 SMC5Q8IY18 1101 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 STMN2Q93045 179 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 TMEM87BQ96K49 555 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 ERCC5P28715 1186 aaPredicted RBP13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 UAP1Q16222 522 aaPredicted RBP13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 LEO1Q8WVC0 666 aaPredicted RBP13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 RASA3Q14644 834 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 RBM26Q5T8P6 1007 aaKnown RBP13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 KRT9P35527 623 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 PPP2R3AQ06190 1150 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 GPCPD1Q9NPB8 672 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 CLCN1P35523 988 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 BRDTQ58F21 947 aaPredicted RBP13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 LZTS2Q9BRK4 669 aa13.97□□□□□ -0.17
RAB3IP-212ENST00000550536 A0A1B0GVL5 298 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 CHMP2AO43633 222 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 ATP11AP98196 1134 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 ZNF174Q15697 407 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 HELBQ8NG08 1087 aaPredicted RBP13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 IGSF22Q8N9C0 903 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 LRRC59Q96AG4 307 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 UHRF1BP1Q6BDS2 1440 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 B4GALNT4Q76KP1 1039 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 CEP57Q86XR8 500 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 POLR2DO15514 142 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 AFAP1L2Q8N4X5 818 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 PROCA1Q8NCQ7 364 aaPredicted RBP13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 ITIH3Q06033 890 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 INTS8Q75QN2 995 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 PKD2L1Q9P0L9 805 aa13.96□□□□□ -0.17
RAB3IP-212ENST00000550536 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.18
RAB3IP-212ENST00000550536 TUBB2AQ13885 445 aa13.96□□□□□ -0.18
RAB3IP-212ENST00000550536 TUBB2BQ9BVA1 445 aa13.96□□□□□ -0.18
RAB3IP-212ENST00000550536 CCDC169A6NNP5 214 aa13.96□□□□□ -0.18
RAB3IP-212ENST00000550536 TCOF1Q13428 1488 aaKnown RBP13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 UFL1O94874 794 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 C8orf34Q49A92 452 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 XRCC6P12956 609 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 ITGA6P23229 1130 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 LACTBP83111 547 aaPredicted RBP13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 HOOK2Q96ED9 719 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 EPSTI1Q96J88 318 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 USP26Q9BXU7 913 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 MICALL1Q8N3F8 863 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 NOX5Q96PH1 765 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 ARID4AP29374 1257 aaPredicted RBP13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 CALCRLQ16602 461 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 ASIC2Q16515 512 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 SYNMO15061 1565 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 VPS52Q8N1B4 723 aa13.95□□□□□ -0.18
RAB3IP-212ENST00000550536 RNF34Q969K3 372 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms