RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 DNAJC5GQ8N7S2 189 aa20.3■□□□□ 0.84
LTBR-215ENST00000546296 EVI5LQ96CN4 794 aa20.3■□□□□ 0.84
LTBR-215ENST00000546296 OSBPL3Q9H4L5 887 aa20.3■□□□□ 0.84
LTBR-215ENST00000546296 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.3■□□□□ 0.84
LTBR-215ENST00000546296 MAST2Q6P0Q8 1798 aa20.3■□□□□ 0.84
LTBR-215ENST00000546296 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
LTBR-215ENST00000546296 CHGBP05060 677 aa20.29■□□□□ 0.84
LTBR-215ENST00000546296 PDE4AP27815 886 aa20.29■□□□□ 0.84
LTBR-215ENST00000546296 ECE1P42892 770 aa20.29■□□□□ 0.84
LTBR-215ENST00000546296 ZNF157P51786 506 aaPredicted RBP20.29■□□□□ 0.84
LTBR-215ENST00000546296 DCAF15Q66K64 600 aa20.29■□□□□ 0.84
LTBR-215ENST00000546296 RGMBQ6NW40 437 aa20.29■□□□□ 0.84
LTBR-215ENST00000546296 KLRG1Q96E93 195 aa20.29■□□□□ 0.84
LTBR-215ENST00000546296 HHIPL1Q96JK4 782 aa20.29■□□□□ 0.84
LTBR-215ENST00000546296 CSRNP1Q96S65 589 aa20.29■□□□□ 0.84
LTBR-215ENST00000546296 RIOK1Q9BRS2 568 aaKnown RBP20.29■□□□□ 0.84
LTBR-215ENST00000546296 CRNKL1Q9BZJ0 848 aaKnown RBP20.29■□□□□ 0.84
LTBR-215ENST00000546296 OSBPL5Q9H0X9 879 aaPredicted RBP20.29■□□□□ 0.84
LTBR-215ENST00000546296 MYO5AQ9Y4I1 1855 aaKnown RBP20.28■□□□□ 0.84
LTBR-215ENST00000546296 VEGFBP49765 207 aa20.28■□□□□ 0.84
LTBR-215ENST00000546296 ERICH6BQ5W0A0 696 aa20.28■□□□□ 0.84
LTBR-215ENST00000546296 CYP4F22Q6NT55 531 aa20.28■□□□□ 0.84
LTBR-215ENST00000546296 MIGA2Q7L4E1 593 aa20.28■□□□□ 0.84
LTBR-215ENST00000546296 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
LTBR-215ENST00000546296 AIDAQ96BJ3 306 aa20.28■□□□□ 0.84
LTBR-215ENST00000546296 ARMT1Q9H993 441 aa20.28■□□□□ 0.84
LTBR-215ENST00000546296 RFX7Q2KHR2 1363 aa20.28■□□□□ 0.84
LTBR-215ENST00000546296 RPAP1Q9BWH6 1393 aaPredicted RBP20.28■□□□□ 0.84
LTBR-215ENST00000546296 SSC5DA1L4H1 1573 aa20.27■□□□□ 0.84
LTBR-215ENST00000546296 DDTLA6NHG4 134 aaPredicted RBP20.27■□□□□ 0.84
LTBR-215ENST00000546296 MBD4O95243 580 aa20.27■□□□□ 0.84
LTBR-215ENST00000546296 SH3BP5LQ7L8J4 393 aa20.27■□□□□ 0.84
LTBR-215ENST00000546296 LCORLQ8N3X6 602 aa20.27■□□□□ 0.84
LTBR-215ENST00000546296 CAPNS2Q96L46 248 aa20.27■□□□□ 0.84
LTBR-215ENST00000546296 DOCK2Q92608 1830 aa20.27■□□□□ 0.84
LTBR-215ENST00000546296 FLT1P17948 1338 aa20.27■□□□□ 0.83
LTBR-215ENST00000546296 MAP3K11Q16584 847 aa20.26■□□□□ 0.83
LTBR-215ENST00000546296 LDLRAD1Q5T700 205 aa20.26■□□□□ 0.83
LTBR-215ENST00000546296 APPBP2Q92624 585 aa20.26■□□□□ 0.83
LTBR-215ENST00000546296 CCDC102AQ96A19 550 aa20.26■□□□□ 0.83
LTBR-215ENST00000546296 SLC10A4Q96EP9 437 aa20.26■□□□□ 0.83
LTBR-215ENST00000546296 ZNF341Q9BYN7 854 aa20.26■□□□□ 0.83
LTBR-215ENST00000546296 PUS7LQ9H0K6 701 aaKnown RBP20.26■□□□□ 0.83
LTBR-215ENST00000546296 SAP30BPQ9UHR5 308 aaKnown RBP20.26■□□□□ 0.83
LTBR-215ENST00000546296 PAPPA2Q9BXP8 1791 aa20.26■□□□□ 0.83
LTBR-215ENST00000546296 WDR33Q9C0J8 1336 aaKnown RBP20.26■□□□□ 0.83
LTBR-215ENST00000546296 DHX36Q9H2U1 1008 aaKnown RBP20.25■□□□□ 0.83
LTBR-215ENST00000546296 PPP4R2Q9NY27 417 aa20.25■□□□□ 0.83
LTBR-215ENST00000546296 CEP350Q5VT06 3117 aa20.25■□□□□ 0.83
LTBR-215ENST00000546296 UNCXA6NJT0 531 aa20.24■□□□□ 0.83
LTBR-215ENST00000546296 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
LTBR-215ENST00000546296 ANKRD13AQ8IZ07 590 aa20.24■□□□□ 0.83
LTBR-215ENST00000546296 OSBP2Q969R2 916 aa20.24■□□□□ 0.83
LTBR-215ENST00000546296 PALD1Q9ULE6 856 aa20.24■□□□□ 0.83
LTBR-215ENST00000546296 HLA-DOAP06340 250 aa20.23■□□□□ 0.83
LTBR-215ENST00000546296 DDRGK1Q96HY6 314 aa20.23■□□□□ 0.83
LTBR-215ENST00000546296 WRNIP1Q96S55 665 aa20.23■□□□□ 0.83
LTBR-215ENST00000546296 TRIM34Q9BYJ4 488 aa20.23■□□□□ 0.83
LTBR-215ENST00000546296 PI4KBQ9UBF8 816 aa20.23■□□□□ 0.83
LTBR-215ENST00000546296 CSADQ9Y600 493 aa20.23■□□□□ 0.83
LTBR-215ENST00000546296 SLC4A4Q9Y6R1 1079 aa20.23■□□□□ 0.83
LTBR-215ENST00000546296 ATRNL1Q5VV63 1379 aa20.22■□□□□ 0.83
LTBR-215ENST00000546296 PRKAB2O43741 272 aa20.22■□□□□ 0.83
LTBR-215ENST00000546296 POLR3DP05423 398 aaPredicted RBP20.22■□□□□ 0.83
LTBR-215ENST00000546296 SLC4A8Q2Y0W8 1093 aa20.22■□□□□ 0.83
LTBR-215ENST00000546296 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.22■□□□□ 0.83
LTBR-215ENST00000546296 SDR42E1Q8WUS8 393 aa20.22■□□□□ 0.83
LTBR-215ENST00000546296 CLMNQ96JQ2 1002 aa20.22■□□□□ 0.83
LTBR-215ENST00000546296 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.83
LTBR-215ENST00000546296 M0R2C6 588 aa20.21■□□□□ 0.83
LTBR-215ENST00000546296 AOC2O75106 756 aa20.21■□□□□ 0.83
LTBR-215ENST00000546296 ZMYM1Q5SVZ6 1142 aa20.21■□□□□ 0.83
LTBR-215ENST00000546296 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
LTBR-215ENST00000546296 TICAM2Q86XR7 235 aa20.21■□□□□ 0.83
LTBR-215ENST00000546296 CRACR2BQ8N4Y2 399 aaPredicted RBP20.21■□□□□ 0.83
LTBR-215ENST00000546296 STRBPQ96SI9 672 aaKnown RBP20.21■□□□□ 0.83
LTBR-215ENST00000546296 ELP3Q9H9T3 547 aa20.21■□□□□ 0.83
LTBR-215ENST00000546296 ATP8A2Q9NTI2 1148 aa20.21■□□□□ 0.83
LTBR-215ENST00000546296 MCM9Q9NXL9 1143 aa20.21■□□□□ 0.83
LTBR-215ENST00000546296 COL2A1P02458 1487 aaPredicted RBP20.2■□□□□ 0.82
LTBR-215ENST00000546296 GPAA1O43292 621 aa20.2■□□□□ 0.82
LTBR-215ENST00000546296 SLC10A3P09131 477 aa20.2■□□□□ 0.82
LTBR-215ENST00000546296 NOGQ13253 232 aa20.2■□□□□ 0.82
LTBR-215ENST00000546296 VGLL4Q14135 290 aa20.2■□□□□ 0.82
LTBR-215ENST00000546296 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.2■□□□□ 0.82
LTBR-215ENST00000546296 TTC6Q86TZ1 520 aa20.2■□□□□ 0.82
LTBR-215ENST00000546296 RASAL3Q86YV0 1011 aa20.2■□□□□ 0.82
LTBR-215ENST00000546296 FOXP4Q8IVH2 680 aaPredicted RBP20.2■□□□□ 0.82
LTBR-215ENST00000546296 ZKSCAN4Q969J2 545 aaPredicted RBP20.2■□□□□ 0.82
LTBR-215ENST00000546296 SEC62Q99442 399 aaKnown RBP20.2■□□□□ 0.82
LTBR-215ENST00000546296 TBC1D12O60347 775 aa20.19■□□□□ 0.82
LTBR-215ENST00000546296 APPP05067 770 aa20.19■□□□□ 0.82
LTBR-215ENST00000546296 SLURP2P0DP57 97 aa20.19■□□□□ 0.82
LTBR-215ENST00000546296 GNAT2P19087 354 aa20.19■□□□□ 0.82
LTBR-215ENST00000546296 INPP5BP32019 993 aa20.19■□□□□ 0.82
LTBR-215ENST00000546296 MAP2K2P36507 400 aa20.19■□□□□ 0.82
LTBR-215ENST00000546296 MAP3K10Q02779 954 aa20.19■□□□□ 0.82
LTBR-215ENST00000546296 MKRN3Q13064 507 aaKnown RBP20.19■□□□□ 0.82
LTBR-215ENST00000546296 DCP1AQ9NPI6 582 aaPredicted RBP20.19■□□□□ 0.82
LTBR-215ENST00000546296 HERC5Q9UII4 1024 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms