RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CTR9Q6PD62 1173 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 TTLL6Q8N841 843 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 IGDCC4Q8TDY8 1250 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 NBPF3Q9H094 633 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 DCP1AQ9NPI6 582 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-215ENST00000547672 TAOK2Q9UL54 1235 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 SLC12A7Q9Y666 1083 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 GOLGA8BA8MQT2 603 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 USP17L12C9JPN9 530 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 USP17L21D6R901 530 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 ZBTB43O43298 467 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 KDM4AO75164 1064 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 MBD3O95983 291 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 F13A1P00488 732 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 CALM1P0DP23 149 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 CALM2P0DP24 149 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 CALM3P0DP25 149 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 TGFB2P61812 414 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 GTF2IP78347 998 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 HDLBPQ00341 1268 aaKnown RBP15.74■□□□□ 0.11
PTCH1-215ENST00000547672 WTAPQ15007 396 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 ATL3Q6DD88 541 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 DEFB132Q7Z7B7 95 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 ZNF384Q8TF68 577 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 SDR42E1Q8WUS8 393 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 WASF1Q92558 559 aa15.74■□□□□ 0.11
PTCH1-215ENST00000547672 A0A0G2JLW4 131 aa15.73■□□□□ 0.11
PTCH1-215ENST00000547672 VPS37CA5D8V6 355 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-215ENST00000547672 METAP2P50579 478 aaKnown RBP eCLIP15.73■□□□□ 0.11
PTCH1-215ENST00000547672 ANTXR2P58335 489 aa15.73■□□□□ 0.11
PTCH1-215ENST00000547672 PKP1Q13835 747 aa15.73■□□□□ 0.11
PTCH1-215ENST00000547672 GSE1Q14687 1217 aa15.73■□□□□ 0.11
PTCH1-215ENST00000547672 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
PTCH1-215ENST00000547672 STRIP1Q5VSL9 837 aa15.73■□□□□ 0.11
PTCH1-215ENST00000547672 CHST3Q7LGC8 479 aa15.73■□□□□ 0.11
PTCH1-215ENST00000547672 MTMR6Q9Y217 621 aa15.73■□□□□ 0.11
PTCH1-215ENST00000547672 LTBP1Q14766 1721 aa15.73■□□□□ 0.11
PTCH1-215ENST00000547672 TIAM2Q8IVF5 1701 aa15.73■□□□□ 0.11
PTCH1-215ENST00000547672 CHD4Q14839 1912 aa15.72■□□□□ 0.11
PTCH1-215ENST00000547672 GAKO14976 1311 aa15.72■□□□□ 0.11
PTCH1-215ENST00000547672 EP400Q96L91 3159 aa15.72■□□□□ 0.11
PTCH1-215ENST00000547672 CCT2P78371 535 aaKnown RBP15.72■□□□□ 0.11
PTCH1-215ENST00000547672 CCDC93Q567U6 631 aa15.72■□□□□ 0.11
PTCH1-215ENST00000547672 HHIPL2Q6UWX4 724 aa15.72■□□□□ 0.11
PTCH1-215ENST00000547672 CYB5R4Q7L1T6 521 aa15.72■□□□□ 0.11
PTCH1-215ENST00000547672 NSUN7Q8NE18 718 aaKnown RBP15.72■□□□□ 0.11
PTCH1-215ENST00000547672 MCM9Q9NXL9 1143 aa15.72■□□□□ 0.11
PTCH1-215ENST00000547672 ISY1Q9ULR0 285 aaKnown RBP15.72■□□□□ 0.11
PTCH1-215ENST00000547672 DDX49Q9Y6V7 483 aaKnown RBP15.72■□□□□ 0.11
PTCH1-215ENST00000547672 NEDD4P46934 1319 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 PTPDC1A2A3K4 754 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 POLR3DP05423 398 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-215ENST00000547672 BTDP43251 543 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 KLHL40Q2TBA0 621 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 C12orf60Q5U649 245 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 APOA5Q6Q788 366 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 TEX11Q8IYF3 940 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 KLHL34Q8N239 644 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 C7orf43Q8WVR3 580 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 GPR101Q96P66 508 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-215ENST00000547672 LY9Q9HBG7 655 aa15.71■□□□□ 0.11
PTCH1-215ENST00000547672 C10orf71Q711Q0 1435 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 RANBP6O60518 1105 aaKnown RBP15.7■□□□□ 0.1
PTCH1-215ENST00000547672 PRPF40AO75400 957 aaKnown RBP15.7■□□□□ 0.1
PTCH1-215ENST00000547672 KRT85P78386 507 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 ST3GAL1Q11201 340 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 CATIPQ7Z7H3 387 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 TTC6Q86TZ1 520 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 TRIM22Q8IYM9 498 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 ZNF444Q8N0Y2 327 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-215ENST00000547672 SH3RF3Q8TEJ3 882 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-215ENST00000547672 FBXW7Q969H0 707 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 TEKT1Q969V4 418 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 SYAP1Q96A49 352 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-215ENST00000547672 ZSCAN10Q96SZ4 725 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-215ENST00000547672 SCAND2PQ9GZW5 306 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-215ENST00000547672 MTFR1LQ9H019 292 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 MKNK2Q9HBH9 465 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 CFAP45Q9UL16 551 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 BRPF3Q9ULD4 1205 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 JAG2Q9Y219 1238 aa15.7■□□□□ 0.1
PTCH1-215ENST00000547672 MYH2Q9UKX2 1941 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 USP17L3A6NCW0 530 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 USP17L4A6NCW7 530 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 GOLGA8AA7E2F4 631 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 CHRNA5P30532 468 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 MMP14P50281 582 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 KIAA2012Q0VF49 1180 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 DOK7Q18PE1 504 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 FOXD4L5Q5VV16 416 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-215ENST00000547672 USP17L1Q7RTZ2 530 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 TMEM87AQ8NBN3 555 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 FOXD4L4Q8WXT5 416 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-215ENST00000547672 PSMD1Q99460 953 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 LMBRD1Q9NUN5 540 aa15.69■□□□□ 0.1
PTCH1-215ENST00000547672 RBM28Q9NW13 759 aaKnown RBP15.69■□□□□ 0.1
PTCH1-215ENST00000547672 ORC3Q9UBD5 711 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-215ENST00000547672 MKRN1Q9UHC7 482 aaKnown RBP15.69■□□□□ 0.1
PTCH1-215ENST00000547672 TTF2Q9UNY4 1162 aaKnown RBP15.69■□□□□ 0.1
PTCH1-215ENST00000547672 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms