RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 DDX19BQ9UMR2 479 aa24.46■■□□□ 1.51
GCN1-207ENST00000550471 RFX7Q2KHR2 1363 aa24.45■■□□□ 1.5
GCN1-207ENST00000550471 BAG3O95817 575 aa24.45■■□□□ 1.5
GCN1-207ENST00000550471 MAP3K10Q02779 954 aa24.45■■□□□ 1.5
GCN1-207ENST00000550471 R3HDMLQ9H3Y0 253 aa24.45■■□□□ 1.5
GCN1-207ENST00000550471 IRF6O14896 467 aa24.44■■□□□ 1.5
GCN1-207ENST00000550471 MCAMP43121 646 aa24.44■■□□□ 1.5
GCN1-207ENST00000550471 CEP85Q6P2H3 762 aa24.44■■□□□ 1.5
GCN1-207ENST00000550471 CERS3Q8IU89 383 aa24.44■■□□□ 1.5
GCN1-207ENST00000550471 RPAP2Q8IXW5 612 aaPredicted RBP24.44■■□□□ 1.5
GCN1-207ENST00000550471 KCNH4Q9UQ05 1017 aa24.44■■□□□ 1.5
GCN1-207ENST00000550471 CXCL11O14625 94 aa24.43■■□□□ 1.5
GCN1-207ENST00000550471 TBC1D12O60347 775 aa24.43■■□□□ 1.5
GCN1-207ENST00000550471 HMMRO75330 724 aa24.43■■□□□ 1.5
GCN1-207ENST00000550471 CNKSR2Q8WXI2 1034 aa24.43■■□□□ 1.5
GCN1-207ENST00000550471 C1orf115Q9H7X2 142 aa24.43■■□□□ 1.5
GCN1-207ENST00000550471 PICK1Q9NRD5 415 aa24.43■■□□□ 1.5
GCN1-207ENST00000550471 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.43■■□□□ 1.5
GCN1-207ENST00000550471 COL2A1P02458 1487 aaPredicted RBP24.43■■□□□ 1.5
GCN1-207ENST00000550471 AK9Q5TCS8 1911 aa24.42■■□□□ 1.5
GCN1-207ENST00000550471 INPP5BP32019 993 aa24.42■■□□□ 1.5
GCN1-207ENST00000550471 TRIM17Q9Y577 477 aa24.42■■□□□ 1.5
GCN1-207ENST00000550471 ATRNL1Q5VV63 1379 aa24.42■■□□□ 1.5
GCN1-207ENST00000550471 CTNND1O60716 968 aaKnown RBP24.41■■□□□ 1.5
GCN1-207ENST00000550471 GNRH1P01148 92 aa24.41■■□□□ 1.5
GCN1-207ENST00000550471 RHBDL3P58872 404 aa24.41■■□□□ 1.5
GCN1-207ENST00000550471 OTOP1Q7RTM1 612 aa24.41■■□□□ 1.5
GCN1-207ENST00000550471 ANKRD23Q86SG2 305 aa24.41■■□□□ 1.5
GCN1-207ENST00000550471 SCYL3Q8IZE3 742 aa24.41■■□□□ 1.5
GCN1-207ENST00000550471 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.41■■□□□ 1.5
GCN1-207ENST00000550471 DBNDD2Q9BQY9 259 aa24.41■■□□□ 1.5
GCN1-207ENST00000550471 EFCC1Q9HA90 598 aa24.41■■□□□ 1.5
GCN1-207ENST00000550471 TLR2O60603 784 aa24.4■■□□□ 1.5
GCN1-207ENST00000550471 KIF22Q14807 665 aa24.4■■□□□ 1.5
GCN1-207ENST00000550471 NAA16Q6N069 864 aaPredicted RBP24.4■■□□□ 1.5
GCN1-207ENST00000550471 PANK1Q8TE04 598 aa24.4■■□□□ 1.5
GCN1-207ENST00000550471 TBC1D2Q9BYX2 928 aa24.4■■□□□ 1.5
GCN1-207ENST00000550471 RCAN3Q9UKA8 241 aa24.4■■□□□ 1.5
GCN1-207ENST00000550471 BTBD19C9JJ37 291 aa24.39■■□□□ 1.49
GCN1-207ENST00000550471 PICALMQ13492 652 aa24.39■■□□□ 1.49
GCN1-207ENST00000550471 PI16Q6UXB8 463 aa24.39■■□□□ 1.49
GCN1-207ENST00000550471 TBC1D9Q6ZT07 1266 aa24.39■■□□□ 1.49
GCN1-207ENST00000550471 FASTKD5Q7L8L6 764 aaKnown RBP24.39■■□□□ 1.49
GCN1-207ENST00000550471 FAM43AQ8N2R8 423 aa24.39■■□□□ 1.49
GCN1-207ENST00000550471 DHX36Q9H2U1 1008 aaKnown RBP24.39■■□□□ 1.49
GCN1-207ENST00000550471 PHF20L1A8MW92 1017 aa24.38■■□□□ 1.49
GCN1-207ENST00000550471 PPP4CP60510 307 aa24.38■■□□□ 1.49
GCN1-207ENST00000550471 ZFPM1Q8IX07 1006 aa24.38■■□□□ 1.49
GCN1-207ENST00000550471 PRMT2P55345 433 aa24.37■■□□□ 1.49
GCN1-207ENST00000550471 TEX11Q8IYF3 940 aa24.37■■□□□ 1.49
GCN1-207ENST00000550471 ZNF384Q8TF68 577 aa24.37■■□□□ 1.49
GCN1-207ENST00000550471 OSBPL5Q9H0X9 879 aaPredicted RBP24.37■■□□□ 1.49
GCN1-207ENST00000550471 DDX4Q9NQI0 724 aaKnown RBP24.37■■□□□ 1.49
GCN1-207ENST00000550471 HERC5Q9UII4 1024 aaKnown RBP24.37■■□□□ 1.49
GCN1-207ENST00000550471 DBNLQ9UJU6 430 aaKnown RBP24.37■■□□□ 1.49
GCN1-207ENST00000550471 PTPN22Q9Y2R2 807 aa24.37■■□□□ 1.49
GCN1-207ENST00000550471 DOCK2Q92608 1830 aa24.36■■□□□ 1.49
GCN1-207ENST00000550471 DDTLA6NHG4 134 aaPredicted RBP24.36■■□□□ 1.49
GCN1-207ENST00000550471 SH3BP5LQ7L8J4 393 aa24.36■■□□□ 1.49
GCN1-207ENST00000550471 CD99L2Q8TCZ2 262 aa24.36■■□□□ 1.49
GCN1-207ENST00000550471 SLC45A1Q9Y2W3 748 aa24.36■■□□□ 1.49
GCN1-207ENST00000550471 CYP2E1P05181 493 aaPredicted RBP24.35■■□□□ 1.49
GCN1-207ENST00000550471 PDE3AQ14432 1141 aa24.35■■□□□ 1.49
GCN1-207ENST00000550471 CLASRPQ8N2M8 674 aaKnown RBP24.35■■□□□ 1.49
GCN1-207ENST00000550471 EAF2Q96CJ1 260 aaPredicted RBP24.35■■□□□ 1.49
GCN1-207ENST00000550471 KIF1BPQ96EK5 621 aa24.35■■□□□ 1.49
GCN1-207ENST00000550471 PARK7Q99497 189 aaKnown RBP24.35■■□□□ 1.49
GCN1-207ENST00000550471 PI4KBQ9UBF8 816 aa24.35■■□□□ 1.49
GCN1-207ENST00000550471 RAB11FIP3O75154 756 aa24.34■■□□□ 1.49
GCN1-207ENST00000550471 PTPRAP18433 802 aa24.34■■□□□ 1.49
GCN1-207ENST00000550471 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.34■■□□□ 1.49
GCN1-207ENST00000550471 SNRKQ9NRH2 765 aa24.34■■□□□ 1.49
GCN1-207ENST00000550471 ZBTB40Q9NUA8 1239 aa24.34■■□□□ 1.49
GCN1-207ENST00000550471 ZHX2Q9Y6X8 837 aa24.34■■□□□ 1.49
GCN1-207ENST00000550471 PDHXO00330 501 aa24.33■■□□□ 1.49
GCN1-207ENST00000550471 TTF1Q15361 905 aaPredicted RBP24.33■■□□□ 1.49
GCN1-207ENST00000550471 AACSQ86V21 672 aa24.33■■□□□ 1.49
GCN1-207ENST00000550471 CCDC8Q9H0W5 538 aaPredicted RBP24.33■■□□□ 1.49
GCN1-207ENST00000550471 GINM1Q9NU53 330 aa24.33■■□□□ 1.49
GCN1-207ENST00000550471 A0A0G2JLL6 359 aaPredicted RBP24.32■■□□□ 1.48
GCN1-207ENST00000550471 ZAP70P43403 619 aa24.32■■□□□ 1.48
GCN1-207ENST00000550471 SOX10P56693 466 aa24.32■■□□□ 1.48
GCN1-207ENST00000550471 MAP3K12Q12852 859 aa24.32■■□□□ 1.48
GCN1-207ENST00000550471 PRRT2Q7Z6L0 340 aaPredicted RBP24.32■■□□□ 1.48
GCN1-207ENST00000550471 NBPF11Q86T75 865 aa24.32■■□□□ 1.48
GCN1-207ENST00000550471 RHPN1Q8TCX5 695 aa24.32■■□□□ 1.48
GCN1-207ENST00000550471 EXOC6BQ9Y2D4 811 aa24.32■■□□□ 1.48
GCN1-207ENST00000550471 AFG3L2Q9Y4W6 797 aa24.32■■□□□ 1.48
GCN1-207ENST00000550471 MAST2Q6P0Q8 1798 aa24.31■■□□□ 1.48
GCN1-207ENST00000550471 HOXD10P28358 340 aa24.31■■□□□ 1.48
GCN1-207ENST00000550471 LACTBP83111 547 aaPredicted RBP24.31■■□□□ 1.48
GCN1-207ENST00000550471 FOXP4Q8IVH2 680 aaPredicted RBP24.31■■□□□ 1.48
GCN1-207ENST00000550471 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.31■■□□□ 1.48
GCN1-207ENST00000550471 AATFQ9NY61 560 aaKnown RBP eCLIP24.31■■□□□ 1.48
GCN1-207ENST00000550471 COG6Q9Y2V7 657 aa24.31■■□□□ 1.48
GCN1-207ENST00000550471 C17orf99Q6UX52 265 aa24.3■■□□□ 1.48
GCN1-207ENST00000550471 ARMC5Q96C12 935 aa24.3■■□□□ 1.48
GCN1-207ENST00000550471 SH3RF3Q8TEJ3 882 aaPredicted RBP24.29■■□□□ 1.48
GCN1-207ENST00000550471 TRIM34Q9BYJ4 488 aa24.29■■□□□ 1.48
GCN1-207ENST00000550471 AS3MTQ9HBK9 375 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms