RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 NOL9Q5SY16 702 aaKnown RBP29.61■■■□□ 2.33
USP44-205ENST00000549639 TBC1D9Q6ZT07 1266 aa29.61■■■□□ 2.33
USP44-205ENST00000549639 INPP5BP32019 993 aa29.6■■■□□ 2.33
USP44-205ENST00000549639 ZFPM1Q8IX07 1006 aa29.6■■■□□ 2.33
USP44-205ENST00000549639 ZNF384Q8TF68 577 aa29.6■■■□□ 2.33
USP44-205ENST00000549639 IRF6O14896 467 aa29.59■■■□□ 2.33
USP44-205ENST00000549639 RHBDL3P58872 404 aa29.59■■■□□ 2.33
USP44-205ENST00000549639 ZSCAN29Q8IWY8 852 aaPredicted RBP29.59■■■□□ 2.33
USP44-205ENST00000549639 RPAP2Q8IXW5 612 aaPredicted RBP29.59■■■□□ 2.33
USP44-205ENST00000549639 ERO1AQ96HE7 468 aa29.59■■■□□ 2.33
USP44-205ENST00000549639 ZFYVE28Q9HCC9 887 aa29.59■■■□□ 2.33
USP44-205ENST00000549639 MAP3K10Q02779 954 aa29.58■■■□□ 2.33
USP44-205ENST00000549639 ATRNL1Q5VV63 1379 aa29.58■■■□□ 2.33
USP44-205ENST00000549639 FBXO46Q6PJ61 603 aaPredicted RBP29.58■■■□□ 2.33
USP44-205ENST00000549639 TAF1CQ15572 869 aaPredicted RBP29.57■■■□□ 2.32
USP44-205ENST00000549639 NOL10Q9BSC4 688 aaKnown RBP29.57■■■□□ 2.32
USP44-205ENST00000549639 DBNLQ9UJU6 430 aaKnown RBP29.57■■■□□ 2.32
USP44-205ENST00000549639 HPS5Q9UPZ3 1129 aa29.57■■■□□ 2.32
USP44-205ENST00000549639 DOCK2Q92608 1830 aa29.57■■■□□ 2.32
USP44-205ENST00000549639 HMMRO75330 724 aa29.56■■■□□ 2.32
USP44-205ENST00000549639 PICALMQ13492 652 aa29.56■■■□□ 2.32
USP44-205ENST00000549639 EAF2Q96CJ1 260 aaPredicted RBP29.56■■■□□ 2.32
USP44-205ENST00000549639 DDX4Q9NQI0 724 aaKnown RBP29.56■■■□□ 2.32
USP44-205ENST00000549639 SNRKQ9NRH2 765 aa29.56■■■□□ 2.32
USP44-205ENST00000549639 BAG3O95817 575 aa29.55■■■□□ 2.32
USP44-205ENST00000549639 SP3Q02447 781 aa29.55■■■□□ 2.32
USP44-205ENST00000549639 SH3BP5LQ7L8J4 393 aa29.55■■■□□ 2.32
USP44-205ENST00000549639 FAM43AQ8N2R8 423 aa29.55■■■□□ 2.32
USP44-205ENST00000549639 ZBTB40Q9NUA8 1239 aa29.55■■■□□ 2.32
USP44-205ENST00000549639 KCNH4Q9UQ05 1017 aa29.55■■■□□ 2.32
USP44-205ENST00000549639 COG6Q9Y2V7 657 aa29.55■■■□□ 2.32
USP44-205ENST00000549639 COL2A1P02458 1487 aaPredicted RBP29.55■■■□□ 2.32
USP44-205ENST00000549639 DDTLA6NHG4 134 aaPredicted RBP29.54■■■□□ 2.32
USP44-205ENST00000549639 PHF20L1A8MW92 1017 aa29.54■■■□□ 2.32
USP44-205ENST00000549639 NAA16Q6N069 864 aaPredicted RBP29.54■■■□□ 2.32
USP44-205ENST00000549639 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.54■■■□□ 2.32
USP44-205ENST00000549639 CCDC8Q9H0W5 538 aaPredicted RBP29.54■■■□□ 2.32
USP44-205ENST00000549639 EXOC6BQ9Y2D4 811 aa29.54■■■□□ 2.32
USP44-205ENST00000549639 TBC1D12O60347 775 aa29.53■■■□□ 2.32
USP44-205ENST00000549639 CYP2E1P05181 493 aaPredicted RBP29.53■■■□□ 2.32
USP44-205ENST00000549639 PLCG2P16885 1265 aa29.53■■■□□ 2.32
USP44-205ENST00000549639 ARHGEF6Q15052 776 aa29.53■■■□□ 2.32
USP44-205ENST00000549639 MLLT1Q03111 559 aaPredicted RBP29.52■■■□□ 2.32
USP44-205ENST00000549639 PDE3AQ14432 1141 aa29.52■■■□□ 2.32
USP44-205ENST00000549639 SCYL3Q8IZE3 742 aa29.52■■■□□ 2.32
USP44-205ENST00000549639 PICK1Q9NRD5 415 aa29.52■■■□□ 2.32
USP44-205ENST00000549639 TRIM17Q9Y577 477 aa29.52■■■□□ 2.32
USP44-205ENST00000549639 MAST2Q6P0Q8 1798 aa29.52■■■□□ 2.32
USP44-205ENST00000549639 BTBD19C9JJ37 291 aa29.51■■■□□ 2.31
USP44-205ENST00000549639 CXCL11O14625 94 aa29.51■■■□□ 2.31
USP44-205ENST00000549639 CTNND1O60716 968 aaKnown RBP29.51■■■□□ 2.31
USP44-205ENST00000549639 ZAP70P43403 619 aa29.51■■■□□ 2.31
USP44-205ENST00000549639 PPP4CP60510 307 aa29.51■■■□□ 2.31
USP44-205ENST00000549639 TMED8Q6PL24 325 aaPredicted RBP29.51■■■□□ 2.31
USP44-205ENST00000549639 TEX11Q8IYF3 940 aa29.51■■■□□ 2.31
USP44-205ENST00000549639 TLR7Q9NYK1 1049 aaKnown RBP29.51■■■□□ 2.31
USP44-205ENST00000549639 OTOP1Q7RTM1 612 aa29.5■■■□□ 2.31
USP44-205ENST00000549639 ANKRD23Q86SG2 305 aa29.5■■■□□ 2.31
USP44-205ENST00000549639 AACSQ86V21 672 aa29.5■■■□□ 2.31
USP44-205ENST00000549639 OSBPL5Q9H0X9 879 aaPredicted RBP29.5■■■□□ 2.31
USP44-205ENST00000549639 TLR2O60603 784 aa29.49■■■□□ 2.31
USP44-205ENST00000549639 RHPN1Q8TCX5 695 aa29.49■■■□□ 2.31
USP44-205ENST00000549639 KIF1BPQ96EK5 621 aa29.49■■■□□ 2.31
USP44-205ENST00000549639 CD99L2Q8TCZ2 262 aa29.48■■■□□ 2.31
USP44-205ENST00000549639 DHX36Q9H2U1 1008 aaKnown RBP29.48■■■□□ 2.31
USP44-205ENST00000549639 EFCC1Q9HA90 598 aa29.48■■■□□ 2.31
USP44-205ENST00000549639 CERS3Q8IU89 383 aa29.47■■■□□ 2.31
USP44-205ENST00000549639 CLASRPQ8N2M8 674 aaKnown RBP29.47■■■□□ 2.31
USP44-205ENST00000549639 AATFQ9NY61 560 aaKnown RBP eCLIP29.47■■■□□ 2.31
USP44-205ENST00000549639 RAB11FIP3O75154 756 aa29.46■■■□□ 2.31
USP44-205ENST00000549639 PTPRAP18433 802 aa29.46■■■□□ 2.31
USP44-205ENST00000549639 SH3RF3Q8TEJ3 882 aaPredicted RBP29.46■■■□□ 2.31
USP44-205ENST00000549639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.46■■■□□ 2.31
USP44-205ENST00000549639 PIH1D3Q9NQM4 214 aaKnown RBP29.46■■■□□ 2.31
USP44-205ENST00000549639 HERC5Q9UII4 1024 aaKnown RBP29.45■■■□□ 2.31
USP44-205ENST00000549639 ZHX2Q9Y6X8 837 aa29.45■■■□□ 2.31
USP44-205ENST00000549639 FASTKD5Q7L8L6 764 aaKnown RBP29.44■■■□□ 2.3
USP44-205ENST00000549639 SIRT2Q8IXJ6 389 aa29.44■■■□□ 2.3
USP44-205ENST00000549639 IL1RAPL2Q9NP60 686 aa29.44■■■□□ 2.3
USP44-205ENST00000549639 PI4KBQ9UBF8 816 aa29.44■■■□□ 2.3
USP44-205ENST00000549639 PTPN22Q9Y2R2 807 aa29.44■■■□□ 2.3
USP44-205ENST00000549639 PDHXO00330 501 aa29.43■■■□□ 2.3
USP44-205ENST00000549639 KIF22Q14807 665 aa29.43■■■□□ 2.3
USP44-205ENST00000549639 AFG3L2Q9Y4W6 797 aa29.43■■■□□ 2.3
USP44-205ENST00000549639 A0A0G2JLL6 359 aaPredicted RBP29.42■■■□□ 2.3
USP44-205ENST00000549639 IDH1O75874 414 aaKnown RBP29.42■■■□□ 2.3
USP44-205ENST00000549639 SOX10P56693 466 aa29.42■■■□□ 2.3
USP44-205ENST00000549639 MAP3K12Q12852 859 aa29.42■■■□□ 2.3
USP44-205ENST00000549639 MOGSQ13724 837 aa29.42■■■□□ 2.3
USP44-205ENST00000549639 TTF1Q15361 905 aaPredicted RBP29.42■■■□□ 2.3
USP44-205ENST00000549639 PRRT2Q7Z6L0 340 aaPredicted RBP29.42■■■□□ 2.3
USP44-205ENST00000549639 ADGRA1Q86SQ6 560 aa29.42■■■□□ 2.3
USP44-205ENST00000549639 TBC1D2Q9BYX2 928 aa29.42■■■□□ 2.3
USP44-205ENST00000549639 DOCK1Q14185 1865 aa29.42■■■□□ 2.3
USP44-205ENST00000549639 GNRH1P01148 92 aa29.41■■■□□ 2.3
USP44-205ENST00000549639 CYP7A1P22680 504 aa29.41■■■□□ 2.3
USP44-205ENST00000549639 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.41■■■□□ 2.3
USP44-205ENST00000549639 IFIT2P09913 472 aaKnown RBP29.4■■■□□ 2.3
USP44-205ENST00000549639 TGFBRAP1Q8WUH2 860 aa29.4■■■□□ 2.3
USP44-205ENST00000549639 PARK7Q99497 189 aaKnown RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms