RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 DLK2Q6UY11 383 aa27.82■■■□□ 2.04
SMARCD1-203ENST00000547247 MAPKAPK5Q8IW41 473 aa27.82■■■□□ 2.04
SMARCD1-203ENST00000547247 FLT1P17948 1338 aa27.82■■■□□ 2.04
SMARCD1-203ENST00000547247 PASKQ96RG2 1323 aa27.82■■■□□ 2.04
SMARCD1-203ENST00000547247 PRAMEF18Q5VWM3 479 aa27.82■■■□□ 2.04
SMARCD1-203ENST00000547247 SDR42E1Q8WUS8 393 aa27.82■■■□□ 2.04
SMARCD1-203ENST00000547247 CDCA5Q96FF9 252 aa27.82■■■□□ 2.04
SMARCD1-203ENST00000547247 SLC4A4Q9Y6R1 1079 aa27.82■■■□□ 2.04
SMARCD1-203ENST00000547247 GNAT2P19087 354 aa27.81■■■□□ 2.04
SMARCD1-203ENST00000547247 ZFPM1Q8IX07 1006 aa27.81■■■□□ 2.04
SMARCD1-203ENST00000547247 OSBPL5Q9H0X9 879 aaPredicted RBP27.81■■■□□ 2.04
SMARCD1-203ENST00000547247 CDK5RAP2Q96SN8 1893 aa27.8■■■□□ 2.04
SMARCD1-203ENST00000547247 PRKAB2O43741 272 aa27.8■■■□□ 2.04
SMARCD1-203ENST00000547247 APLP1P51693 650 aa27.8■■■□□ 2.04
SMARCD1-203ENST00000547247 CCDC129Q6ZRS4 1044 aa27.8■■■□□ 2.04
SMARCD1-203ENST00000547247 RUFY2Q8WXA3 655 aa27.8■■■□□ 2.04
SMARCD1-203ENST00000547247 TEPSINQ96N21 525 aa27.8■■■□□ 2.04
SMARCD1-203ENST00000547247 ATP8A2Q9NTI2 1148 aa27.8■■■□□ 2.04
SMARCD1-203ENST00000547247 RPAP1Q9BWH6 1393 aaPredicted RBP27.8■■■□□ 2.04
SMARCD1-203ENST00000547247 TRPM7Q96QT4 1865 aa27.79■■■□□ 2.04
SMARCD1-203ENST00000547247 FMR1Q06787 632 aaKnown RBP eCLIP27.79■■■□□ 2.044e-6■■□□□ 12.4
SMARCD1-203ENST00000547247 ZSCAN29Q8IWY8 852 aaPredicted RBP27.79■■■□□ 2.04
SMARCD1-203ENST00000547247 FOCADQ5VW36 1801 aa27.79■■■□□ 2.04
SMARCD1-203ENST00000547247 MFAP1P55081 439 aaKnown RBP27.78■■■□□ 2.04
SMARCD1-203ENST00000547247 SUPT20HL1Q3ZLR7 823 aa27.78■■■□□ 2.04
SMARCD1-203ENST00000547247 NBPF12Q5TAG4 269 aaPredicted RBP27.78■■■□□ 2.04
SMARCD1-203ENST00000547247 DCP1AQ9NPI6 582 aaPredicted RBP27.78■■■□□ 2.04
SMARCD1-203ENST00000547247 NF2P35240 595 aa27.77■■■□□ 2.04
SMARCD1-203ENST00000547247 ZNF589Q86UQ0 364 aaPredicted RBP27.77■■■□□ 2.04
SMARCD1-203ENST00000547247 DDRGK1Q96HY6 314 aa27.77■■■□□ 2.04
SMARCD1-203ENST00000547247 MKRN1Q9UHC7 482 aaKnown RBP27.77■■■□□ 2.04
SMARCD1-203ENST00000547247 CCDC171Q6TFL3 1326 aa27.77■■■□□ 2.04
SMARCD1-203ENST00000547247 CDAN1Q8IWY9 1227 aa27.77■■■□□ 2.04
SMARCD1-203ENST00000547247 DHX36Q9H2U1 1008 aaKnown RBP27.77■■■□□ 2.04
SMARCD1-203ENST00000547247 COL2A1P02458 1487 aaPredicted RBP27.77■■■□□ 2.04
SMARCD1-203ENST00000547247 ATRNL1Q5VV63 1379 aa27.76■■■□□ 2.03
SMARCD1-203ENST00000547247 DDTLA6NHG4 134 aaPredicted RBP27.76■■■□□ 2.03
SMARCD1-203ENST00000547247 GSG1L2A8MUP6 293 aa27.76■■■□□ 2.03
SMARCD1-203ENST00000547247 PATL2C9JE40 543 aaKnown RBP27.76■■■□□ 2.03
SMARCD1-203ENST00000547247 CDC45O75419 566 aa27.76■■■□□ 2.03
SMARCD1-203ENST00000547247 SH3BP5LQ7L8J4 393 aa27.76■■■□□ 2.03
SMARCD1-203ENST00000547247 CSRNP1Q96S65 589 aa27.76■■■□□ 2.03
SMARCD1-203ENST00000547247 ZNF408Q9H9D4 720 aa27.76■■■□□ 2.03
SMARCD1-203ENST00000547247 RAD50Q92878 1312 aa27.75■■■□□ 2.03
SMARCD1-203ENST00000547247 APPP05067 770 aa27.75■■■□□ 2.03
SMARCD1-203ENST00000547247 GIMAP6Q6P9H5 292 aa27.75■■■□□ 2.03
SMARCD1-203ENST00000547247 CASC1Q6TDU7 716 aa27.75■■■□□ 2.03
SMARCD1-203ENST00000547247 HOOK2Q96ED9 719 aa27.75■■■□□ 2.03
SMARCD1-203ENST00000547247 MCM9Q9NXL9 1143 aa27.75■■■□□ 2.03
SMARCD1-203ENST00000547247 SAP30BPQ9UHR5 308 aaKnown RBP27.75■■■□□ 2.03
SMARCD1-203ENST00000547247 PALD1Q9ULE6 856 aa27.75■■■□□ 2.03
SMARCD1-203ENST00000547247 CELF2O95319 508 aaKnown RBP27.74■■■□□ 2.03
SMARCD1-203ENST00000547247 HTRA3P83110 453 aa27.74■■■□□ 2.03
SMARCD1-203ENST00000547247 NACAP1Q9BZK3 213 aa27.73■■■□□ 2.03
SMARCD1-203ENST00000547247 VPS53Q5VIR6 699 aa27.73■■■□□ 2.03
SMARCD1-203ENST00000547247 IL25Q9H293 177 aa27.73■■■□□ 2.03
SMARCD1-203ENST00000547247 MYH1P12882 1939 aa27.72■■■□□ 2.03
SMARCD1-203ENST00000547247 SGSM2O43147 1006 aa27.72■■■□□ 2.03
SMARCD1-203ENST00000547247 POLR3DP05423 398 aaPredicted RBP27.72■■■□□ 2.03
SMARCD1-203ENST00000547247 TTC6Q86TZ1 520 aa27.72■■■□□ 2.03
SMARCD1-203ENST00000547247 IFNL3Q8IZI9 196 aa27.72■■■□□ 2.03
SMARCD1-203ENST00000547247 EPB41L4AQ9HCS5 686 aaPredicted RBP27.72■■■□□ 2.03
SMARCD1-203ENST00000547247 PI4KBQ9UBF8 816 aa27.72■■■□□ 2.03
SMARCD1-203ENST00000547247 CEP350Q5VT06 3117 aa27.72■■■□□ 2.03
SMARCD1-203ENST00000547247 NAV1Q8NEY1 1877 aa27.72■■■□□ 2.03
SMARCD1-203ENST00000547247 HLA-DOAP06340 250 aa27.71■■■□□ 2.03
SMARCD1-203ENST00000547247 HSPD1P10809 573 aaKnown RBP27.71■■■□□ 2.03
SMARCD1-203ENST00000547247 CST9Q5W186 159 aa27.71■■■□□ 2.03
SMARCD1-203ENST00000547247 AMOTL1Q8IY63 956 aa27.71■■■□□ 2.03
SMARCD1-203ENST00000547247 PPP1R12BO60237 982 aaPredicted RBP27.7■■■□□ 2.03
SMARCD1-203ENST00000547247 TDO2P48775 406 aa27.7■■■□□ 2.03
SMARCD1-203ENST00000547247 SLC4A8Q2Y0W8 1093 aa27.7■■■□□ 2.03
SMARCD1-203ENST00000547247 SSC5DA1L4H1 1573 aa27.7■■■□□ 2.02
SMARCD1-203ENST00000547247 TMEM88BA6NKF7 163 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 USP17L12C9JPN9 530 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 USP17L21D6R901 530 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 FOXP2O15409 715 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 DCAF15Q66K64 600 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 ESYT1Q9BSJ8 1104 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 NAPBQ9H115 298 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 GBA2Q9HCG7 927 aaPredicted RBP27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 CREBZFQ9NS37 354 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 ARPP21Q9UBL0 812 aaPredicted RBP27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 PRKG1Q13976 671 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 CTR9Q6PD62 1173 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 MIGA2Q7L4E1 593 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 FOXP4Q8IVH2 680 aaPredicted RBP27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 C2orf69Q8N8R5 385 aa27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 DDX60LQ5H9U9 1706 aaKnown RBP27.69■■■□□ 2.02
SMARCD1-203ENST00000547247 BAZ2AQ9UIF9 1905 aaKnown RBP27.68■■■□□ 2.02
SMARCD1-203ENST00000547247 FKBP1BP68106 108 aa27.68■■■□□ 2.02
SMARCD1-203ENST00000547247 TTLL12Q14166 644 aaPredicted RBP27.68■■■□□ 2.02
SMARCD1-203ENST00000547247 PLCD1P51178 756 aa27.67■■■□□ 2.02
SMARCD1-203ENST00000547247 ALX1Q15699 326 aa27.67■■■□□ 2.02
SMARCD1-203ENST00000547247 SBK1Q52WX2 424 aa27.67■■■□□ 2.02
SMARCD1-203ENST00000547247 C12orf60Q5U649 245 aa27.67■■■□□ 2.02
SMARCD1-203ENST00000547247 ARMC9Q7Z3E5 817 aa27.67■■■□□ 2.02
SMARCD1-203ENST00000547247 DSCC1Q9BVC3 393 aa27.67■■■□□ 2.02
SMARCD1-203ENST00000547247 TBC1D12O60347 775 aa27.66■■■□□ 2.02
SMARCD1-203ENST00000547247 MAP3K10Q02779 954 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms