RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 DEFB132Q7Z7B7 95 aa13.4□□□□□ -0.26
VDR-206ENST00000549336 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
VDR-206ENST00000549336 DEXIO95424 95 aa13.4□□□□□ -0.26
VDR-206ENST00000549336 MCM4P33991 863 aa13.4□□□□□ -0.26
VDR-206ENST00000549336 IRX3P78415 501 aaPredicted RBP13.4□□□□□ -0.26
VDR-206ENST00000549336 CERKLQ49MI3 558 aaPredicted RBP13.4□□□□□ -0.26
VDR-206ENST00000549336 SYNE4Q8N205 404 aa13.4□□□□□ -0.26
VDR-206ENST00000549336 HSPA4P34932 840 aa13.4□□□□□ -0.26
VDR-206ENST00000549336 ZKSCAN3Q9BRR0 538 aa13.4□□□□□ -0.26
VDR-206ENST00000549336 CD209Q9NNX6 404 aa13.4□□□□□ -0.26
VDR-206ENST00000549336 HSPD1P10809 573 aaKnown RBP13.4□□□□□ -0.27
VDR-206ENST00000549336 ADD2P35612 726 aa13.4□□□□□ -0.27
VDR-206ENST00000549336 INTS5Q6P9B9 1019 aaKnown RBP13.4□□□□□ -0.27
VDR-206ENST00000549336 KCNG4Q8TDN1 519 aa13.4□□□□□ -0.27
VDR-206ENST00000549336 SUGT1Q9Y2Z0 365 aa13.4□□□□□ -0.27
VDR-206ENST00000549336 PXDNLA1KZ92 1463 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 MAP2P11137 1827 aaKnown RBP13.39□□□□□ -0.27
VDR-206ENST00000549336 TRIM75PA6NK02 468 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 SNX14Q9Y5W7 946 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 ZSCAN22P10073 491 aaPredicted RBP13.39□□□□□ -0.27
VDR-206ENST00000549336 KRT2P35908 639 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 RASGRF1Q13972 1273 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 BRAPQ7Z569 592 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 ATP6V0A2Q9Y487 856 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 ABCC12Q96J65 1359 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 FMN2Q9NZ56 1722 aa13.39□□□□□ -0.27
VDR-206ENST00000549336 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.39□□□□□ -0.27
VDR-206ENST00000549336 A0A0D9SFI3 127 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 NTSR2O95665 410 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 CTDSPL2Q05D32 466 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 MAP3K11Q16584 847 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 DNAI2Q9GZS0 605 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 IFT172Q9UG01 1749 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 FOXO4P98177 505 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 E7EWF7 191 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 FGFR1OPO95684 399 aaKnown RBP13.38□□□□□ -0.27
VDR-206ENST00000549336 PRKG1Q13976 671 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 MCTP2Q6DN12 878 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 SMARCE1Q969G3 411 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 CSRNP1Q96S65 589 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 DDX19AQ9NUU7 478 aaKnown RBP13.38□□□□□ -0.27
VDR-206ENST00000549336 SMTNL1A8MU46 457 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 ARMC9Q7Z3E5 817 aa13.38□□□□□ -0.27
VDR-206ENST00000549336 TLR7Q9NYK1 1049 aaKnown RBP13.38□□□□□ -0.27
VDR-206ENST00000549336 CSF1RP07333 972 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 SDR42E1Q8WUS8 393 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 RGS12O14924 1447 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
VDR-206ENST00000549336 COL3A1P02461 1466 aaPredicted RBP13.37□□□□□ -0.27
VDR-206ENST00000549336 FGAP02671 866 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 TRIM21P19474 475 aaKnown RBP13.37□□□□□ -0.27
VDR-206ENST00000549336 MATR3P43243 847 aaKnown RBP eCLIP13.37□□□□□ -0.27
VDR-206ENST00000549336 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 FOXP4Q8IVH2 680 aaPredicted RBP13.37□□□□□ -0.27
VDR-206ENST00000549336 CLIP2Q9UDT6 1046 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 SERPINB13Q9UIV8 391 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 PXDNQ92626 1479 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 IQCA1LA6NCM1 817 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 ECE2O60344 883 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 PDIA6Q15084 440 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 SYCP1Q15431 976 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 CNNM3Q8NE01 707 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 TSG101Q99816 390 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 TRIM5Q9C035 493 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 PI4KBQ9UBF8 816 aa13.37□□□□□ -0.27
VDR-206ENST00000549336 GSPT1P15170 499 aaKnown RBP13.36□□□□□ -0.27
VDR-206ENST00000549336 ABCB5Q2M3G0 1257 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 SMCR8Q8TEV9 937 aaPredicted RBP13.36□□□□□ -0.27
VDR-206ENST00000549336 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
VDR-206ENST00000549336 MRE11P49959 708 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 CHMP4BP1P59074 171 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 ICA1Q05084 483 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
VDR-206ENST00000549336 SIRT2Q8IXJ6 389 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 SLC5A4Q9NY91 659 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 RNF181Q9P0P0 153 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 CBFA2T2O43439 604 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 TOP1P11387 765 aaKnown RBP13.36□□□□□ -0.27
VDR-206ENST00000549336 GYS1P13807 737 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 FSIP1Q8NA03 581 aa13.36□□□□□ -0.27
VDR-206ENST00000549336 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
VDR-206ENST00000549336 USP14P54578 494 aa13.35□□□□□ -0.27
VDR-206ENST00000549336 ZNHIT6Q9NWK9 470 aaKnown RBP13.35□□□□□ -0.27
VDR-206ENST00000549336 CLRN2A0PK11 232 aa13.35□□□□□ -0.27
VDR-206ENST00000549336 SERPINC1P01008 464 aa13.35□□□□□ -0.27
VDR-206ENST00000549336 ARHGEF6Q15052 776 aa13.35□□□□□ -0.27
VDR-206ENST00000549336 ZYXQ15942 572 aaKnown RBP13.35□□□□□ -0.27
VDR-206ENST00000549336 GLIPR1L2Q4G1C9 344 aa13.35□□□□□ -0.27
VDR-206ENST00000549336 CT47A1Q5JQC4 288 aaPredicted RBP13.35□□□□□ -0.27
VDR-206ENST00000549336 GIMAP6Q6P9H5 292 aa13.35□□□□□ -0.27
VDR-206ENST00000549336 COL23A1Q86Y22 540 aaPredicted RBP13.35□□□□□ -0.27
VDR-206ENST00000549336 ZSCAN10Q96SZ4 725 aaPredicted RBP13.35□□□□□ -0.27
VDR-206ENST00000549336 ANO10Q9NW15 660 aa13.35□□□□□ -0.27
VDR-206ENST00000549336 ZNRF3Q9ULT6 936 aa13.35□□□□□ -0.27
VDR-206ENST00000549336 RIPOR2Q9Y4F9 1068 aa13.35□□□□□ -0.27
VDR-206ENST00000549336 MED1Q15648 1581 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms