RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 OSBPL3Q9H4L5 887 aa11.6□□□□□ -0.55
RAB5B-205ENST00000549034 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
RAB5B-205ENST00000549034 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
RAB5B-205ENST00000549034 CNTNAP1P78357 1384 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 TCRBV5S4A2TA0A5A2 114 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 UBE2Q2LH0YL09 131 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 PPP1R12BO60237 982 aaPredicted RBP11.59□□□□□ -0.55
RAB5B-205ENST00000549034 ENTPD3O75355 529 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 WDHD1O75717 1129 aaPredicted RBP11.59□□□□□ -0.55
RAB5B-205ENST00000549034 CHGBP05060 677 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 USP5P45974 858 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 UBE3CQ15386 1083 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 PAXIP1Q6ZW49 1069 aaPredicted RBP11.59□□□□□ -0.55
RAB5B-205ENST00000549034 MOB2Q70IA6 237 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 ARMC9Q7Z3E5 817 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 DDX4Q9NQI0 724 aaKnown RBP11.59□□□□□ -0.55
RAB5B-205ENST00000549034 ANGEL1Q9UNK9 670 aaKnown RBP11.59□□□□□ -0.55
RAB5B-205ENST00000549034 FZD1Q9UP38 647 aa11.59□□□□□ -0.55
RAB5B-205ENST00000549034 DOCK2Q92608 1830 aa11.58□□□□□ -0.56
RAB5B-205ENST00000549034 USP2O75604 605 aaPredicted RBP11.58□□□□□ -0.56
RAB5B-205ENST00000549034 ZFYP08048 801 aaPredicted RBP11.58□□□□□ -0.56
RAB5B-205ENST00000549034 HUNKP57058 714 aa11.58□□□□□ -0.56
RAB5B-205ENST00000549034 MIGA2Q7L4E1 593 aa11.58□□□□□ -0.56
RAB5B-205ENST00000549034 MAPKAPK5Q8IW41 473 aa11.58□□□□□ -0.56
RAB5B-205ENST00000549034 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
RAB5B-205ENST00000549034 TEPSINQ96N21 525 aa11.58□□□□□ -0.56
RAB5B-205ENST00000549034 ARMT1Q9H993 441 aa11.58□□□□□ -0.56
RAB5B-205ENST00000549034 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
RAB5B-205ENST00000549034 TLL2Q9Y6L7 1015 aa11.58□□□□□ -0.56
RAB5B-205ENST00000549034 MYH7P12883 1935 aa11.58□□□□□ -0.56
RAB5B-205ENST00000549034 DDTLA6NHG4 134 aaPredicted RBP11.57□□□□□ -0.56
RAB5B-205ENST00000549034 FKBP1BP68106 108 aa11.57□□□□□ -0.56
RAB5B-205ENST00000549034 GRM1Q13255 1194 aa11.57□□□□□ -0.56
RAB5B-205ENST00000549034 SAPCD2Q86UD0 394 aa11.57□□□□□ -0.56
RAB5B-205ENST00000549034 CERS3Q8IU89 383 aa11.57□□□□□ -0.56
RAB5B-205ENST00000549034 AIDAQ96BJ3 306 aa11.57□□□□□ -0.56
RAB5B-205ENST00000549034 HOOK2Q96ED9 719 aa11.57□□□□□ -0.56
RAB5B-205ENST00000549034 RIOK1Q9BRS2 568 aaKnown RBP11.57□□□□□ -0.56
RAB5B-205ENST00000549034 CRNKL1Q9BZJ0 848 aaKnown RBP11.57□□□□□ -0.56
RAB5B-205ENST00000549034 PUS7LQ9H0K6 701 aaKnown RBP11.57□□□□□ -0.56
RAB5B-205ENST00000549034 MBD4O95243 580 aa11.56□□□□□ -0.56
RAB5B-205ENST00000549034 IREB2P48200 963 aaKnown RBP11.56□□□□□ -0.56
RAB5B-205ENST00000549034 DCAF15Q66K64 600 aa11.56□□□□□ -0.56
RAB5B-205ENST00000549034 SH3BP5LQ7L8J4 393 aa11.56□□□□□ -0.56
RAB5B-205ENST00000549034 SKAP1Q86WV1 359 aa11.56□□□□□ -0.56
RAB5B-205ENST00000549034 LCORLQ8N3X6 602 aa11.56□□□□□ -0.56
RAB5B-205ENST00000549034 APPBP2Q92624 585 aa11.56□□□□□ -0.56
RAB5B-205ENST00000549034 CSRNP1Q96S65 589 aa11.56□□□□□ -0.56
RAB5B-205ENST00000549034 OSBPL5Q9H0X9 879 aaPredicted RBP11.56□□□□□ -0.56
RAB5B-205ENST00000549034 SAP30BPQ9UHR5 308 aaKnown RBP11.56□□□□□ -0.56
RAB5B-205ENST00000549034 MAST2Q6P0Q8 1798 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 PRKAB2O43741 272 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 ZNF157P51786 506 aaPredicted RBP11.55□□□□□ -0.56
RAB5B-205ENST00000549034 SLC4A8Q2Y0W8 1093 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 TTC22Q5TAA0 569 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 CYP4F22Q6NT55 531 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 RGMBQ6NW40 437 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 SDR42E1Q8WUS8 393 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 OSBP2Q969R2 916 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 SLC10A4Q96EP9 437 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 PALD1Q9ULE6 856 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 SLC4A4Q9Y6R1 1079 aa11.55□□□□□ -0.56
RAB5B-205ENST00000549034 RASSF10A6NK89 507 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 APPP05067 770 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 POLR3DP05423 398 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-205ENST00000549034 SDSP20132 328 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 MAP3K9P80192 1104 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 MAP3K11Q16584 847 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 ZMYM1Q5SVZ6 1142 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 FOXP4Q8IVH2 680 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-205ENST00000549034 DNAJC5GQ8N7S2 189 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 STRBPQ96SI9 672 aaKnown RBP11.54□□□□□ -0.56
RAB5B-205ENST00000549034 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
RAB5B-205ENST00000549034 ZNF341Q9BYN7 854 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 DHX36Q9H2U1 1008 aaKnown RBP11.54□□□□□ -0.56
RAB5B-205ENST00000549034 PI4KBQ9UBF8 816 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 MYH1P12882 1939 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 FLT1P17948 1338 aa11.54□□□□□ -0.56
RAB5B-205ENST00000549034 CDK5RAP2Q96SN8 1893 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 M0R2C6 588 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 GPAA1O43292 621 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 HLA-DOAP06340 250 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 ECE1P42892 770 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 VEGFBP49765 207 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 MCMDC2Q4G0Z9 681 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 LDLRAD1Q5T700 205 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 TTC6Q86TZ1 520 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 ANKRD13AQ8IZ07 590 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 CCDC102AQ96A19 550 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 KLRG1Q96E93 195 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 HHIPL1Q96JK4 782 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 TRIM34Q9BYJ4 488 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.53□□□□□ -0.56
RAB5B-205ENST00000549034 HELLSQ9NRZ9 838 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 MCM9Q9NXL9 1143 aa11.53□□□□□ -0.56
RAB5B-205ENST00000549034 WDR33Q9C0J8 1336 aaKnown RBP11.53□□□□□ -0.56
RAB5B-205ENST00000549034 PATL2C9JE40 543 aaKnown RBP11.52□□□□□ -0.57
RAB5B-205ENST00000549034 TBC1D12O60347 775 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms