RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 NOL10Q9BSC4 688 aaKnown RBP18.04■□□□□ 0.48
CCDC38-205ENST00000546947 CDK5RAP2Q96SN8 1893 aa18.03■□□□□ 0.48
CCDC38-205ENST00000546947 FOCADQ5VW36 1801 aa18.03■□□□□ 0.48
CCDC38-205ENST00000546947 BAG3O95817 575 aa18.03■□□□□ 0.48
CCDC38-205ENST00000546947 GJA5P36382 358 aa18.03■□□□□ 0.48
CCDC38-205ENST00000546947 MIGA2Q7L4E1 593 aa18.03■□□□□ 0.48
CCDC38-205ENST00000546947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCDC38-205ENST00000546947 DDX4Q9NQI0 724 aaKnown RBP18.03■□□□□ 0.48
CCDC38-205ENST00000546947 PIH1D3Q9NQM4 214 aaKnown RBP18.03■□□□□ 0.48
CCDC38-205ENST00000546947 ALDH1A1P00352 501 aa18.02■□□□□ 0.48
CCDC38-205ENST00000546947 PICALMQ13492 652 aa18.02■□□□□ 0.48
CCDC38-205ENST00000546947 TMED8Q6PL24 325 aaPredicted RBP18.02■□□□□ 0.48
CCDC38-205ENST00000546947 ZFPM1Q8IX07 1006 aa18.02■□□□□ 0.48
CCDC38-205ENST00000546947 CFHR5Q9BXR6 569 aa18.02■□□□□ 0.48
CCDC38-205ENST00000546947 ZNF112Q9UJU3 913 aa18.02■□□□□ 0.48
CCDC38-205ENST00000546947 SNCAIPQ9Y6H5 919 aa18.02■□□□□ 0.48
CCDC38-205ENST00000546947 ATRNL1Q5VV63 1379 aa18.02■□□□□ 0.47
CCDC38-205ENST00000546947 COL2A1P02458 1487 aaPredicted RBP18.01■□□□□ 0.47
CCDC38-205ENST00000546947 TESPA1A2RU30 521 aaPredicted RBP18.01■□□□□ 0.47
CCDC38-205ENST00000546947 SPDYE5A6NIY4 337 aa18.01■□□□□ 0.47
CCDC38-205ENST00000546947 PLCG2P16885 1265 aa18.01■□□□□ 0.47
CCDC38-205ENST00000546947 PPP4CP60510 307 aa18.01■□□□□ 0.47
CCDC38-205ENST00000546947 TTF1Q15361 905 aaPredicted RBP18.01■□□□□ 0.47
CCDC38-205ENST00000546947 IFNL1Q8IU54 200 aa18.01■□□□□ 0.47
CCDC38-205ENST00000546947 ZSCAN29Q8IWY8 852 aaPredicted RBP18.01■□□□□ 0.47
CCDC38-205ENST00000546947 ZKSCAN4Q969J2 545 aaPredicted RBP18.01■□□□□ 0.47
CCDC38-205ENST00000546947 LRRCC1Q9C099 1032 aa18.01■□□□□ 0.47
CCDC38-205ENST00000546947 DDTLA6NHG4 134 aaPredicted RBP18■□□□□ 0.47
CCDC38-205ENST00000546947 IDH1O75874 414 aaKnown RBP18■□□□□ 0.47
CCDC38-205ENST00000546947 OTUD7BQ6GQQ9 843 aa18■□□□□ 0.47
CCDC38-205ENST00000546947 SH3BP5LQ7L8J4 393 aa18■□□□□ 0.47
CCDC38-205ENST00000546947 ERO1BQ86YB8 467 aa18■□□□□ 0.47
CCDC38-205ENST00000546947 TEX11Q8IYF3 940 aa18■□□□□ 0.47
CCDC38-205ENST00000546947 DCTPP1Q9H773 170 aa18■□□□□ 0.47
CCDC38-205ENST00000546947 AATFQ9NY61 560 aaKnown RBP eCLIP18■□□□□ 0.47
CCDC38-205ENST00000546947 GTF2A2P52657 109 aa17.99■□□□□ 0.47
CCDC38-205ENST00000546947 MAP3K10Q02779 954 aa17.99■□□□□ 0.47
CCDC38-205ENST00000546947 MAP3K12Q12852 859 aa17.99■□□□□ 0.47
CCDC38-205ENST00000546947 NOM1Q5C9Z4 860 aaKnown RBP17.99■□□□□ 0.47
CCDC38-205ENST00000546947 NOL9Q5SY16 702 aaKnown RBP17.99■□□□□ 0.47
CCDC38-205ENST00000546947 CERS3Q8IU89 383 aa17.99■□□□□ 0.47
CCDC38-205ENST00000546947 OTUD5Q96G74 571 aa17.99■□□□□ 0.47
CCDC38-205ENST00000546947 OSBPL5Q9H0X9 879 aaPredicted RBP17.99■□□□□ 0.47
CCDC38-205ENST00000546947 ANTXR1Q9H6X2 564 aa17.99■□□□□ 0.47
CCDC38-205ENST00000546947 NDUFB9Q9Y6M9 179 aa17.99■□□□□ 0.47
CCDC38-205ENST00000546947 IGF2BP3O00425 579 aaKnown RBP eCLIP17.98■□□□□ 0.47
CCDC38-205ENST00000546947 TBC1D8O95759 1140 aa17.98■□□□□ 0.47
CCDC38-205ENST00000546947 CYP7A1P22680 504 aa17.98■□□□□ 0.47
CCDC38-205ENST00000546947 INPP5BP32019 993 aa17.98■□□□□ 0.47
CCDC38-205ENST00000546947 PPATQ06203 517 aa17.98■□□□□ 0.47
CCDC38-205ENST00000546947 PPIL2Q13356 520 aa17.98■□□□□ 0.47
CCDC38-205ENST00000546947 ADGRA1Q86SQ6 560 aa17.98■□□□□ 0.47
CCDC38-205ENST00000546947 SH3RF3Q8TEJ3 882 aaPredicted RBP17.98■□□□□ 0.47
CCDC38-205ENST00000546947 MS4A4AQ96JQ5 239 aa17.98■□□□□ 0.47
CCDC38-205ENST00000546947 DOCK1Q14185 1865 aa17.98■□□□□ 0.47
CCDC38-205ENST00000546947 TBC1D12O60347 775 aa17.97■□□□□ 0.47
CCDC38-205ENST00000546947 MAGEB6Q8N7X4 407 aa17.97■□□□□ 0.47
CCDC38-205ENST00000546947 BCL11AQ9H165 835 aa17.97■□□□□ 0.47
CCDC38-205ENST00000546947 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
CCDC38-205ENST00000546947 PHF20L1A8MW92 1017 aa17.96■□□□□ 0.47
CCDC38-205ENST00000546947 ATP5JP18859 108 aa17.96■□□□□ 0.47
CCDC38-205ENST00000546947 CRBNQ96SW2 442 aa17.96■□□□□ 0.47
CCDC38-205ENST00000546947 DNAJC2Q99543 621 aaKnown RBP17.96■□□□□ 0.47
CCDC38-205ENST00000546947 PTPN18Q99952 460 aa17.96■□□□□ 0.47
CCDC38-205ENST00000546947 DHX36Q9H2U1 1008 aaKnown RBP17.96■□□□□ 0.47
CCDC38-205ENST00000546947 MYH1P12882 1939 aa17.96■□□□□ 0.47
CCDC38-205ENST00000546947 MYH7P12883 1935 aa17.96■□□□□ 0.47
CCDC38-205ENST00000546947 CCL15-CCL14A0A0B4J2E2 113 aa17.95■□□□□ 0.46
CCDC38-205ENST00000546947 GPR25O00155 361 aa17.95■□□□□ 0.46
CCDC38-205ENST00000546947 IRF6O14896 467 aa17.95■□□□□ 0.46
CCDC38-205ENST00000546947 SMARCA5O60264 1052 aaPredicted RBP17.95■□□□□ 0.46
CCDC38-205ENST00000546947 CCL15Q16663 113 aa17.95■□□□□ 0.46
CCDC38-205ENST00000546947 SCYL3Q8IZE3 742 aa17.95■□□□□ 0.46
CCDC38-205ENST00000546947 TGFBRAP1Q8WUH2 860 aa17.95■□□□□ 0.46
CCDC38-205ENST00000546947 BRI3BPQ8WY22 251 aa17.95■□□□□ 0.46
CCDC38-205ENST00000546947 SIPA1L1O43166 1804 aa17.95■□□□□ 0.46
CCDC38-205ENST00000546947 ATAD5Q96QE3 1844 aa17.95■□□□□ 0.46
CCDC38-205ENST00000546947 GOLIM4O00461 696 aa17.94■□□□□ 0.46
CCDC38-205ENST00000546947 CETPP11597 493 aa17.94■□□□□ 0.46
CCDC38-205ENST00000546947 DYNLL1P63167 89 aaKnown RBP17.94■□□□□ 0.46
CCDC38-205ENST00000546947 SNAPC2Q13487 334 aa17.94■□□□□ 0.46
CCDC38-205ENST00000546947 HAUS7Q99871 368 aa17.94■□□□□ 0.46
CCDC38-205ENST00000546947 BOLA2Q9H3K6 86 aa17.94■□□□□ 0.46
CCDC38-205ENST00000546947 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCDC38-205ENST00000546947 PAG1Q9NWQ8 432 aa17.94■□□□□ 0.46
CCDC38-205ENST00000546947 FLT1P17948 1338 aa17.94■□□□□ 0.46
CCDC38-205ENST00000546947 PHIPQ8WWQ0 1821 aa17.93■□□□□ 0.46
CCDC38-205ENST00000546947 CTNND1O60716 968 aaKnown RBP17.93■□□□□ 0.46
CCDC38-205ENST00000546947 DGKZQ13574 1117 aa17.93■□□□□ 0.46
CCDC38-205ENST00000546947 AAMPQ13685 434 aa17.93■□□□□ 0.46
CCDC38-205ENST00000546947 MAPKAPK5Q8IW41 473 aa17.93■□□□□ 0.46
CCDC38-205ENST00000546947 ZNF296Q8WUU4 475 aaPredicted RBP17.93■□□□□ 0.46
CCDC38-205ENST00000546947 ZCCHC17Q9NP64 241 aaKnown RBP17.93■□□□□ 0.46
CCDC38-205ENST00000546947 PI4KBQ9UBF8 816 aa17.93■□□□□ 0.46
CCDC38-205ENST00000546947 HERC5Q9UII4 1024 aaKnown RBP17.93■□□□□ 0.46
CCDC38-205ENST00000546947 FKTNO75072 461 aa17.92■□□□□ 0.46
CCDC38-205ENST00000546947 PDE6AP16499 860 aa17.92■□□□□ 0.46
CCDC38-205ENST00000546947 SLC9C2Q5TAH2 1124 aa17.92■□□□□ 0.46
CCDC38-205ENST00000546947 MIGA1Q8NAN2 632 aa17.92■□□□□ 0.46
CCDC38-205ENST00000546947 MCOLN1Q9GZU1 580 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms