RNA–Protein interactions for RNA: ENST00000547939.5

TUBA1A-204, Transcript of tubulin alpha 1a, human

TSL 3

Gene TUBA1A, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-204	ENST00000547939	FPGT-TNNI3K	V9GXZ4	949 aa		12.86	□□□□□ -0.35
TUBA1A-204	ENST00000547939	OTOF	Q9HC10	1997 aa		12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	SOX1	O00570	391 aa	Predicted RBP	12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	ENTPD3	O75355	529 aa		12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	MAP4K4	O95819	1239 aa	Predicted RBP	12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	MECOM	Q03112	1051 aa		12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	HSP90AB4P	Q58FF6	505 aa		12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	CEP85	Q6P2H3	762 aa		12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	MIGA2	Q7L4E1	593 aa		12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	ERO1B	Q86YB8	467 aa		12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	NOL10	Q9BSC4	688 aa	Known RBP	12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	IDI2	Q9BXS1	227 aa		12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	GAK	O14976	1311 aa		12.85	□□□□□ -0.35
TUBA1A-204	ENST00000547939	TESPA1	A2RU30	521 aa	Predicted RBP	12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	HMMR	O75330	724 aa		12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	GJA5	P36382	358 aa		12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	BTD	P43251	543 aa		12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	RGS3	P49796	1198 aa		12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	NFIA	Q12857	509 aa		12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	ZKSCAN4	Q969J2	545 aa	Predicted RBP	12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	ZNF333	Q96JL9	665 aa		12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	FAM198A	Q9UFP1	575 aa		12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	MROH7-TTC4	A0A0A0MT08	1334 aa		12.84	□□□□□ -0.35
TUBA1A-204	ENST00000547939	GPR75-ASB3	A0A0A6YYF3	556 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CCL15-CCL14	A0A0B4J2E2	113 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	SPDYE5	A6NIY4	337 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	IGSF3	O75054	1194 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CETP	P11597	493 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	MCAM	P43121	646 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	SNAPC2	Q13487	334 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CCL15	Q16663	113 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	TBC1D9	Q6ZT07	1266 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	NSUN4	Q96CB9	384 aa	Known RBP	12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	DBNDD2	Q9BQY9	259 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	COG6	Q9Y2V7	657 aa		12.83	□□□□□ -0.36
TUBA1A-204	ENST00000547939	NCOR1	O75376	2440 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	BAG3	O95817	575 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	PPAT	Q06203	517 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	PPIL2	Q13356	520 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	PICALM	Q13492	652 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	PI16	Q6UXB8	463 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CNKSR2	Q8WXI2	1034 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	MS4A4A	Q96JQ5	239 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ZFYVE28	Q9HCC9	887 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	SNRK	Q9NRH2	765 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	SNCAIP	Q9Y6H5	919 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ECM29	Q5VYK3	1845 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ARAP2	Q8WZ64	1704 aa		12.82	□□□□□ -0.36
TUBA1A-204	ENST00000547939	NPM3	O75607	178 aa	Known RBP	12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	PLCG2	P16885	1265 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	INPP5B	P32019	993 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ARHGEF6	Q15052	776 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	NAA16	Q6N069	864 aa	Predicted RBP	12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ZFPM1	Q8IX07	1006 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CD99L2	Q8TCZ2	262 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	BRI3BP	Q8WY22	251 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ERO1A	Q96HE7	468 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	LRCH3	Q96II8	777 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	PTPN18	Q99952	460 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ZNF112	Q9UJU3	913 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	EXOC6B	Q9Y2D4	811 aa		12.81	□□□□□ -0.36
TUBA1A-204	ENST00000547939	IRF6	O14896	467 aa		12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CRHR2	Q13324	411 aa		12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	PDE3A	Q14432	1141 aa		12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	TAF1C	Q15572	869 aa	Predicted RBP	12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	AACS	Q86V21	672 aa		12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CLASRP	Q8N2M8	674 aa	Known RBP	12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	EAF2	Q96CJ1	260 aa	Predicted RBP	12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	PICK1	Q9NRD5	415 aa		12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ZBTB40	Q9NUA8	1239 aa		12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	DBNL	Q9UJU6	430 aa	Known RBP	12.8	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CYP2E1	P05181	493 aa	Predicted RBP	12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ZAP70	P43403	619 aa		12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	RHBDL3	P58872	404 aa		12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	SP3	Q02447	781 aa		12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	NOL9	Q5SY16	702 aa	Known RBP	12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	TEX11	Q8IYF3	940 aa		12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	RHPN1	Q8TCX5	695 aa		12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	SHISA4	Q96DD7	197 aa		12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	KIF1BP	Q96EK5	621 aa		12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ZCCHC17	Q9NP64	241 aa	Known RBP	12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CDH23	Q9H251	3354 aa		12.79	□□□□□ -0.36
TUBA1A-204	ENST00000547939	DDTL	A6NHG4	134 aa	Predicted RBP	12.78	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CTNND1	O60716	968 aa	Known RBP	12.78	□□□□□ -0.36
TUBA1A-204	ENST00000547939	RAB11FIP3	O75154	756 aa		12.78	□□□□□ -0.36
TUBA1A-204	ENST00000547939	IFIT2	P09913	472 aa	Known RBP	12.78	□□□□□ -0.36
TUBA1A-204	ENST00000547939	MAP3K10	Q02779	954 aa		12.78	□□□□□ -0.36
TUBA1A-204	ENST00000547939	CERS3	Q8IU89	383 aa		12.78	□□□□□ -0.36
TUBA1A-204	ENST00000547939	ZNF384	Q8TF68	577 aa		12.78	□□□□□ -0.36
TUBA1A-204	ENST00000547939	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
TUBA1A-204	ENST00000547939	DDX4	Q9NQI0	724 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms