RNA–Protein interactions for RNA: ENST00000549302.1

ARL1-206, Transcript of ADP ribosylation factor like GTPase 1, human

TSL 3

Gene ARL1, Length 725 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL1-206	ENST00000549302	EFCC1	Q9HA90	598 aa		12.26	□□□□□ -0.45
ARL1-206	ENST00000549302	VEZT	Q9HBM0	779 aa		12.26	□□□□□ -0.45
ARL1-206	ENST00000549302	CD209	Q9NNX6	404 aa		12.26	□□□□□ -0.45
ARL1-206	ENST00000549302	TAF1	P21675	1872 aa		12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	ANKRD18B	A2A2Z9	1011 aa		12.25	□□□□□ -0.45
ARL1-206	ENST00000549302		F8W031	263 aa	Predicted RBP	12.25	□□□□□ -0.45
ARL1-206	ENST00000549302		H7C1W4	665 aa		12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	WDHD1	O75717	1129 aa	Predicted RBP	12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	MAP3K11	Q16584	847 aa		12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	CFAP100	Q494V2	611 aa		12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	HABP4	Q5JVS0	413 aa	Known RBP	12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	ZNF804A	Q7Z570	1209 aa		12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	THAP11	Q96EK4	314 aa		12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	TNRC18	O15417	2968 aa	Predicted RBP	12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	COL4A1	P02462	1669 aa		12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	DDX60	Q8IY21	1712 aa	Known RBP	12.25	□□□□□ -0.45
ARL1-206	ENST00000549302	CLRN2	A0PK11	232 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	HOXA2	O43364	376 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	S1PR4	O95977	384 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	COL1A1	P02452	1464 aa	Predicted RBP	12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	KLRK1	P26718	216 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	CHRND	Q07001	517 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	TNFAIP1	Q13829	316 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	GCKR	Q14397	625 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	NBPF11	Q86T75	865 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	ANKRD13A	Q8IZ07	590 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	MTMR14	Q8NCE2	650 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	CD99L2	Q8TCZ2	262 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	ZBED3	Q96IU2	234 aa	Predicted RBP	12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	CLMN	Q96JQ2	1002 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	PLA2G12B	Q9BX93	195 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	AKAP11	Q9UKA4	1901 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	FZD1	Q9UP38	647 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	PTPN22	Q9Y2R2	807 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	CHMP3	Q9Y3E7	222 aa		12.24	□□□□□ -0.45
ARL1-206	ENST00000549302	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	FMNL1	O95466	1100 aa	Predicted RBP	12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	MS4A1	P11836	297 aa		12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	SP3	Q02447	781 aa		12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	CRHR2	Q13324	411 aa		12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	IFIT5	Q13325	482 aa	Known RBP	12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	TAF7L	Q5H9L4	462 aa		12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	BRICD5	Q6PL45	260 aa		12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	TSPYL6	Q8N831	410 aa		12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	HLA-C	Q95604	372 aa		12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	SLC6A16	Q9GZN6	736 aa		12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	SALL2	Q9Y467	1007 aa	Predicted RBP	12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	POLR2A	P24928	1970 aa	Known RBP	12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	SCN9A	Q15858	1988 aa		12.23	□□□□□ -0.45
ARL1-206	ENST00000549302	CSF1R	P07333	972 aa		12.22	□□□□□ -0.45
ARL1-206	ENST00000549302	FKBP1A	P62942	108 aa	Known RBP	12.22	□□□□□ -0.45
ARL1-206	ENST00000549302	FKBP5	Q13451	457 aa	Predicted RBP	12.22	□□□□□ -0.45
ARL1-206	ENST00000549302	RASA3	Q14644	834 aa		12.22	□□□□□ -0.45
ARL1-206	ENST00000549302	TWISTNB	Q3B726	338 aa	Predicted RBP	12.22	□□□□□ -0.45
ARL1-206	ENST00000549302		Q3C1V9	767 aa		12.22	□□□□□ -0.45
ARL1-206	ENST00000549302	RNF223	E7ERA6	249 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	TAF5L	O75529	589 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	EN2	P19622	333 aa	Predicted RBP	12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	FLII	Q13045	1269 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	SLC4A8	Q2Y0W8	1093 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	C15orf52	Q6ZUT6	534 aa	Known RBP	12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	CERS5	Q8N5B7	392 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	HELB	Q8NG08	1087 aa	Predicted RBP	12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	LINS1	Q8NG48	757 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	SPIRE2	Q8WWL2	714 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	DNAAF4	Q8WXU2	420 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	TSR2	Q969E8	191 aa	Known RBP	12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	ARMC5	Q96C12	935 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	ELP3	Q9H9T3	547 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	ZFYVE28	Q9HCC9	887 aa		12.21	□□□□□ -0.45
ARL1-206	ENST00000549302	PLIN1	O60240	522 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	USP2	O75604	605 aa	Predicted RBP	12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	IL1R1	P14778	569 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	TNNI2	P48788	182 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	KIF22	Q14807	665 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	CCDC57	Q2TAC2	916 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	SLC9C1	Q4G0N8	1177 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	RNF19B	Q6ZMZ0	732 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	OPTN	Q96CV9	577 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	PRMT6	Q96LA8	375 aa	Predicted RBP	12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	JAG2	Q9Y219	1238 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	CSAD	Q9Y600	493 aa		12.2	□□□□□ -0.46
ARL1-206	ENST00000549302	GTF2A2	P52657	109 aa		12.19	□□□□□ -0.46
ARL1-206	ENST00000549302	GUCA2A	Q02747	115 aa		12.19	□□□□□ -0.46
ARL1-206	ENST00000549302	TAF1C	Q15572	869 aa	Predicted RBP	12.19	□□□□□ -0.46
ARL1-206	ENST00000549302	LDHAL6A	Q6ZMR3	332 aa		12.19	□□□□□ -0.46
ARL1-206	ENST00000549302	G2E3	Q7L622	706 aa		12.19	□□□□□ -0.46
ARL1-206	ENST00000549302	FAM160A2	Q8N612	972 aa	Predicted RBP	12.19	□□□□□ -0.46
ARL1-206	ENST00000549302	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.19	□□□□□ -0.46
ARL1-206	ENST00000549302	CNNM1	Q9NRU3	951 aa		12.19	□□□□□ -0.46
ARL1-206	ENST00000549302	PCDHAC2	Q9Y5I4	1007 aa		12.19	□□□□□ -0.46
ARL1-206	ENST00000549302	CCL15-CCL14	A0A0B4J2E2	113 aa		12.18	□□□□□ -0.46
ARL1-206	ENST00000549302	SNAP23	O00161	211 aa		12.18	□□□□□ -0.46
ARL1-206	ENST00000549302	GJA5	P36382	358 aa		12.18	□□□□□ -0.46
ARL1-206	ENST00000549302	CCL15	Q16663	113 aa		12.18	□□□□□ -0.46
ARL1-206	ENST00000549302	MFSD14B	Q5SR56	506 aa		12.18	□□□□□ -0.46
ARL1-206	ENST00000549302	PRKD2	Q9BZL6	878 aa		12.18	□□□□□ -0.46
ARL1-206	ENST00000549302	ZNF70	Q9UC06	446 aa	Predicted RBP	12.18	□□□□□ -0.46
ARL1-206	ENST00000549302	SERPINA10	Q9UK55	444 aa		12.18	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms