RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 NFIAQ12857 509 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 LRRFIP1Q32MZ4 808 aaKnown RBP12.36□□□□□ -0.43
LINC00939-203ENST00000545784 GLIPR1L2Q4G1C9 344 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 MAP1SQ66K74 1059 aaPredicted RBP12.36□□□□□ -0.43
LINC00939-203ENST00000545784 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 DLK2Q6UY11 383 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 FAM227BQ96M60 508 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 SEC62Q99442 399 aaKnown RBP12.36□□□□□ -0.43
LINC00939-203ENST00000545784 FAM198AQ9UFP1 575 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 CLEC11AQ9Y240 323 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 CNTNAP1P78357 1384 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 M0R2C6 588 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
LINC00939-203ENST00000545784 TOMM70O94826 608 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 CCDC173Q0VFZ6 552 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 KLHL40Q2TBA0 621 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 CASC1Q6TDU7 716 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 LCORLQ8N3X6 602 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
LINC00939-203ENST00000545784 DCPSQ96C86 337 aaKnown RBP12.36□□□□□ -0.43
LINC00939-203ENST00000545784 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
LINC00939-203ENST00000545784 DDX4Q9NQI0 724 aaKnown RBP12.36□□□□□ -0.43
LINC00939-203ENST00000545784 MYH2Q9UKX2 1941 aa12.36□□□□□ -0.43
LINC00939-203ENST00000545784 A0A0D9SFI3 127 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 MBD4O95243 580 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 PLCG2P16885 1265 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 CHMLP26374 656 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
LINC00939-203ENST00000545784 USP48Q86UV5 1035 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 CERS3Q8IU89 383 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 NAP1L5Q96NT1 182 aaPredicted RBP12.35□□□□□ -0.43
LINC00939-203ENST00000545784 GLIS2Q9BZE0 524 aaPredicted RBP12.35□□□□□ -0.43
LINC00939-203ENST00000545784 ARMT1Q9H993 441 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 VEZTQ9HBM0 779 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 HELLSQ9NRZ9 838 aa12.35□□□□□ -0.43
LINC00939-203ENST00000545784 MKRN1Q9UHC7 482 aaKnown RBP12.35□□□□□ -0.43
LINC00939-203ENST00000545784 TCP10L2B9ZVM9 353 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 PRKAB2O43741 272 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 KRT26Q7Z3Y9 468 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 TEX11Q8IYF3 940 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 DEFB129Q9H1M3 183 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 MAST2Q6P0Q8 1798 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 ADM5C9JUS6 153 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 RASA3Q14644 834 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 FAM83AQ86UY5 434 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 APOBEC3FQ8IUX4 373 aaKnown RBP12.34□□□□□ -0.43
LINC00939-203ENST00000545784 TEPSINQ96N21 525 aa12.34□□□□□ -0.43
LINC00939-203ENST00000545784 NOL10Q9BSC4 688 aaKnown RBP12.34□□□□□ -0.43
LINC00939-203ENST00000545784 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
LINC00939-203ENST00000545784 HIP1O00291 1037 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 FOXP2O15409 715 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 GPAA1O43292 621 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 PRAMEF18Q5VWM3 479 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 CCDC129Q6ZRS4 1044 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 SH3BP5LQ7L8J4 393 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 SULF1Q8IWU6 871 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 TGFBRAP1Q8WUH2 860 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 FAM151AQ8WW52 585 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 TMEM39BQ9GZU3 492 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 IL25Q9H293 177 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 TRAF5O00463 557 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 ENTPD3O75355 529 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 FMR1Q06787 632 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC00939-203ENST00000545784 CWC27Q6UX04 472 aaKnown RBP12.33□□□□□ -0.44
LINC00939-203ENST00000545784 ZNF589Q86UQ0 364 aaPredicted RBP12.33□□□□□ -0.44
LINC00939-203ENST00000545784 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 AIDAQ96BJ3 306 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 TMOD2Q9NZR1 351 aa12.33□□□□□ -0.44
LINC00939-203ENST00000545784 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
LINC00939-203ENST00000545784 TCP10Q12799 353 aa12.32□□□□□ -0.44
LINC00939-203ENST00000545784 TNFAIP1Q13829 316 aa12.32□□□□□ -0.44
LINC00939-203ENST00000545784 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
LINC00939-203ENST00000545784 CRNKL1Q9BZJ0 848 aaKnown RBP12.32□□□□□ -0.44
LINC00939-203ENST00000545784 DIAPH3Q9NSV4 1193 aa12.32□□□□□ -0.44
LINC00939-203ENST00000545784 PPP2R3BQ9Y5P8 575 aa12.32□□□□□ -0.44
LINC00939-203ENST00000545784 FLT1P17948 1338 aa12.32□□□□□ -0.44
LINC00939-203ENST00000545784 PASKQ96RG2 1323 aa12.32□□□□□ -0.44
LINC00939-203ENST00000545784 RRP9O43818 475 aaKnown RBP12.31□□□□□ -0.44
LINC00939-203ENST00000545784 ST18O60284 1047 aa12.31□□□□□ -0.44
LINC00939-203ENST00000545784 FSTL1Q12841 308 aa12.31□□□□□ -0.44
LINC00939-203ENST00000545784 MAPKAPK5Q8IW41 473 aa12.31□□□□□ -0.44
LINC00939-203ENST00000545784 OSBPL5Q9H0X9 879 aaPredicted RBP12.31□□□□□ -0.44
LINC00939-203ENST00000545784 SLC4A4Q9Y6R1 1079 aa12.31□□□□□ -0.44
LINC00939-203ENST00000545784 DDTLA6NHG4 134 aaPredicted RBP12.31□□□□□ -0.44
LINC00939-203ENST00000545784 PICALMQ13492 652 aa12.31□□□□□ -0.44
LINC00939-203ENST00000545784 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
LINC00939-203ENST00000545784 SDR42E1Q8WUS8 393 aa12.31□□□□□ -0.44
LINC00939-203ENST00000545784 CDCA5Q96FF9 252 aa12.31□□□□□ -0.44
LINC00939-203ENST00000545784 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
LINC00939-203ENST00000545784 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
LINC00939-203ENST00000545784 PATL2C9JE40 543 aaKnown RBP12.3□□□□□ -0.44
LINC00939-203ENST00000545784 REC8O95072 547 aa12.3□□□□□ -0.44
LINC00939-203ENST00000545784 BAG4O95429 457 aaKnown RBP12.3□□□□□ -0.44
LINC00939-203ENST00000545784 GNAT2P19087 354 aa12.3□□□□□ -0.44
LINC00939-203ENST00000545784 TNNI2P48788 182 aa12.3□□□□□ -0.44
LINC00939-203ENST00000545784 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms