RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CCDC69A6NI79 296 aa12.86□□□□□ -0.35
LINC00661-204ENST00000549354 TM4SF1P30408 202 aa12.86□□□□□ -0.35
LINC00661-204ENST00000549354 EXOSC10Q01780 885 aaKnown RBP12.86□□□□□ -0.35
LINC00661-204ENST00000549354 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
LINC00661-204ENST00000549354 PUS7LQ9H0K6 701 aaKnown RBP12.86□□□□□ -0.35
LINC00661-204ENST00000549354 GOLGA8BA8MQT2 603 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 RASGRF1Q13972 1273 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 PTPN14Q15678 1187 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 NFXL1Q6ZNB6 911 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 PLA2G4DQ86XP0 818 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
LINC00661-204ENST00000549354 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 MYO5AQ9Y4I1 1855 aaKnown RBP12.85□□□□□ -0.35
LINC00661-204ENST00000549354 KLF18A0A0U1RQI7 1052 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 RESTQ13127 1097 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 NBPF5PQ86XG9 351 aaPredicted RBP12.85□□□□□ -0.35
LINC00661-204ENST00000549354 LRRC8AQ8IWT6 810 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 NLRP3Q96P20 1036 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 MINPP1Q9UNW1 487 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
LINC00661-204ENST00000549354 ADD1P35611 737 aaKnown RBP12.85□□□□□ -0.35
LINC00661-204ENST00000549354 ELF2Q15723 593 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 CGNQ9P2M7 1197 aaKnown RBP12.85□□□□□ -0.35
LINC00661-204ENST00000549354 JAG2Q9Y219 1238 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 CLIC4Q9Y696 253 aa12.85□□□□□ -0.35
LINC00661-204ENST00000549354 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
LINC00661-204ENST00000549354 RFC4P35249 363 aa12.84□□□□□ -0.35
LINC00661-204ENST00000549354 BICDL1Q6ZP65 573 aa12.84□□□□□ -0.35
LINC00661-204ENST00000549354 BAZ2BQ9UIF8 2168 aaKnown RBP12.84□□□□□ -0.35
LINC00661-204ENST00000549354 ZMYM6O95789 1325 aa12.84□□□□□ -0.35
LINC00661-204ENST00000549354 PDE6AP16499 860 aa12.84□□□□□ -0.35
LINC00661-204ENST00000549354 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
LINC00661-204ENST00000549354 TMC6Q7Z403 805 aa12.84□□□□□ -0.35
LINC00661-204ENST00000549354 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
LINC00661-204ENST00000549354 ANKRD7Q92527 254 aa12.84□□□□□ -0.35
LINC00661-204ENST00000549354 TAF1P21675 1872 aa12.84□□□□□ -0.35
LINC00661-204ENST00000549354 SMTNL1A8MU46 457 aa12.83□□□□□ -0.35
LINC00661-204ENST00000549354 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.35
LINC00661-204ENST00000549354 TDRD7Q8NHU6 1098 aaKnown RBP12.83□□□□□ -0.35
LINC00661-204ENST00000549354 CFAP45Q9UL16 551 aa12.83□□□□□ -0.35
LINC00661-204ENST00000549354 ELP1O95163 1332 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 E7EWF7 191 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 GPAA1O43292 621 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
LINC00661-204ENST00000549354 ALX1Q15699 326 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 RALYLQ86SE5 291 aaKnown RBP12.83□□□□□ -0.36
LINC00661-204ENST00000549354 CELF1Q92879 486 aaKnown RBP12.83□□□□□ -0.36
LINC00661-204ENST00000549354 CLIC6Q96NY7 704 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 EPC1Q9H2F5 836 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 ORC3Q9UBD5 711 aaPredicted RBP12.83□□□□□ -0.36
LINC00661-204ENST00000549354 PDS5AQ29RF7 1337 aaKnown RBP12.83□□□□□ -0.36
LINC00661-204ENST00000549354 BCAMP50895 628 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 NFIXQ14938 502 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 SKIDA1Q1XH10 827 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 SYNE3Q6ZMZ3 975 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 NUP133Q8WUM0 1156 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 SENP2Q9HC62 589 aa12.83□□□□□ -0.36
LINC00661-204ENST00000549354 CTIFO43310 598 aaKnown RBP12.82□□□□□ -0.36
LINC00661-204ENST00000549354 FGAP02671 866 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
LINC00661-204ENST00000549354 EVCP57679 992 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 ZNF827Q17R98 1081 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 NKX2-3Q8TAU0 364 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 ZNF532Q9HCE3 1301 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 NDUFA8P51970 172 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 RBM6P78332 1123 aaKnown RBP12.82□□□□□ -0.36
LINC00661-204ENST00000549354 IQCB1Q15051 598 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 DPCR1Q3MIW9 517 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 ZNF772Q68DY9 489 aaPredicted RBP12.82□□□□□ -0.36
LINC00661-204ENST00000549354 LRRN4CLQ8ND94 238 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 C8orf76Q96K31 380 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 IFNKQ9P0W0 207 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 WDR19Q8NEZ3 1342 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 IRS2Q9Y4H2 1338 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 FBXO33Q7Z6M2 555 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
LINC00661-204ENST00000549354 CPLX3Q8WVH0 158 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 ANKRD2Q9GZV1 360 aa12.82□□□□□ -0.36
LINC00661-204ENST00000549354 SEMA3EO15041 775 aa12.81□□□□□ -0.36
LINC00661-204ENST00000549354 ATP1A3P13637 1013 aa12.81□□□□□ -0.36
LINC00661-204ENST00000549354 MAP3K12Q12852 859 aa12.81□□□□□ -0.36
LINC00661-204ENST00000549354 STX1AQ16623 288 aa12.81□□□□□ -0.36
LINC00661-204ENST00000549354 KLHL10Q6JEL2 608 aa12.81□□□□□ -0.36
LINC00661-204ENST00000549354 STRBPQ96SI9 672 aaKnown RBP12.81□□□□□ -0.36
LINC00661-204ENST00000549354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.81□□□□□ -0.36
LINC00661-204ENST00000549354 GYS1P13807 737 aa12.81□□□□□ -0.36
LINC00661-204ENST00000549354 PROM2Q8N271 834 aa12.81□□□□□ -0.36
LINC00661-204ENST00000549354 STAMQ92783 540 aa12.81□□□□□ -0.36
LINC00661-204ENST00000549354 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
LINC00661-204ENST00000549354 KMT5BQ4FZB7 885 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 SYT10Q6XYQ8 523 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 MIGA1Q8NAN2 632 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 EEF2KMTQ96G04 330 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 COL1A1P02452 1464 aaPredicted RBP12.8□□□□□ -0.36
LINC00661-204ENST00000549354 PNPLA7Q6ZV29 1317 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms