RNA–Protein interactions for RNA: ENST00000545620.5

SMAD5-212, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD5, Length 6,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-212ENST00000545620 NIP7Q9Y221 180 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMAD5-212ENST00000545620 MAST2Q6P0Q8 1798 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 STX6O43752 255 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 NR1I2O75469 434 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 GUCY1B3Q02153 619 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 NEXNQ0ZGT2 675 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 FAM43AQ8N2R8 423 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 SRRTQ9BXP5 876 aaKnown RBP5.55□□□□□ -1.52
SMAD5-212ENST00000545620 CIZ1Q9ULV3 898 aaPredicted RBP5.55□□□□□ -1.52
SMAD5-212ENST00000545620 AFF2P51816 1311 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 GOLGA6L10A0A0M3HER8 536 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 GOLGA6L10A6NI86 522 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 BMP6P22004 513 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 FOXP4Q8IVH2 680 aaPredicted RBP5.55□□□□□ -1.52
SMAD5-212ENST00000545620 TMEM87AQ8NBN3 555 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 ALDH8A1Q9H2A2 487 aaPredicted RBP5.55□□□□□ -1.52
SMAD5-212ENST00000545620 ARMT1Q9H993 441 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 TFCP2L1Q9NZI6 479 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 ZSWIM5Q9P217 1185 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 FRYLO94915 3013 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 ZSCAN22P10073 491 aaPredicted RBP5.55□□□□□ -1.52
SMAD5-212ENST00000545620 TOB1P50616 345 aaPredicted RBP5.55□□□□□ -1.52
SMAD5-212ENST00000545620 ZNF445P59923 1031 aa5.55□□□□□ -1.52
SMAD5-212ENST00000545620 QSER1Q2KHR3 1735 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 hCG_1642624A0A1W2PR95 340 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 RNF113AO15541 343 aaKnown RBP5.54□□□□□ -1.52
SMAD5-212ENST00000545620 WDHD1O75717 1129 aaPredicted RBP5.54□□□□□ -1.52
SMAD5-212ENST00000545620 GJD4Q96KN9 370 aaPredicted RBP5.54□□□□□ -1.52
SMAD5-212ENST00000545620 IFIT1P09914 478 aaKnown RBP5.54□□□□□ -1.52
SMAD5-212ENST00000545620 GYS1P13807 737 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 FAM160A1Q05DH4 1040 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.54□□□□□ -1.52
SMAD5-212ENST00000545620 KCNF1Q9H3M0 494 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 MYH1P12882 1939 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 BRCA1P38398 1863 aaKnown RBP5.54□□□□□ -1.52
SMAD5-212ENST00000545620 TYW1BQ6NUM6 668 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 GIMAP6Q6P9H5 292 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 VPS13AQ96RL7 3174 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 NAV1Q8NEY1 1877 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 TSPY2A6NKD2 308 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 PDE8AO60658 829 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 TSPY3P0CV98 308 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 TSPY8P0CW00 308 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 TSPY1Q01534 308 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 WDR66Q8TBY9 1149 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 SECISBP2LQ93073 1101 aaKnown RBP5.54□□□□□ -1.52
SMAD5-212ENST00000545620 PHKBQ93100 1093 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 LY9Q9HBG7 655 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 DIAPH3Q9NSV4 1193 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 USP21Q9UK80 565 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 ATP2B3Q16720 1220 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 SLC9C2Q5TAH2 1124 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 LEKR1Q6ZMV7 388 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 USP49Q70CQ1 688 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 CCDC144CPQ8IYA2 1237 aa5.54□□□□□ -1.52
SMAD5-212ENST00000545620 ZNF830Q96NB3 372 aaPredicted RBP5.54□□□□□ -1.52
SMAD5-212ENST00000545620 RBBP6Q7Z6E9 1792 aaKnown RBP5.53□□□□□ -1.52
SMAD5-212ENST00000545620 A0A087X0B3 334 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 RCSD1Q6JBY9 416 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 RUFY1Q96T51 708 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 THRAP3Q9Y2W1 955 aaKnown RBP5.53□□□□□ -1.52
SMAD5-212ENST00000545620 FOXN1O15353 648 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 JAG1P78504 1218 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 RNF214Q8ND24 703 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 ENGASEQ8NFI3 743 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 OXER1Q8TDS5 423 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 USP28Q96RU2 1077 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 TRIM34Q9BYJ4 488 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 IL17RBQ9NRM6 502 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 POLLQ9UGP5 575 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 CLIC4Q9Y696 253 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 FRMD3A2A2Y4 597 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 CCP110O43303 1012 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 IFIT5Q13325 482 aaKnown RBP5.53□□□□□ -1.52
SMAD5-212ENST00000545620 ARID5BQ14865 1188 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 FAM196AQ6ZSG2 479 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 SPATA5Q8NB90 893 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 NEK1Q96PY6 1258 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 RTL9Q8NET4 1388 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 B4E1Z4 1266 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 SEPT12Q8IYM1 358 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 CERS5Q8N5B7 392 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 FAM184BQ9ULE4 1060 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 PRDM1O75626 825 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 SEC23AQ15436 765 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 PKN1Q16512 942 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 RBM26Q5T8P6 1007 aaKnown RBP5.53□□□□□ -1.52
SMAD5-212ENST00000545620 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 NGLY1Q96IV0 654 aa5.53□□□□□ -1.52
SMAD5-212ENST00000545620 ZNF512BQ96KM6 892 aaPredicted RBP5.53□□□□□ -1.52
SMAD5-212ENST00000545620 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMAD5-212ENST00000545620 RFX7Q2KHR2 1363 aa5.52□□□□□ -1.53
SMAD5-212ENST00000545620 CNTNAP4Q9C0A0 1308 aa5.52□□□□□ -1.53
SMAD5-212ENST00000545620 DIXDC1Q155Q3 683 aa5.52□□□□□ -1.53
SMAD5-212ENST00000545620 LRCH2Q5VUJ6 765 aa5.52□□□□□ -1.53
SMAD5-212ENST00000545620 CLEC10AQ8IUN9 316 aa5.52□□□□□ -1.53
SMAD5-212ENST00000545620 CPVLQ9H3G5 476 aa5.52□□□□□ -1.53
SMAD5-212ENST00000545620 CHD9Q3L8U1 2897 aa5.52□□□□□ -1.53
SMAD5-212ENST00000545620 PFKFB2O60825 505 aa5.52□□□□□ -1.53
SMAD5-212ENST00000545620 CCDC57Q2TAC2 916 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms