RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 LRRC2Q9BYS8 371 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 U3KPZ7 1027 aaPredicted RBP9.01□□□□□ -0.97
UBR1-202ENST00000546274 A0A087WWV3 80 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 EFCAB8A8MWE9 144 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 ZC3H6P61129 1189 aaKnown RBP9.01□□□□□ -0.97
UBR1-202ENST00000546274 FOXO4P98177 505 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 KRT28Q7Z3Y7 464 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 NSUN7Q8NE18 718 aaKnown RBP9.01□□□□□ -0.97
UBR1-202ENST00000546274 AGXT2Q9BYV1 514 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 FTOQ9C0B1 505 aaKnown RBP eCLIP9.01□□□□□ -0.97
UBR1-202ENST00000546274 SALL1Q9NSC2 1324 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 ATP5J2-PTCD1G3V325 749 aa9□□□□□ -0.97
UBR1-202ENST00000546274 PFKFB2O60825 505 aa9□□□□□ -0.97
UBR1-202ENST00000546274 PTCD1O75127 700 aaKnown RBP9□□□□□ -0.97
UBR1-202ENST00000546274 PPFIA4O75335 1185 aa9□□□□□ -0.97
UBR1-202ENST00000546274 AP1G2O75843 785 aa9□□□□□ -0.97
UBR1-202ENST00000546274 PEX19P40855 299 aa9□□□□□ -0.97
UBR1-202ENST00000546274 IQCB1Q15051 598 aa9□□□□□ -0.97
UBR1-202ENST00000546274 HSP90B2PQ58FF3 399 aa9□□□□□ -0.97
UBR1-202ENST00000546274 JAKMIP3Q5VZ66 844 aa9□□□□□ -0.97
UBR1-202ENST00000546274 ATG9AQ7Z3C6 839 aa9□□□□□ -0.97
UBR1-202ENST00000546274 FMNL3Q8IVF7 1028 aa9□□□□□ -0.97
UBR1-202ENST00000546274 TEX11Q8IYF3 940 aa9□□□□□ -0.97
UBR1-202ENST00000546274 GOLPH3LQ9H4A5 285 aa9□□□□□ -0.97
UBR1-202ENST00000546274 SUGCTQ9HAC7 445 aa9□□□□□ -0.97
UBR1-202ENST00000546274 MYH7P12883 1935 aa9□□□□□ -0.97
UBR1-202ENST00000546274 EME2A4GXA9 379 aaPredicted RBP9□□□□□ -0.97
UBR1-202ENST00000546274 EXOC5O00471 708 aa9□□□□□ -0.97
UBR1-202ENST00000546274 CYP27B1O15528 508 aa9□□□□□ -0.97
UBR1-202ENST00000546274 SNRPA1P09661 255 aaKnown RBP9□□□□□ -0.97
UBR1-202ENST00000546274 ETF1P62495 437 aaKnown RBP9□□□□□ -0.97
UBR1-202ENST00000546274 IRX1P78414 480 aaPredicted RBP9□□□□□ -0.97
UBR1-202ENST00000546274 EXOSC10Q01780 885 aaKnown RBP9□□□□□ -0.97
UBR1-202ENST00000546274 TBC1D8BQ0IIM8 1120 aa9□□□□□ -0.97
UBR1-202ENST00000546274 PSMD2Q13200 908 aa9□□□□□ -0.97
UBR1-202ENST00000546274 OTUD6BQ8N6M0 293 aa9□□□□□ -0.97
UBR1-202ENST00000546274 KBTBD3Q8NAB2 608 aa9□□□□□ -0.97
UBR1-202ENST00000546274 NUCKS1Q9H1E3 243 aaKnown RBP9□□□□□ -0.97
UBR1-202ENST00000546274 ODF2LQ9ULJ1 636 aa9□□□□□ -0.97
UBR1-202ENST00000546274 C4AP0C0L4 1744 aa9□□□□□ -0.97
UBR1-202ENST00000546274 C4BP0C0L5 1744 aa9□□□□□ -0.97
UBR1-202ENST00000546274 ECM29Q5VYK3 1845 aa9□□□□□ -0.97
UBR1-202ENST00000546274 CCT5P48643 541 aa9□□□□□ -0.97
UBR1-202ENST00000546274 C11orf57Q6ZUT1 292 aaPredicted RBP9□□□□□ -0.97
UBR1-202ENST00000546274 CLIC6Q96NY7 704 aa9□□□□□ -0.97
UBR1-202ENST00000546274 SHANK3Q9BYB0 1731 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 SPATA31A3Q5VYP0 1347 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 A0A087WZG4 1122 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 BICD2Q8TD16 824 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 RAPGEF4Q8WZA2 1011 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 LLPHQ9BRT6 129 aaKnown RBP8.99□□□□□ -0.97
UBR1-202ENST00000546274 CENPHQ9H3R5 247 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.99□□□□□ -0.975e-7■■■■□ 22.7
UBR1-202ENST00000546274 RPS6KA5O75582 802 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 IPO7O95373 1038 aaKnown RBP8.99□□□□□ -0.97
UBR1-202ENST00000546274 GCKP35557 465 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 LRRFIP1Q32MZ4 808 aaKnown RBP8.99□□□□□ -0.97
UBR1-202ENST00000546274 GPR161Q8N6U8 529 aaKnown RBP8.99□□□□□ -0.97
UBR1-202ENST00000546274 FAM204AQ9H8W3 233 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 RCOR1Q9UKL0 485 aa8.99□□□□□ -0.97
UBR1-202ENST00000546274 ABCA3Q99758 1704 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 CCT2P78371 535 aaKnown RBP8.98□□□□□ -0.97
UBR1-202ENST00000546274 SNX1Q13596 522 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 NAA16Q6N069 864 aaPredicted RBP8.98□□□□□ -0.97
UBR1-202ENST00000546274 DHX32Q7L7V1 743 aaKnown RBP8.98□□□□□ -0.97
UBR1-202ENST00000546274 ENGASEQ8NFI3 743 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 NLRP2Q9NX02 1062 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 ETAA1Q9NY74 926 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 CAPN7Q9Y6W3 813 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 FAM169AQ9Y6X4 670 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 PTPDC1A2A3K4 754 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 NBPF26B4DH59 902 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 MYO1FO00160 1098 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 C21orf2O43822 256 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 GCFC2P16383 781 aaKnown RBP8.98□□□□□ -0.97
UBR1-202ENST00000546274 GPTP24298 496 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 CDC25BP30305 580 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 CEBPZQ03701 1054 aaKnown RBP8.98□□□□□ -0.97
UBR1-202ENST00000546274 NBPF14Q5TI25 921 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 LMBR1LQ6UX01 489 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 CEP57Q86XR8 500 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 IFNL2Q8IZJ0 200 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 NBPF15Q8N660 670 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 PLBD2Q8NHP8 589 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 CFAP45Q9UL16 551 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 KCPQ6ZWJ8 1503 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 H3BQV1 296 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 H7C1W4 665 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 TATP17735 454 aaPredicted RBP8.98□□□□□ -0.97
UBR1-202ENST00000546274 INPP5BP32019 993 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 CLNS1AP54105 237 aaKnown RBP8.98□□□□□ -0.97
UBR1-202ENST00000546274 IFFO2Q5TF58 517 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 SARM1Q6SZW1 724 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 DCAF5Q96JK2 942 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 USP28Q96RU2 1077 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 DSCC1Q9BVC3 393 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 PAG1Q9NWQ8 432 aa8.98□□□□□ -0.97
UBR1-202ENST00000546274 FOXP2O15409 715 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 EIF3JO75822 258 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 MYBL2P10244 700 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms