RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GDPD2Q9HCC8 539 aa7.94□□□□□ -1.14
PRKDC-211ENST00000546304 NXF1Q9UBU9 619 aaKnown RBP7.94□□□□□ -1.14
PRKDC-211ENST00000546304 RTL9Q8NET4 1388 aa7.94□□□□□ -1.14
PRKDC-211ENST00000546304 FER1L6Q2WGJ9 1857 aa7.94□□□□□ -1.14
PRKDC-211ENST00000546304 KLRG2A4D1S0 409 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-211ENST00000546304 MAN1A2O60476 641 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 PDE8AO60658 829 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 ADH1AP07327 375 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 SRGNP10124 158 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 CHRNA5P30532 468 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 ADD1P35611 737 aaKnown RBP7.93□□□□□ -1.14
PRKDC-211ENST00000546304 TGFB2P61812 414 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 SLC10A5Q5PT55 438 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 ERICH6Q7L0X2 663 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 C2CD5Q86YS7 1000 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 RPGRQ92834 1020 aaKnown RBP7.93□□□□□ -1.14
PRKDC-211ENST00000546304 SUCLG2Q96I99 432 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 NLRP3Q96P20 1036 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 SYT17Q9BSW7 474 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 USP44Q9H0E7 712 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 DDX19BQ9UMR2 479 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 COG6Q9Y2V7 657 aa7.93□□□□□ -1.14
PRKDC-211ENST00000546304 TTLL8A6PVC2 850 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 H0YIN7 160 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 GNAI3P08754 354 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 NPR1P16066 1061 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 DPEP1P16444 411 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 CCDC152Q4G0S7 254 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 KDF1Q8NAX2 398 aaPredicted RBP7.92□□□□□ -1.14
PRKDC-211ENST00000546304 MASTLQ96GX5 879 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 AGBL1Q96MI9 1066 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 BICC1Q9H694 974 aaKnown RBP7.92□□□□□ -1.14
PRKDC-211ENST00000546304 CEP126Q9P2H0 1117 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 LRRFIP2Q9Y608 721 aaKnown RBP7.92□□□□□ -1.14
PRKDC-211ENST00000546304 TIAM2Q8IVF5 1701 aa7.92□□□□□ -1.14
PRKDC-211ENST00000546304 A0A0G2JLW4 131 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 SOBPA7XYQ1 873 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 HOXA10P31260 410 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-211ENST00000546304 ABL2P42684 1182 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 ERVK-9P63128 1117 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 FOXO4P98177 505 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 RELBQ01201 579 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 SF3B3Q15393 1217 aaKnown RBP7.91□□□□□ -1.14
PRKDC-211ENST00000546304 WASHC4Q2M389 1173 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 RABL6Q3YEC7 729 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-211ENST00000546304 EPHA10Q5JZY3 1008 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 STYK1Q6J9G0 422 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 PRPF40BQ6NWY9 871 aaKnown RBP7.91□□□□□ -1.14
PRKDC-211ENST00000546304 ANKRD44Q8N8A2 993 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 KAZALD1Q96I82 304 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 CCDC85AQ96PX6 553 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-211ENST00000546304 GREM2Q9H772 168 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 CYLDQ9NQC7 956 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 DNMT3LQ9UJW3 386 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 WWC3Q9ULE0 1092 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 HDAC5Q9UQL6 1122 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 SUPT16HQ9Y5B9 1047 aaKnown RBP7.91□□□□□ -1.14
PRKDC-211ENST00000546304 DUOX1Q9NRD9 1551 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 ARAP2Q8WZ64 1704 aa7.91□□□□□ -1.14
PRKDC-211ENST00000546304 CCDC88AQ3V6T2 1871 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 SNED1Q8TER0 1413 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 H3BM21 787 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 GNAI2P04899 355 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 KCNA3P22001 575 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 PTGIRP43119 386 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 GRAPQ13588 217 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.14
PRKDC-211ENST00000546304 LMBR1LQ6UX01 489 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 DDX46Q7L014 1031 aaKnown RBP7.9□□□□□ -1.14
PRKDC-211ENST00000546304 TTLL11Q8NHH1 800 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 GRAPLQ8TC17 118 aaPredicted RBP7.9□□□□□ -1.14
PRKDC-211ENST00000546304 CNKSR1Q969H4 720 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 ZNF622Q969S3 477 aaKnown RBP eCLIP7.9□□□□□ -1.14
PRKDC-211ENST00000546304 RBM17Q96I25 401 aaKnown RBP7.9□□□□□ -1.14
PRKDC-211ENST00000546304 C1orf115Q9H7X2 142 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 CHMP3Q9Y3E7 222 aa7.9□□□□□ -1.14
PRKDC-211ENST00000546304 CHD4Q14839 1912 aa7.9□□□□□ -1.15
PRKDC-211ENST00000546304 DICER1Q9UPY3 1922 aaKnown RBP7.9□□□□□ -1.15
PRKDC-211ENST00000546304 SBF1O95248 1867 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 ZBTB7BO15156 539 aaPredicted RBP7.89□□□□□ -1.15
PRKDC-211ENST00000546304 CSF1RP07333 972 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 ITGA6P23229 1130 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 IFIT5Q13325 482 aaKnown RBP7.89□□□□□ -1.15
PRKDC-211ENST00000546304 MTX1Q13505 466 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 DALRD3Q5D0E6 543 aaKnown RBP7.89□□□□□ -1.15
PRKDC-211ENST00000546304 CC2D2BQ6DHV5 1058 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 TTLL6Q8N841 843 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 CRAMP1Q96RY5 1269 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 CRBNQ96SW2 442 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 CDC5LQ99459 802 aaKnown RBP7.89□□□□□ -1.15
PRKDC-211ENST00000546304 CHMP4BQ9H444 224 aaKnown RBP7.89□□□□□ -1.15
PRKDC-211ENST00000546304 SEC31BQ9NQW1 1179 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 PIM2Q9P1W9 311 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 PCDHB11Q9Y5F2 797 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 MYH13Q9UKX3 1938 aa7.89□□□□□ -1.15
PRKDC-211ENST00000546304 ANKRD18BA2A2Z9 1011 aa7.88□□□□□ -1.15
PRKDC-211ENST00000546304 ALDH1B1P30837 517 aa7.88□□□□□ -1.15
PRKDC-211ENST00000546304 CTSOP43234 321 aaPredicted RBP7.88□□□□□ -1.15
PRKDC-211ENST00000546304 VAC14Q08AM6 782 aa7.88□□□□□ -1.15
PRKDC-211ENST00000546304 CCDC57Q2TAC2 916 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms