RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.9■□□□□ 0.62
CLPTM1-203ENST00000546079 MROH7-TTC4A0A0A0MT08 1334 aa18.9■□□□□ 0.62
CLPTM1-203ENST00000546079 PRAMEF22A3QJZ6 481 aa18.9■□□□□ 0.62
CLPTM1-203ENST00000546079 PHKG2P15735 406 aa18.9■□□□□ 0.62
CLPTM1-203ENST00000546079 TATP17735 454 aaPredicted RBP18.9■□□□□ 0.62
CLPTM1-203ENST00000546079 SART3Q15020 963 aaKnown RBP18.9■□□□□ 0.62
CLPTM1-203ENST00000546079 OTUD7BQ6GQQ9 843 aa18.9■□□□□ 0.62
CLPTM1-203ENST00000546079 PNOCQ13519 176 aa18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 PANX2Q96RD6 677 aa18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 DSCC1Q9BVC3 393 aa18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 ADGRG1Q9Y653 693 aa18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 SH3TC1Q8TE82 1336 aa18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 ANKRD65E5RJM6 399 aa18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 PHACTR2O75167 634 aa18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 ZNF18P17022 549 aa18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 AARSP49588 968 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 PROSER3Q2NL68 480 aa18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 DBNLQ9UJU6 430 aaKnown RBP18.89■□□□□ 0.61
CLPTM1-203ENST00000546079 C5P01031 1676 aa18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 E7EWF7 191 aa18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 WDR93Q6P2C0 686 aa18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 LZTFL1Q9NQ48 299 aa18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 LRRIQ3A6PVS8 624 aaPredicted RBP18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 CHGBP05060 677 aa18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 CSB-PGBD3P0DP91 1061 aa18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 PIP4K2BP78356 416 aa18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 GPATCH11Q8N954 259 aa18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 CTCFLQ8NI51 663 aaPredicted RBP18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 NAA15Q9BXJ9 866 aaKnown RBP18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 SLC52A2Q9HAB3 445 aa18.88■□□□□ 0.61
CLPTM1-203ENST00000546079 CTAGE9A4FU28 777 aa18.87■□□□□ 0.61
CLPTM1-203ENST00000546079 PPP6R2O75170 966 aa18.87■□□□□ 0.61
CLPTM1-203ENST00000546079 MTF1Q14872 753 aa18.87■□□□□ 0.61
CLPTM1-203ENST00000546079 E2F4Q16254 413 aa18.87■□□□□ 0.61
CLPTM1-203ENST00000546079 WHAMMP3Q1A5X7 153 aa18.87■□□□□ 0.61
CLPTM1-203ENST00000546079 AFAP1L1Q8TED9 768 aa18.87■□□□□ 0.61
CLPTM1-203ENST00000546079 HAUS7Q99871 368 aa18.87■□□□□ 0.61
CLPTM1-203ENST00000546079 CTAGE15A4D2H0 777 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 RNF40O75150 1001 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 RHOXF2BP0C7M4 288 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 CTAGE8P0CG41 777 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 KIF4BQ2VIQ3 1234 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 SHC4Q6S5L8 630 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 CTAGE6Q86UF2 777 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 FOXP4Q8IVH2 680 aaPredicted RBP18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 CTAGE4Q8IX94 777 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 ELOA2Q8IYF1 753 aaPredicted RBP18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 JMYQ8N9B5 988 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 RHOXF2Q9BQY4 288 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 SOS2Q07890 1332 aaPredicted RBP18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 PRPF6O94906 941 aaKnown RBP18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 MARCKSP29966 332 aaPredicted RBP18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 KIF23Q02241 960 aaPredicted RBP18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 PDE4BQ07343 736 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 METTL16Q86W50 562 aaKnown RBP18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 PCDHA5Q9Y5H7 936 aa18.86■□□□□ 0.61
CLPTM1-203ENST00000546079 SOWAHDA6NJG2 315 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 KIF28PB7ZC32 967 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 AKR1B15C9JRZ8 316 aaPredicted RBP18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 BMP6P22004 513 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 ZNF569Q5MCW4 686 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 MICALL1Q8N3F8 863 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 HELLSQ9NRZ9 838 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 RAI14Q9P0K7 980 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 CLGNO14967 610 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 CYP27B1O15528 508 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 SYF2O95926 243 aaKnown RBP18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 NR1I3Q14994 352 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 TNNI3KQ59H18 835 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 CCDC102BQ68D86 513 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 KBTBD3Q8NAB2 608 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 ENOX1Q8TC92 643 aaKnown RBP18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 FPGT-TNNI3KV9GXZ4 949 aa18.85■□□□□ 0.61
CLPTM1-203ENST00000546079 CDC27P30260 824 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 SLC39A6Q13433 755 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 RESP18Q5W5W9 173 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 RASGRP2Q7LDG7 609 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 TICAM2Q86XR7 235 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 CXorf56Q9H5V9 222 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 NFE2L3Q9Y4A8 694 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 LAMA4Q16363 1823 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 ABCA3Q99758 1704 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 ERLIN2O94905 339 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 PLEKHA4Q9H4M7 779 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 SLAIN2Q9P270 581 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 NDUFB9Q9Y6M9 179 aa18.84■□□□□ 0.61
CLPTM1-203ENST00000546079 SHOX2O60902 331 aaPredicted RBP18.83■□□□□ 0.61
CLPTM1-203ENST00000546079 CCDC172P0C7W6 258 aa18.83■□□□□ 0.61
CLPTM1-203ENST00000546079 PDIA6Q15084 440 aa18.83■□□□□ 0.61
CLPTM1-203ENST00000546079 NUTM2AQ8IVF1 878 aaPredicted RBP18.83■□□□□ 0.61
CLPTM1-203ENST00000546079 COPRSQ9NQ92 184 aa18.83■□□□□ 0.61
CLPTM1-203ENST00000546079 PARP4Q9UKK3 1724 aaKnown RBP18.83■□□□□ 0.6
CLPTM1-203ENST00000546079 EXOC5O00471 708 aa18.83■□□□□ 0.6
CLPTM1-203ENST00000546079 LONRF3Q496Y0 759 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms