RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 SLC27A5Q9Y2P5 690 aa8.4□□□□□ -1.06
TMEM116-208ENST00000549537 TLL2Q9Y6L7 1015 aa8.4□□□□□ -1.06
TMEM116-208ENST00000549537 POLR2AP24928 1970 aaKnown RBP8.39□□□□□ -1.07
TMEM116-208ENST00000549537 CASP8AP2Q9UKL3 1982 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 ASTN2O75129 1339 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-208ENST00000549537 USP17L3A6NCW0 530 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 USP17L4A6NCW7 530 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 SNAP23O00161 211 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 DEFB115Q30KQ5 88 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 DLK2Q6UY11 383 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 CDC37L1Q7L3B6 337 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 USP17L1Q7RTZ2 530 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 USP48Q86UV5 1035 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 FAM160A2Q8N612 972 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-208ENST00000549537 ANKRD44Q8N8A2 993 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 SNIP1Q8TAD8 396 aaKnown RBP8.39□□□□□ -1.07
TMEM116-208ENST00000549537 ZNF594Q96JF6 807 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-208ENST00000549537 COA1Q9GZY4 146 aa8.39□□□□□ -1.07
TMEM116-208ENST00000549537 C9orf78Q9NZ63 289 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-208ENST00000549537 WDR33Q9C0J8 1336 aaKnown RBP8.38□□□□□ -1.07
TMEM116-208ENST00000549537 WNT7AO00755 349 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 TAF5LO75529 589 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 CELF2O95319 508 aaKnown RBP8.38□□□□□ -1.07
TMEM116-208ENST00000549537 CT47B1P0C2W7 299 aaPredicted RBP8.38□□□□□ -1.07
TMEM116-208ENST00000549537 KIF4BQ2VIQ3 1234 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 Q3C1V9 767 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 STRIP1Q5VSL9 837 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 BRICD5Q6PL45 260 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 SAPCD2Q86UD0 394 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
TMEM116-208ENST00000549537 MXD3Q9BW11 206 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 USP44Q9H0E7 712 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 SENP2Q9HC62 589 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 DACH1Q9UI36 760 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 ABT1Q9ULW3 272 aaKnown RBP8.38□□□□□ -1.07
TMEM116-208ENST00000549537 CHMP3Q9Y3E7 222 aa8.38□□□□□ -1.07
TMEM116-208ENST00000549537 ADM5C9JUS6 153 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 WIPF1O43516 503 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 USP17L8P0C7I0 530 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 IL1R1P14778 569 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 SCARF1Q14162 830 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 CCDC57Q2TAC2 916 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 CYP4F22Q6NT55 531 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 LDHAL6AQ6ZMR3 332 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 KRT26Q7Z3Y9 468 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 PARP9Q8IXQ6 854 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 KCTD17Q8N5Z5 321 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 HHIPL1Q96JK4 782 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 CAPNS2Q96L46 248 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
TMEM116-208ENST00000549537 PUS3Q9BZE2 481 aaKnown RBP8.37□□□□□ -1.07
TMEM116-208ENST00000549537 BICC1Q9H694 974 aaKnown RBP8.37□□□□□ -1.07
TMEM116-208ENST00000549537 CD209Q9NNX6 404 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 MYOZ2Q9NPC6 264 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 SMC4Q9NTJ3 1288 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 GGA3Q9NZ52 723 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 RIPOR2Q9Y4F9 1068 aa8.37□□□□□ -1.07
TMEM116-208ENST00000549537 MYO3BQ8WXR4 1341 aa8.36□□□□□ -1.07
TMEM116-208ENST00000549537 PITPNM2Q9BZ72 1349 aa8.36□□□□□ -1.07
TMEM116-208ENST00000549537 RGS19P49795 217 aa8.36□□□□□ -1.07
TMEM116-208ENST00000549537 RARSP54136 660 aaKnown RBP8.36□□□□□ -1.07
TMEM116-208ENST00000549537 TTLL5Q6EMB2 1281 aa8.36□□□□□ -1.07
TMEM116-208ENST00000549537 CERS5Q8N5B7 392 aa8.36□□□□□ -1.07
TMEM116-208ENST00000549537 IL27Q8NEV9 243 aa8.36□□□□□ -1.07
TMEM116-208ENST00000549537 DCPSQ96C86 337 aaKnown RBP8.36□□□□□ -1.07
TMEM116-208ENST00000549537 ZBED3Q96IU2 234 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-208ENST00000549537 ARAP2Q8WZ64 1704 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 WNT10BO00744 389 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 KCNJ4P48050 445 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 RFX5P48382 616 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-208ENST00000549537 CTCFP49711 727 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-208ENST00000549537 MMP14P50281 582 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 GTF2IP78347 998 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 NFX1Q12986 1120 aaKnown RBP8.35□□□□□ -1.07
TMEM116-208ENST00000549537 UBE4AQ14139 1066 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 NBPF9Q3BBW0 867 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 TAF7LQ5H9L4 462 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 ANGEL2Q5VTE6 544 aaKnown RBP8.35□□□□□ -1.07
TMEM116-208ENST00000549537 VGLL2Q8N8G2 317 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 CDCA5Q96FF9 252 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 ZNF408Q9H9D4 720 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 CNNM1Q9NRU3 951 aa8.35□□□□□ -1.07
TMEM116-208ENST00000549537 NOB1Q9ULX3 412 aaKnown RBP8.35□□□□□ -1.07
TMEM116-208ENST00000549537 ECM29Q5VYK3 1845 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 FAM155AB1AL88 458 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-208ENST00000549537 RAD21O60216 631 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 AOC2O75106 756 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 SASH1O94885 1247 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 HSPA8P11142 646 aaKnown RBP8.34□□□□□ -1.07
TMEM116-208ENST00000549537 MAP2K2P36507 400 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 ECE1P42892 770 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 LBX1P52954 281 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 FKBP1AP62942 108 aaKnown RBP8.34□□□□□ -1.07
TMEM116-208ENST00000549537 TTLL12Q14166 644 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-208ENST00000549537 LRRC24Q50LG9 513 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 DIEXFQ68CQ4 756 aaKnown RBP8.34□□□□□ -1.07
TMEM116-208ENST00000549537 ZNF804AQ7Z570 1209 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 TDRD7Q8NHU6 1098 aaKnown RBP8.34□□□□□ -1.07
TMEM116-208ENST00000549537 KLHDC4Q8TBB5 520 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 KIFC2Q96AC6 838 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms