RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 ZSCAN29Q8IWY8 852 aaPredicted RBP13.96□□□□□ -0.17
BEST3-209ENST00000548658 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.96□□□□□ -0.17
BEST3-209ENST00000548658 ZKSCAN4Q969J2 545 aaPredicted RBP13.96□□□□□ -0.17
BEST3-209ENST00000548658 NSUN4Q96CB9 384 aaKnown RBP13.96□□□□□ -0.17
BEST3-209ENST00000548658 NOL10Q9BSC4 688 aaKnown RBP13.96□□□□□ -0.17
BEST3-209ENST00000548658 ZCCHC17Q9NP64 241 aaKnown RBP13.96□□□□□ -0.17
BEST3-209ENST00000548658 ZNF112Q9UJU3 913 aa13.96□□□□□ -0.17
BEST3-209ENST00000548658 SNCAIPQ9Y6H5 919 aa13.96□□□□□ -0.17
BEST3-209ENST00000548658 AK9Q5TCS8 1911 aa13.96□□□□□ -0.18
BEST3-209ENST00000548658 CCL15-CCL14A0A0B4J2E2 113 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 BAG3O95817 575 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 PPIL2Q13356 520 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 CCL15Q16663 113 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 PI16Q6UXB8 463 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 TBC1D9Q6ZT07 1266 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 PTPN18Q99952 460 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 DBNDD2Q9BQY9 259 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 LAMB1P07942 1786 aa13.95□□□□□ -0.18
BEST3-209ENST00000548658 IRF6O14896 467 aa13.94□□□□□ -0.18
BEST3-209ENST00000548658 PLCG2P16885 1265 aa13.94□□□□□ -0.18
BEST3-209ENST00000548658 CRHR2Q13324 411 aa13.94□□□□□ -0.18
BEST3-209ENST00000548658 NOL9Q5SY16 702 aaKnown RBP13.94□□□□□ -0.18
BEST3-209ENST00000548658 TMED8Q6PL24 325 aaPredicted RBP13.94□□□□□ -0.18
BEST3-209ENST00000548658 ERO1AQ96HE7 468 aa13.94□□□□□ -0.18
BEST3-209ENST00000548658 R3HDMLQ9H3Y0 253 aa13.94□□□□□ -0.18
BEST3-209ENST00000548658 ZFYVE28Q9HCC9 887 aa13.94□□□□□ -0.18
BEST3-209ENST00000548658 OTOFQ9HC10 1997 aa13.94□□□□□ -0.18
BEST3-209ENST00000548658 INPP5BP32019 993 aa13.93□□□□□ -0.18
BEST3-209ENST00000548658 RGS19P49795 217 aa13.93□□□□□ -0.18
BEST3-209ENST00000548658 MAP3K10Q02779 954 aa13.93□□□□□ -0.18
BEST3-209ENST00000548658 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
BEST3-209ENST00000548658 NAA16Q6N069 864 aaPredicted RBP13.93□□□□□ -0.18
BEST3-209ENST00000548658 FBXO46Q6PJ61 603 aaPredicted RBP13.93□□□□□ -0.18
BEST3-209ENST00000548658 BRI3BPQ8WY22 251 aa13.93□□□□□ -0.18
BEST3-209ENST00000548658 EAF2Q96CJ1 260 aaPredicted RBP13.93□□□□□ -0.18
BEST3-209ENST00000548658 ZBTB40Q9NUA8 1239 aa13.93□□□□□ -0.18
BEST3-209ENST00000548658 DBNLQ9UJU6 430 aaKnown RBP13.93□□□□□ -0.18
BEST3-209ENST00000548658 COG6Q9Y2V7 657 aa13.93□□□□□ -0.18
BEST3-209ENST00000548658 TBC1D12O60347 775 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 RHBDL3P58872 404 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 SP3Q02447 781 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 PICALMQ13492 652 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 TAF1CQ15572 869 aaPredicted RBP13.92□□□□□ -0.18
BEST3-209ENST00000548658 CERS3Q8IU89 383 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 ZFPM1Q8IX07 1006 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 CLASRPQ8N2M8 674 aaKnown RBP13.92□□□□□ -0.18
BEST3-209ENST00000548658 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 CCDC8Q9H0W5 538 aaPredicted RBP13.92□□□□□ -0.18
BEST3-209ENST00000548658 PICK1Q9NRD5 415 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 SNRKQ9NRH2 765 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 RFX7Q2KHR2 1363 aa13.92□□□□□ -0.18
BEST3-209ENST00000548658 CXCL11O14625 94 aa13.91□□□□□ -0.18
BEST3-209ENST00000548658 CTNND1O60716 968 aaKnown RBP13.91□□□□□ -0.18
BEST3-209ENST00000548658 CYP2E1P05181 493 aaPredicted RBP13.91□□□□□ -0.18
BEST3-209ENST00000548658 PPP4CP60510 307 aa13.91□□□□□ -0.18
BEST3-209ENST00000548658 AACSQ86V21 672 aa13.91□□□□□ -0.18
BEST3-209ENST00000548658 SCYL3Q8IZE3 742 aa13.91□□□□□ -0.18
BEST3-209ENST00000548658 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
BEST3-209ENST00000548658 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
BEST3-209ENST00000548658 DHX36Q9H2U1 1008 aaKnown RBP13.91□□□□□ -0.18
BEST3-209ENST00000548658 HPS5Q9UPZ3 1129 aa13.91□□□□□ -0.18
BEST3-209ENST00000548658 KCNH4Q9UQ05 1017 aa13.91□□□□□ -0.18
BEST3-209ENST00000548658 ATRNL1Q5VV63 1379 aa13.91□□□□□ -0.18
BEST3-209ENST00000548658 DDTLA6NHG4 134 aaPredicted RBP13.9□□□□□ -0.18
BEST3-209ENST00000548658 PHF20L1A8MW92 1017 aa13.9□□□□□ -0.18
BEST3-209ENST00000548658 RAB11FIP3O75154 756 aa13.9□□□□□ -0.18
BEST3-209ENST00000548658 MLLT1Q03111 559 aaPredicted RBP13.9□□□□□ -0.18
BEST3-209ENST00000548658 SH3BP5LQ7L8J4 393 aa13.9□□□□□ -0.18
BEST3-209ENST00000548658 TEX11Q8IYF3 940 aa13.9□□□□□ -0.18
BEST3-209ENST00000548658 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
BEST3-209ENST00000548658 DDX4Q9NQI0 724 aaKnown RBP13.9□□□□□ -0.18
BEST3-209ENST00000548658 TRIM17Q9Y577 477 aa13.9□□□□□ -0.18
BEST3-209ENST00000548658 COL2A1P02458 1487 aaPredicted RBP13.89□□□□□ -0.19
BEST3-209ENST00000548658 BTBD19C9JJ37 291 aa13.89□□□□□ -0.19
BEST3-209ENST00000548658 TLR2O60603 784 aa13.89□□□□□ -0.19
BEST3-209ENST00000548658 ZAP70P43403 619 aa13.89□□□□□ -0.19
BEST3-209ENST00000548658 MAP3K12Q12852 859 aa13.89□□□□□ -0.19
BEST3-209ENST00000548658 FASTKD5Q7L8L6 764 aaKnown RBP13.89□□□□□ -0.19
BEST3-209ENST00000548658 ANKRD23Q86SG2 305 aa13.89□□□□□ -0.19
BEST3-209ENST00000548658 OSBPL5Q9H0X9 879 aaPredicted RBP13.89□□□□□ -0.19
BEST3-209ENST00000548658 EFCC1Q9HA90 598 aa13.89□□□□□ -0.19
BEST3-209ENST00000548658 AATFQ9NY61 560 aaKnown RBP eCLIP13.89□□□□□ -0.19
BEST3-209ENST00000548658 PI4KBQ9UBF8 816 aa13.89□□□□□ -0.19
BEST3-209ENST00000548658 HERC5Q9UII4 1024 aaKnown RBP13.89□□□□□ -0.19
BEST3-209ENST00000548658 ZHX2Q9Y6X8 837 aa13.89□□□□□ -0.19
BEST3-209ENST00000548658 IDH1O75874 414 aaKnown RBP13.88□□□□□ -0.19
BEST3-209ENST00000548658 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
BEST3-209ENST00000548658 PTPRAP18433 802 aa13.88□□□□□ -0.19
BEST3-209ENST00000548658 KIF22Q14807 665 aa13.88□□□□□ -0.19
BEST3-209ENST00000548658 TTF1Q15361 905 aaPredicted RBP13.88□□□□□ -0.19
BEST3-209ENST00000548658 OTOP1Q7RTM1 612 aa13.88□□□□□ -0.19
BEST3-209ENST00000548658 TBC1D2Q9BYX2 928 aa13.88□□□□□ -0.19
BEST3-209ENST00000548658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.88□□□□□ -0.19
BEST3-209ENST00000548658 TLR7Q9NYK1 1049 aaKnown RBP13.88□□□□□ -0.19
BEST3-209ENST00000548658 GNRH1P01148 92 aa13.87□□□□□ -0.19
BEST3-209ENST00000548658 FOXP4Q8IVH2 680 aaPredicted RBP13.87□□□□□ -0.19
BEST3-209ENST00000548658 CD99L2Q8TCZ2 262 aa13.87□□□□□ -0.19
BEST3-209ENST00000548658 SH3RF3Q8TEJ3 882 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms