RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 IKZF1Q13422 519 aa4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 MTMR3Q13615 1198 aa4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 LILRA6Q6PI73 481 aa4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 CILP2Q8IUL8 1156 aa4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 LRRC56Q8IYG6 542 aaPredicted RBP4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 CCDC86Q9H6F5 360 aaKnown RBP4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 DISC1Q9NRI5 854 aa4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 LMCD1Q9NZU5 365 aa4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 EGFL7Q9UHF1 273 aa4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 BRPF3Q9ULD4 1205 aa4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 PCDHGC5Q9Y5F6 944 aa4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 GLI1P08151 1106 aa4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 LIG1P18858 919 aa4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 ZP2Q05996 745 aa4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 TTLL4Q14679 1199 aa4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 CCER1Q8TC90 406 aaPredicted RBP4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 DNAJC25Q9H1X3 360 aa4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 ABCB6Q9NP58 842 aa4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 SSU72Q9NP77 194 aaKnown RBP4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 PLAGL2Q9UPG8 496 aa4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 CTNND2Q9UQB3 1225 aa4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 CC2D2AQ9P2K1 1620 aa4.96□□□□□ -1.62
DEPDC4-204ENST00000547823 NACADO15069 1562 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 BICRAQ9NZM4 1560 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 ZNF503-AS2A6NEH8 195 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 NFIBO00712 420 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 NDUFB5O43674 189 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 PPP1R15AO75807 674 aaPredicted RBP4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 XRCC5P13010 732 aaKnown RBP4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 ITIH2P19823 946 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 CFPP27918 469 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 CD96P40200 585 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 ERVK-24P63145 666 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 B4GALNT3Q6L9W6 998 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 TOP6BLQ8N6T0 577 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 RNF214Q8ND24 703 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 CITED4Q96RK1 184 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 CCDC87Q9NVE4 849 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 NCANO14594 1321 aa4.95□□□□□ -1.62
DEPDC4-204ENST00000547823 TMEM238LA0A1B0GVL6 79 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 GNAT3A8MTJ3 354 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 PRRG2O14669 202 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 ZNF862O60290 1169 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 LEFTY1O75610 366 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 HCLS1P14317 486 aaPredicted RBP4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 MPZL3Q6UWV2 235 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 FBXO15Q8NCQ5 510 aaPredicted RBP4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 KIRREL1Q96J84 757 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 EMILIN2Q9BXX0 1053 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 NPHS2Q9NP85 383 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 TMEM39AQ9NV64 488 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 PPP4R2Q9NY27 417 aa4.94□□□□□ -1.62
DEPDC4-204ENST00000547823 ABL1P00519 1130 aa4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 ZSCAN22P10073 491 aaPredicted RBP4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 TMEM67Q5HYA8 995 aa4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 SYDE1Q6ZW31 735 aaPredicted RBP4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 CYFIP1Q7L576 1253 aa4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 C1QL4Q86Z23 238 aa4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 KCT2Q8NC54 265 aa4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 ISL2Q96A47 359 aa4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 WDR89Q96FK6 387 aaPredicted RBP4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 MAPK8IP1Q9UQF2 711 aa4.93□□□□□ -1.62
DEPDC4-204ENST00000547823 TMEM88BA6NKF7 163 aa4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 B8ZZF3 427 aa4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 GADD45BO75293 160 aaPredicted RBP4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 ZC3H12AQ5D1E8 599 aaKnown RBP4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 AMIGO3Q86WK7 504 aa4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 SPACA3Q8IXA5 215 aa4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 PRDM10Q9NQV6 1147 aa4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 GPN3Q9UHW5 284 aaPredicted RBP4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 U3KQE9 123 aa4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 PITPNM2Q9BZ72 1349 aa4.92□□□□□ -1.62
DEPDC4-204ENST00000547823 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 ICMTO60725 284 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 NEFMP07197 916 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 ZNF865P0CJ78 1059 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 GDNFP39905 211 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 USPL1Q5W0Q7 1092 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 DTHD1Q6ZMT9 781 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 LCNL1Q6ZST4 164 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 TTLL10Q6ZVT0 673 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 KCNB2Q92953 911 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 CCDC74AQ96AQ1 378 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 LIN37Q96GY3 246 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 HEXIM2Q96MH2 286 aaKnown RBP4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 FAM129BQ96TA1 746 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 FOXQ1Q9C009 403 aa4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 ZC3H12CQ9C0D7 883 aaKnown RBP4.91□□□□□ -1.62
DEPDC4-204ENST00000547823 FAAP100Q0VG06 881 aa4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 ZNF211Q13398 564 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 SCARA3Q6AZY7 606 aa4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 C22orf34Q6ZV56 151 aa4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 FAM214BQ7L5A3 538 aa4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 PDZD3Q86UT5 571 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms