RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 NUCB2P80303 420 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 CTDSPL2Q05D32 466 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 SART3Q15020 963 aaKnown RBP14.59□□□□□ -0.07
RAB5B-204ENST00000548068 CTR9Q6PD62 1173 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 BRF1Q92994 677 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 TCEANC2Q96MN5 208 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 TPCN1Q9ULQ1 816 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 NEDD4P46934 1319 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 LTBP3Q9NS15 1303 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 ROBO3Q96MS0 1386 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 USP17L12C9JPN9 530 aa14.58□□□□□ -0.08
RAB5B-204ENST00000548068 USP17L21D6R901 530 aa14.58□□□□□ -0.08
RAB5B-204ENST00000548068 PDE4BQ07343 736 aa14.58□□□□□ -0.08
RAB5B-204ENST00000548068 ESR2Q92731 530 aa14.58□□□□□ -0.08
RAB5B-204ENST00000548068 ZNF274Q96GC6 653 aaPredicted RBP14.58□□□□□ -0.08
RAB5B-204ENST00000548068 ZNF277Q9NRM2 450 aaPredicted RBP14.58□□□□□ -0.08
RAB5B-204ENST00000548068 TOMM22Q9NS69 142 aa14.58□□□□□ -0.08
RAB5B-204ENST00000548068 MCM9Q9NXL9 1143 aa14.58□□□□□ -0.08
RAB5B-204ENST00000548068 ERICH2A1L162 156 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 B4E1Z4 1266 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 F8W031 263 aaPredicted RBP14.57□□□□□ -0.08
RAB5B-204ENST00000548068 PDIA4P13667 645 aaKnown RBP14.57□□□□□ -0.08
RAB5B-204ENST00000548068 ME3Q16798 604 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 CCDC83Q8IWF9 413 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 TGFBRAP1Q8WUH2 860 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 JDP2Q8WYK2 163 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 ZDHHC15Q96MV8 337 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 ZNF287Q9HBT7 754 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 MKRN1Q9UHC7 482 aaKnown RBP14.57□□□□□ -0.08
RAB5B-204ENST00000548068 SERPINA10Q9UK55 444 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 ZNRF3Q9ULT6 936 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 ANGEL1Q9UNK9 670 aaKnown RBP14.57□□□□□ -0.08
RAB5B-204ENST00000548068 SMC3Q9UQE7 1217 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 BCS1LQ9Y276 419 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
RAB5B-204ENST00000548068 ORC4O43929 436 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 PFKFB2O60825 505 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 KDM4AO75164 1064 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 LARGE1O95461 756 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 FGRP09769 529 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 CRKP46108 304 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 EVCP57679 992 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 ANTXR2P58335 489 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 RHBDL3P58872 404 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 GTF3C6Q969F1 213 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 LRRC2Q9BYS8 371 aa14.56□□□□□ -0.08
RAB5B-204ENST00000548068 YDJCA8MPS7 323 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 SH2B2O14492 632 aaPredicted RBP14.55□□□□□ -0.08
RAB5B-204ENST00000548068 POLR3DP05423 398 aaPredicted RBP14.55□□□□□ -0.08
RAB5B-204ENST00000548068 LIFRP42702 1097 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 MMP14P50281 582 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 SCNN1DP51172 638 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 APOBRQ0VD83 1088 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 COL9A3Q14050 684 aaPredicted RBP14.55□□□□□ -0.08
RAB5B-204ENST00000548068 RRP12Q5JTH9 1297 aaKnown RBP14.55□□□□□ -0.08
RAB5B-204ENST00000548068 C12orf60Q5U649 245 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 RSBN1LQ6PCB5 846 aaPredicted RBP14.55□□□□□ -0.08
RAB5B-204ENST00000548068 KIAA0825Q8IV33 1275 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 TMTC2Q8N394 836 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 LARP6Q9BRS8 491 aaKnown RBP14.55□□□□□ -0.08
RAB5B-204ENST00000548068 LLPHQ9BRT6 129 aaKnown RBP14.55□□□□□ -0.08
RAB5B-204ENST00000548068 UBAC1Q9BSL1 405 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 MXD3Q9BW11 206 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 KCNQ5Q9NR82 932 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 HDAC9Q9UKV0 1011 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 KIF3AQ9Y496 699 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 FLT1P17948 1338 aa14.55□□□□□ -0.08
RAB5B-204ENST00000548068 IFIT3O14879 490 aaKnown RBP14.54□□□□□ -0.08
RAB5B-204ENST00000548068 DHX16O60231 1041 aaKnown RBP14.54□□□□□ -0.08
RAB5B-204ENST00000548068 VIL1P09327 827 aaKnown RBP14.54□□□□□ -0.08
RAB5B-204ENST00000548068 RAB3GAP1Q15042 981 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 TMEM67Q5HYA8 995 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 CYB5R4Q7L1T6 521 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 CHST3Q7LGC8 479 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 IQCA1Q86XH1 822 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 MAPKAPK5Q8IW41 473 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 AGBL3Q8NEM8 1001 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 USP40Q9NVE5 1235 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 TAOK2Q9UL54 1235 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 NAP1L2Q9ULW6 460 aaPredicted RBP14.54□□□□□ -0.08
RAB5B-204ENST00000548068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.54□□□□□ -0.08
RAB5B-204ENST00000548068 COL4A5P29400 1685 aa14.54□□□□□ -0.08
RAB5B-204ENST00000548068 CYP2D7A0A087X1C5 515 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 KLF18A0A0U1RQI7 1052 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 GOLGA8BA8MQT2 603 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 NFKBIEO00221 500 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 USP17L8P0C7I0 530 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 PDCP20941 246 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 RBM5P52756 815 aaKnown RBP eCLIP14.53□□□□□ -0.08
RAB5B-204ENST00000548068 STK3Q13188 491 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 TNIP1Q15025 636 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 CCDC178Q5BJE1 867 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 SYNE3Q6ZMZ3 975 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 NFXL1Q6ZNB6 911 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 TTC6Q86TZ1 520 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 SGMS1Q86VZ5 419 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 OGFOD1Q8N543 542 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 NECAB1Q8N987 351 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 ZSWIM5Q9P217 1185 aa14.53□□□□□ -0.08
RAB5B-204ENST00000548068 MYH8P13535 1937 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms