RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.06■□□□□ 0.96
CD9-211ENST00000546073 UBE2Q2LH0YL09 131 aa21.05■□□□□ 0.96
CD9-211ENST00000546073 RHBDL3P58872 404 aa21.05■□□□□ 0.96
CD9-211ENST00000546073 RPAP1Q9BWH6 1393 aaPredicted RBP21.05■□□□□ 0.96
CD9-211ENST00000546073 WDHD1O75717 1129 aaPredicted RBP21.04■□□□□ 0.96
CD9-211ENST00000546073 DYNLL1P63167 89 aaKnown RBP21.04■□□□□ 0.96
CD9-211ENST00000546073 MAPKAPK5Q8IW41 473 aa21.04■□□□□ 0.96
CD9-211ENST00000546073 PLEKHM2Q8IWE5 1019 aa21.04■□□□□ 0.96
CD9-211ENST00000546073 CRACR2BQ8N4Y2 399 aaPredicted RBP21.04■□□□□ 0.96
CD9-211ENST00000546073 ZNF384Q8TF68 577 aa21.04■□□□□ 0.96
CD9-211ENST00000546073 APPBP2Q92624 585 aa21.04■□□□□ 0.96
CD9-211ENST00000546073 CAPNS2Q96L46 248 aa21.04■□□□□ 0.96
CD9-211ENST00000546073 BEGAINQ9BUH8 593 aa21.04■□□□□ 0.96
CD9-211ENST00000546073 OSBPL5Q9H0X9 879 aaPredicted RBP21.04■□□□□ 0.96
CD9-211ENST00000546073 OSBPL3Q9H4L5 887 aa21.04■□□□□ 0.96
CD9-211ENST00000546073 FAM198AQ9UFP1 575 aa21.04■□□□□ 0.96
CD9-211ENST00000546073 CNTNAP1P78357 1384 aa21.04■□□□□ 0.96
CD9-211ENST00000546073 HIP1O00291 1037 aa21.03■□□□□ 0.96
CD9-211ENST00000546073 POLR3DP05423 398 aaPredicted RBP21.03■□□□□ 0.96
CD9-211ENST00000546073 MAP3K9P80192 1104 aa21.03■□□□□ 0.96
CD9-211ENST00000546073 TTC6Q86TZ1 520 aa21.03■□□□□ 0.96
CD9-211ENST00000546073 PI4KBQ9UBF8 816 aa21.03■□□□□ 0.96
CD9-211ENST00000546073 GNAT2P19087 354 aa21.02■□□□□ 0.96
CD9-211ENST00000546073 NOGQ13253 232 aa21.02■□□□□ 0.96
CD9-211ENST00000546073 ADGRA1Q86SQ6 560 aa21.02■□□□□ 0.96
CD9-211ENST00000546073 TEPSINQ96N21 525 aa21.02■□□□□ 0.96
CD9-211ENST00000546073 PPP4R2Q9NY27 417 aa21.02■□□□□ 0.96
CD9-211ENST00000546073 SALL3Q9BXA9 1300 aa21.02■□□□□ 0.95
CD9-211ENST00000546073 WDR33Q9C0J8 1336 aaKnown RBP21.02■□□□□ 0.95
CD9-211ENST00000546073 MBD4O95243 580 aa21.01■□□□□ 0.95
CD9-211ENST00000546073 APPP05067 770 aa21.01■□□□□ 0.95
CD9-211ENST00000546073 MAP3K11Q16584 847 aa21.01■□□□□ 0.95
CD9-211ENST00000546073 CYP4F22Q6NT55 531 aa21.01■□□□□ 0.95
CD9-211ENST00000546073 MIGA2Q7L4E1 593 aa21.01■□□□□ 0.95
CD9-211ENST00000546073 FOXP4Q8IVH2 680 aaPredicted RBP21.01■□□□□ 0.95
CD9-211ENST00000546073 REM2Q8IYK8 340 aaPredicted RBP21.01■□□□□ 0.95
CD9-211ENST00000546073 WRNIP1Q96S55 665 aa21.01■□□□□ 0.95
CD9-211ENST00000546073 NACAP1Q9BZK3 213 aa21.01■□□□□ 0.95
CD9-211ENST00000546073 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.01■□□□□ 0.95
CD9-211ENST00000546073 ATP8A2Q9NTI2 1148 aa21.01■□□□□ 0.95
CD9-211ENST00000546073 MYH2Q9UKX2 1941 aa21.01■□□□□ 0.95
CD9-211ENST00000546073 USP2O75604 605 aaPredicted RBP21■□□□□ 0.95
CD9-211ENST00000546073 VEGFBP49765 207 aa21■□□□□ 0.95
CD9-211ENST00000546073 MFAP1P55081 439 aaKnown RBP21■□□□□ 0.95
CD9-211ENST00000546073 ARMT1Q9H993 441 aa21■□□□□ 0.95
CD9-211ENST00000546073 HERC5Q9UII4 1024 aaKnown RBP21■□□□□ 0.95
CD9-211ENST00000546073 SLC4A4Q9Y6R1 1079 aa21■□□□□ 0.95
CD9-211ENST00000546073 FLT1P17948 1338 aa21■□□□□ 0.95
CD9-211ENST00000546073 AKAP11Q9UKA4 1901 aa21■□□□□ 0.95
CD9-211ENST00000546073 TCRBV5S4A2TA0A5A2 114 aa20.99■□□□□ 0.95
CD9-211ENST00000546073 MAP2K2P36507 400 aa20.99■□□□□ 0.95
CD9-211ENST00000546073 MAP2K1Q02750 393 aaPredicted RBP20.99■□□□□ 0.95
CD9-211ENST00000546073 MOB2Q70IA6 237 aa20.99■□□□□ 0.95
CD9-211ENST00000546073 RIOK1Q9BRS2 568 aaKnown RBP20.99■□□□□ 0.95
CD9-211ENST00000546073 DDX4Q9NQI0 724 aaKnown RBP20.99■□□□□ 0.95
CD9-211ENST00000546073 PICK1Q9NRD5 415 aa20.99■□□□□ 0.95
CD9-211ENST00000546073 DIAPH3Q9NSV4 1193 aa20.99■□□□□ 0.95
CD9-211ENST00000546073 MCM9Q9NXL9 1143 aa20.99■□□□□ 0.95
CD9-211ENST00000546073 ECM29Q5VYK3 1845 aa20.99■□□□□ 0.95
CD9-211ENST00000546073 TRPM7Q96QT4 1865 aa20.98■□□□□ 0.95
CD9-211ENST00000546073 MAST2Q6P0Q8 1798 aa20.98■□□□□ 0.95
CD9-211ENST00000546073 SAP30BPQ9UHR5 308 aaKnown RBP20.98■□□□□ 0.95
CD9-211ENST00000546073 PAPPA2Q9BXP8 1791 aa20.97■□□□□ 0.95
CD9-211ENST00000546073 POLR2AP24928 1970 aaKnown RBP20.97■□□□□ 0.95
CD9-211ENST00000546073 DDTLA6NHG4 134 aaPredicted RBP20.97■□□□□ 0.95
CD9-211ENST00000546073 TBC1D12O60347 775 aa20.97■□□□□ 0.95
CD9-211ENST00000546073 LDLRAD1Q5T700 205 aa20.97■□□□□ 0.95
CD9-211ENST00000546073 ZFPM1Q8IX07 1006 aa20.97■□□□□ 0.95
CD9-211ENST00000546073 LCORLQ8N3X6 602 aa20.97■□□□□ 0.95
CD9-211ENST00000546073 DNAJC5GQ8N7S2 189 aa20.97■□□□□ 0.95
CD9-211ENST00000546073 PUS7LQ9H0K6 701 aaKnown RBP20.96■□□□□ 0.95
CD9-211ENST00000546073 HELLSQ9NRZ9 838 aa20.96■□□□□ 0.95
CD9-211ENST00000546073 PALD1Q9ULE6 856 aa20.96■□□□□ 0.95
CD9-211ENST00000546073 ATRNL1Q5VV63 1379 aa20.96■□□□□ 0.95
CD9-211ENST00000546073 SLC10A3P09131 477 aa20.95■□□□□ 0.94
CD9-211ENST00000546073 TDO2P48775 406 aa20.95■□□□□ 0.94
CD9-211ENST00000546073 SREBF2Q12772 1141 aa20.95■□□□□ 0.94
CD9-211ENST00000546073 TTC22Q5TAA0 569 aa20.95■□□□□ 0.94
CD9-211ENST00000546073 RUFY2Q8WXA3 655 aa20.95■□□□□ 0.94
CD9-211ENST00000546073 ELP3Q9H9T3 547 aa20.95■□□□□ 0.94
CD9-211ENST00000546073 TAOK2Q9UL54 1235 aa20.95■□□□□ 0.94
CD9-211ENST00000546073 COL2A1P02458 1487 aaPredicted RBP20.94■□□□□ 0.94
CD9-211ENST00000546073 GPAA1O43292 621 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 CTNND1O60716 968 aaKnown RBP20.94■□□□□ 0.94
CD9-211ENST00000546073 SLC3A2P08195 630 aaKnown RBP20.94■□□□□ 0.94
CD9-211ENST00000546073 ZBTB48P10074 688 aaPredicted RBP20.94■□□□□ 0.94
CD9-211ENST00000546073 INHBEP58166 350 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 OTUD7BQ6GQQ9 843 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 GIMAP6Q6P9H5 292 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 ERO1BQ86YB8 467 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.94■□□□□ 0.94
CD9-211ENST00000546073 SDR42E1Q8WUS8 393 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 ZNF287Q9HBT7 754 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 SERPINB13Q9UIV8 391 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 FZD1Q9UP38 647 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 RFX7Q2KHR2 1363 aa20.94■□□□□ 0.94
CD9-211ENST00000546073 VGLL4Q14135 290 aa20.93■□□□□ 0.94
CD9-211ENST00000546073 MCMDC2Q4G0Z9 681 aa20.93■□□□□ 0.94
CD9-211ENST00000546073 ZMYM1Q5SVZ6 1142 aa20.93■□□□□ 0.94
CD9-211ENST00000546073 RASAL3Q86YV0 1011 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms