RNA–Protein interactions for RNA: ENST00000549038.5

RNF41-206, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-206ENST00000549038 DCP1AQ9NPI6 582 aaPredicted RBP12.35□□□□□ -0.43
RNF41-206ENST00000549038 SERPINA10Q9UK55 444 aa12.35□□□□□ -0.43
RNF41-206ENST00000549038 HDAC9Q9UKV0 1011 aa12.35□□□□□ -0.43
RNF41-206ENST00000549038 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
RNF41-206ENST00000549038 FZD9O00144 591 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 LMNB1P20700 586 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 PRELPP51888 382 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 RBM5P52756 815 aaKnown RBP eCLIP12.34□□□□□ -0.43
RNF41-206ENST00000549038 RHBDL3P58872 404 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 APOBEC3HQ6NTF7 200 aaKnown RBP12.34□□□□□ -0.43
RNF41-206ENST00000549038 Q6ZUG5 572 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 TEX11Q8IYF3 940 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 OGFOD1Q8N543 542 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 TGFBRAP1Q8WUH2 860 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 USP40Q9NVE5 1235 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 CHMP5Q9NZZ3 219 aa12.34□□□□□ -0.43
RNF41-206ENST00000549038 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
RNF41-206ENST00000549038 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 USP17L21D6R901 530 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 PRC1O43663 620 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 USP17L8P0C7I0 530 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 MMP14P50281 582 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 CTR9Q6PD62 1173 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 NOL8Q76FK4 1167 aaKnown RBP12.33□□□□□ -0.44
RNF41-206ENST00000549038 TBC1D10CQ8IV04 446 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 MB21D2Q8IYB1 491 aaPredicted RBP12.33□□□□□ -0.44
RNF41-206ENST00000549038 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 MTA3Q9BTC8 594 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 SLKQ9H2G2 1235 aaPredicted RBP12.33□□□□□ -0.44
RNF41-206ENST00000549038 MCM9Q9NXL9 1143 aa12.33□□□□□ -0.44
RNF41-206ENST00000549038 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
RNF41-206ENST00000549038 ZBTB12Q9Y330 459 aaPredicted RBP12.33□□□□□ -0.44
RNF41-206ENST00000549038 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.33□□□□□ -0.44
RNF41-206ENST00000549038 COL4A5P29400 1685 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 YBX3P16989 372 aaKnown RBP eCLIP12.32□□□□□ -0.443e-9■■■■■ 29.8
RNF41-206ENST00000549038 RPS12P25398 132 aaKnown RBP12.32□□□□□ -0.44
RNF41-206ENST00000549038 CTDSPL2Q05D32 466 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 PDE4BQ07343 736 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 TOB2Q14106 344 aaPredicted RBP12.32□□□□□ -0.44
RNF41-206ENST00000549038 SART3Q15020 963 aaKnown RBP12.32□□□□□ -0.44
RNF41-206ENST00000549038 CFAP100Q494V2 611 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 MAPKAPK5Q8IW41 473 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 TMEM87BQ96K49 555 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 ZNF287Q9HBT7 754 aa12.32□□□□□ -0.44
RNF41-206ENST00000549038 FER1L6Q2WGJ9 1857 aa12.31□□□□□ -0.44
RNF41-206ENST00000549038 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
RNF41-206ENST00000549038 GPR162Q16538 588 aa12.31□□□□□ -0.44
RNF41-206ENST00000549038 ESR2Q92731 530 aa12.31□□□□□ -0.44
RNF41-206ENST00000549038 BRF1Q92994 677 aa12.31□□□□□ -0.44
RNF41-206ENST00000549038 TCEANC2Q96MN5 208 aa12.31□□□□□ -0.44
RNF41-206ENST00000549038 TOMM22Q9NS69 142 aa12.31□□□□□ -0.44
RNF41-206ENST00000549038 TPCN1Q9ULQ1 816 aa12.31□□□□□ -0.44
RNF41-206ENST00000549038 CCDC88AQ3V6T2 1871 aa12.31□□□□□ -0.44
RNF41-206ENST00000549038 SCN9AQ15858 1988 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 CYP2D7A0A087X1C5 515 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 ERICH2A1L162 156 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 B4E1Z4 1266 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 ORC4O43929 436 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 WDHD1O75717 1129 aaPredicted RBP12.3□□□□□ -0.44
RNF41-206ENST00000549038 FGRP09769 529 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 DLGAP5Q15398 846 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 TMTC2Q8N394 836 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 MTMR14Q8NCE2 650 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 DPF2Q92785 391 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 ZNF274Q96GC6 653 aaPredicted RBP12.3□□□□□ -0.44
RNF41-206ENST00000549038 PRMT6Q96LA8 375 aaPredicted RBP12.3□□□□□ -0.44
RNF41-206ENST00000549038 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 PCDHAC2Q9Y5I4 1007 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 GJA3Q9Y6H8 435 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 NEDD4P46934 1319 aa12.3□□□□□ -0.44
RNF41-206ENST00000549038 GRIN3BO60391 1043 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 KDM4AO75164 1064 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
RNF41-206ENST00000549038 CYP2D6P10635 497 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
RNF41-206ENST00000549038 DDIT3P35638 169 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 EVCP57679 992 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 NUCB2P80303 420 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 PICALMQ13492 652 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 COL9A3Q14050 684 aaPredicted RBP12.29□□□□□ -0.44
RNF41-206ENST00000549038 ME3Q16798 604 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 RRP12Q5JTH9 1297 aaKnown RBP12.29□□□□□ -0.44
RNF41-206ENST00000549038 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 IDI2Q9BXS1 227 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 INCENPQ9NQS7 918 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 SAP30BPQ9UHR5 308 aaKnown RBP12.29□□□□□ -0.44
RNF41-206ENST00000549038 ANGEL1Q9UNK9 670 aaKnown RBP12.29□□□□□ -0.44
RNF41-206ENST00000549038 ARFGEF1Q9Y6D6 1849 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 FLT1P17948 1338 aa12.29□□□□□ -0.44
RNF41-206ENST00000549038 TIAM2Q8IVF5 1701 aa12.28□□□□□ -0.44
RNF41-206ENST00000549038 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
RNF41-206ENST00000549038 SH2B2O14492 632 aaPredicted RBP12.28□□□□□ -0.44
RNF41-206ENST00000549038 IFIT3O14879 490 aaKnown RBP12.28□□□□□ -0.44
RNF41-206ENST00000549038 PFKFB2O60825 505 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms